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| author | Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> | 2022-06-27 23:16:20 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2022-10-27 15:34:01 +0200 |
| commit | 0ad89a84c3e86093b4c17fd926a04cfc0228c6da (patch) | |
| tree | fbe9ac1d1f2a4d1196dd3d8524c2421a733a11bf | |
| parent | f31b494bb69068b5d3bdd75351c5497962e2d2fd (diff) | |
gnu: Add r-bac.
* gnu/packages/bioconductor.scm (r-bac): New variable.
| -rw-r--r-- | gnu/packages/bioconductor.scm | 24 |
1 files changed, 24 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 784ddbfae3..2e13a86774 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -2380,6 +2380,30 @@ manipulating the data from BaseSpace, it also facilitates the access to R's rich environment of statistical and data analysis tools.") (license license:asl2.0))) +(define-public r-bac + (package + (name "r-bac") + (version "1.56.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "BAC" version)) + (sha256 + (base32 + "0dkw7438d2sf6nb577dnzija54qs0nhlr47lb73li60fhlnvqmh2")))) + (properties `((upstream-name . "BAC"))) + (build-system r-build-system) + (home-page "https://bioconductor.org/packages/BAC") + (synopsis "Bayesian analysis of Chip-chip experiment") + (description + "This package uses a Bayesian hierarchical model to detect enriched +regions from ChIP-chip experiments. The common goal in analyzing this +ChIP-chip data is to detect DNA-protein interactions from ChIP-chip +experiments. The BAC package has mainly been tested with Affymetrix tiling +array data. However, we expect it to work with other platforms (e.g. Agilent, +Nimblegen, cDNA, etc.). Note that BAC does not deal with normalization, so +you will have to normalize your data beforehand.") + (license license:artistic2.0))) + (define-public r-biocversion (package (name "r-biocversion") |