diff options
| author | Ricardo Wurmus <rekado@elephly.net> | 2020-06-13 00:54:17 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2020-06-13 01:19:54 +0200 |
| commit | 785c7596176d03c0d1eb5bed9276406551975393 (patch) | |
| tree | 7048033a09cbc704e844c41943a3f0c7f8365ac5 /gnu | |
| parent | e6fbaf0cc761aaf2ef2530d5061dfed640d23bc8 (diff) | |
gnu: r-genomicscores: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.0.0.
[propagated-inputs]: Remove r-bsgenome; add r-delayedarray, r-hdf5array, and r-rhdf5.
[native-inputs]: Add r-knitr.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 10 |
1 files changed, 7 insertions, 3 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 17b14a94ae..ced77024b2 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -4321,14 +4321,14 @@ type and symbol colors.") (define-public r-genomicscores (package (name "r-genomicscores") - (version "1.10.0") + (version "2.0.0") (source (origin (method url-fetch) (uri (bioconductor-uri "GenomicScores" version)) (sha256 (base32 - "175iaqv7npa11yw48vmqpgx0qqs3g44c3dsya7ccwd1lg97fznkj")))) + "0si2lgc37mkah4w990q1q2bf8xmshxj7cbx92bcrp0zaipjr96bb")))) (properties `((upstream-name . "GenomicScores"))) (build-system r-build-system) (propagated-inputs @@ -4336,12 +4336,16 @@ type and symbol colors.") ("r-biobase" ,r-biobase) ("r-biocgenerics" ,r-biocgenerics) ("r-biostrings" ,r-biostrings) - ("r-bsgenome" ,r-bsgenome) + ("r-delayedarray" ,r-delayedarray) ("r-genomeinfodb" ,r-genomeinfodb) ("r-genomicranges" ,r-genomicranges) + ("r-hdf5array" ,r-hdf5array) ("r-iranges" ,r-iranges) + ("r-rhdf5" ,r-rhdf5) ("r-s4vectors" ,r-s4vectors) ("r-xml" ,r-xml))) + (native-inputs + `(("r-knitr" ,r-knitr))) (home-page "https://github.com/rcastelo/GenomicScores/") (synopsis "Work with genome-wide position-specific scores") (description |