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| author | Leo Famulari <leo@famulari.name> | 2017-01-06 17:14:41 -0500 |
|---|---|---|
| committer | Leo Famulari <leo@famulari.name> | 2017-01-06 17:14:41 -0500 |
| commit | 74288230ea8b2310495dc2739f39ceadcc143fd0 (patch) | |
| tree | 73ba6c7c13d59c5f92b409c94dccfff159e08f4d /gnu/packages/patches/multiqc-fix-git-subprocess-error.patch | |
| parent | 92e779592d269ca1924f184496eb4ca832997b12 (diff) | |
| parent | aa21c764d65068783ae31febee2a92eb3d138a24 (diff) | |
Merge branch 'master' into core-updates
Diffstat (limited to 'gnu/packages/patches/multiqc-fix-git-subprocess-error.patch')
| -rw-r--r-- | gnu/packages/patches/multiqc-fix-git-subprocess-error.patch | 16 |
1 files changed, 16 insertions, 0 deletions
diff --git a/gnu/packages/patches/multiqc-fix-git-subprocess-error.patch b/gnu/packages/patches/multiqc-fix-git-subprocess-error.patch new file mode 100644 index 0000000000..87be6142f4 --- /dev/null +++ b/gnu/packages/patches/multiqc-fix-git-subprocess-error.patch @@ -0,0 +1,16 @@ +Without this patch, the incorrect exception is caught when 'git' is not in +PATH. See https://github.com/ewels/MultiQC/pull/377. + +diff --git a/multiqc/utils/config.py b/multiqc/utils/config.py +index 01fa554..4a11793 100755 +--- a/multiqc/utils/config.py ++++ b/multiqc/utils/config.py +@@ -28,7 +28,7 @@ try: + git_hash = subprocess.check_output(['git', 'rev-parse', 'HEAD'], stderr=subprocess.STDOUT) + git_hash_short = git_hash[:7] + version = '{} ({})'.format(version, git_hash_short) +-except subprocess.CalledProcessError: ++except (subprocess.CalledProcessError, FileNotFoundError): + pass + os.chdir(cwd) + |