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authorRicardo Wurmus <rekado@elephly.net>2020-06-13 00:55:32 +0200
committerRicardo Wurmus <rekado@elephly.net>2020-06-13 01:19:55 +0200
commit8a5abc62d514299bcd006efd944871755ca2b7d3 (patch)
tree8c818f474891657a22efad77d5549d491c00cef4 /gnu
parent63c14717e30fefb0bc0c44c9129e74f03673b8d4 (diff)
gnu: r-yapsa: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-yapsa): Update to 1.14.0. [propagated-inputs]: Add r-biostrings, r-bsgenome-hsapiens-ucsc-hg19, r-doparallel, r-dplyr, r-ggbeeswarm, r-magrittr, and r-pracma. [native-inputs]: Add r-knitr.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioconductor.scm15
1 files changed, 12 insertions, 3 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 1db98d449e..5e72cf8ed6 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4757,33 +4757,42 @@ decomposition algorithms.")
(define-public r-yapsa
(package
(name "r-yapsa")
- (version "1.12.0")
+ (version "1.14.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "YAPSA" version))
(sha256
(base32
- "132x51f8k8zyx6j8jk05x4lr9q1hlblgvr69wkhn0q3f8mhaj926"))))
+ "06lkf01vl4fyhj82srx8k870fhw76a1han0kp4jglh43b1c19c1k"))))
(properties `((upstream-name . "YAPSA")))
(build-system r-build-system)
(propagated-inputs
- `(("r-circlize" ,r-circlize)
+ `(("r-biostrings" ,r-biostrings)
+ ("r-bsgenome-hsapiens-ucsc-hg19" ,r-bsgenome-hsapiens-ucsc-hg19)
+ ("r-circlize" ,r-circlize)
("r-complexheatmap" ,r-complexheatmap)
("r-corrplot" ,r-corrplot)
("r-dendextend" ,r-dendextend)
+ ("r-doparallel" ,r-doparallel)
+ ("r-dplyr" ,r-dplyr)
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicranges" ,r-genomicranges)
("r-getoptlong" ,r-getoptlong)
+ ("r-ggbeeswarm" ,r-ggbeeswarm)
("r-ggplot2" ,r-ggplot2)
("r-gridextra" ,r-gridextra)
("r-gtrellis" ,r-gtrellis)
("r-keggrest" ,r-keggrest)
("r-lsei" ,r-lsei)
+ ("r-magrittr" ,r-magrittr)
("r-pmcmr" ,r-pmcmr)
+ ("r-pracma" ,r-pracma)
("r-reshape2" ,r-reshape2)
("r-somaticsignatures" ,r-somaticsignatures)
("r-variantannotation" ,r-variantannotation)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/YAPSA/")
(synopsis "Yet another package for signature analysis")
(description