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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-12-04 09:33:09 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-12-04 09:33:09 +0100 |
| commit | f2580a13856705d30b6d979c9c51df9f5ceda783 (patch) | |
| tree | 5dae6d49d7ad3353c13d9d22916f0ad34cb31fff /gnu | |
| parent | 717d7cda9dbbae3ca6b7101c6e499d0e12718fcf (diff) | |
gnu: r-txdb-hsapiens-ucsc-hg19-knowngene: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-txdb-hsapiens-ucsc-hg19-knowngene)[source]:
Use bioconductor-uri.
[arguments]: Enable substitution.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 11 |
1 files changed, 2 insertions, 9 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 9f79be3874..86d4735d2d 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -497,21 +497,14 @@ genomes and gene ID formats, largely based on the UCSC table browser.") (version "3.2.2") (source (origin (method url-fetch) - ;; We cannot use bioconductor-uri here because this tarball is - ;; located under "data/annotation/" instead of "bioc/". - (uri (string-append "https://bioconductor.org/packages/" - "release/data/annotation/src/contrib" - "/TxDb.Hsapiens.UCSC.hg19.knownGene_" - version ".tar.gz")) + (uri (bioconductor-uri "TxDb.Hsapiens.UCSC.hg19.knownGene" + version 'annotation)) (sha256 (base32 "1sajhcqqwazgz2lqbik7rd935i7kpnh08zxbp2ra10j72yqy4g86")))) (properties `((upstream-name . "TxDb.Hsapiens.UCSC.hg19.knownGene"))) (build-system r-build-system) - ;; As this package provides little more than a very large data file it - ;; doesn't make sense to build substitutes. - (arguments `(#:substitutable? #f)) (propagated-inputs `(("r-genomicfeatures" ,r-genomicfeatures))) (home-page |