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authorRicardo Wurmus <rekado@elephly.net>2020-12-17 11:39:06 +0100
committerRicardo Wurmus <rekado@elephly.net>2020-12-17 11:39:06 +0100
commitcc54848ad0a05fb306482171356a02cb7c05dfd1 (patch)
tree1946fe6837a55515eb8b7532a269a3dbffc458da
parente5610fd9f4f396a5b314d4ffa338a507eba677be (diff)
gnu: r-ideoviz: Move from "annotation" to "package" section.
* gnu/packages/bioconductor.scm (r-ideoviz): Move variable.
-rw-r--r--gnu/packages/bioconductor.scm48
1 files changed, 24 insertions, 24 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 60b09cdb65..aba7f107dc 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -748,30 +748,6 @@ annotations.")
"This is a manifest package for Illumina's EPIC methylation arrays.")
(license license:artistic2.0)))
-(define-public r-ideoviz
- (package
- (name "r-ideoviz")
- (version "1.26.0")
- (source (origin
- (method url-fetch)
- (uri (bioconductor-uri "IdeoViz" version))
- (sha256
- (base32
- "1k5c0skr6pvpcvkak9f0a088w5wsx4fl3jb9a76gyyni4nkj7djq"))))
- (build-system r-build-system)
- (propagated-inputs
- `(("r-biobase" ,r-biobase)
- ("r-iranges" ,r-iranges)
- ("r-genomicranges" ,r-genomicranges)
- ("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-rtracklayer" ,r-rtracklayer)
- ("r-genomeinfodb" ,r-genomeinfodb)))
- (home-page "https://bioconductor.org/packages/IdeoViz/")
- (synopsis "Plots data along a chromosomal ideogram")
- (description "This package provides functions to plot data associated with
-arbitrary genomic intervals along chromosomal ideogram.")
- (license license:gpl2)))
-
;; This is a CRAN package, but it depends on r-bsgenome-hsapiens-ucsc-hg19
;; from Bioconductor.
(define-public r-deconstructsigs
@@ -1289,6 +1265,30 @@ and graph-based clustering. Several utilities are also provided to compare
and evaluate clustering results.")
(license license:gpl3)))
+(define-public r-ideoviz
+ (package
+ (name "r-ideoviz")
+ (version "1.26.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "IdeoViz" version))
+ (sha256
+ (base32
+ "1k5c0skr6pvpcvkak9f0a088w5wsx4fl3jb9a76gyyni4nkj7djq"))))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-biobase" ,r-biobase)
+ ("r-iranges" ,r-iranges)
+ ("r-genomicranges" ,r-genomicranges)
+ ("r-rcolorbrewer" ,r-rcolorbrewer)
+ ("r-rtracklayer" ,r-rtracklayer)
+ ("r-genomeinfodb" ,r-genomeinfodb)))
+ (home-page "https://bioconductor.org/packages/IdeoViz/")
+ (synopsis "Plots data along a chromosomal ideogram")
+ (description "This package provides functions to plot data associated with
+arbitrary genomic intervals along chromosomal ideogram.")
+ (license license:gpl2)))
+
(define-public r-affycomp
(package
(name "r-affycomp")