diff options
| author | Ricardo Wurmus <rekado@elephly.net> | 2018-02-09 13:30:07 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2018-02-11 11:42:09 +0100 |
| commit | aba3e482b9cc239b685f81fd718a3dc49545f1f8 (patch) | |
| tree | e2d30aea61d3409db788d2ec1f6abf1c88924a7a /gnu/packages/bioinformatics.scm | |
| parent | 31c7002b466c6d09400a95bc15774f232b51ce0b (diff) | |
gnu: Add r-hdf5array.
* gnu/packages/bioinformatics.scm (r-hdf5array): New variable.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index b8c6e6ad79..9c8ff7be0c 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -10402,6 +10402,32 @@ problems in genomics, brain imaging, astrophysics, and data mining.") ;; Any version of the LGPL. (license license:lgpl3+))) +(define-public r-hdf5array + (package + (name "r-hdf5array") + (version "1.6.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "HDF5Array" version)) + (sha256 + (base32 + "0kcdza41saqv6vlpvqd841awbiwkg84lh0plx6c7fmfgbqv7a0jh")))) + (properties `((upstream-name . "HDF5Array"))) + (build-system r-build-system) + (propagated-inputs + `(("r-biocgenerics" ,r-biocgenerics) + ("r-delayedarray" ,r-delayedarray) + ("r-iranges" ,r-iranges) + ("r-rhdf5" ,r-rhdf5) + ("r-s4vectors" ,r-s4vectors))) + (home-page "https://bioconductor.org/packages/HDF5Array") + (synopsis "HDF5 back end for DelayedArray objects") + (description "This package provides an array-like container for convenient +access and manipulation of HDF5 datasets. It supports delayed operations and +block processing.") + (license license:artistic2.0))) + (define htslib-for-sambamba (let ((commit "2f3c3ea7b301f9b45737a793c0b2dcf0240e5ee5")) (package |