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-rw-r--r--gnu/packages/bioconductor.scm33
1 files changed, 33 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 71037a86e2..8463e5874d 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4766,6 +4766,39 @@ provided as a matrix which can be used as an offset for different expression
of gene-level counts.")
(license license:gpl2+)))
+;; This is a CRAN package, but it depends on a Bioconductor package.
+(define-public r-valr
+ (package
+ (name "r-valr")
+ (version "0.6.4")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "valr" version))
+ (sha256
+ (base32
+ "0dd41irvibh6rwi52bw4zg4m7wpyihlp1kdkb8fdji3csw2fiz4k"))))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-broom
+ r-dplyr
+ r-ggplot2
+ r-rcpp
+ r-readr
+ r-rlang
+ r-rtracklayer ;bioconductor package
+ r-stringr
+ r-tibble))
+ (native-inputs
+ (list r-knitr))
+ (home-page "https://github.com/rnabioco/valr")
+ (synopsis "Genome interval arithmetic in R")
+ (description
+ "This package enables you to read and manipulate genome intervals and
+signals. It provides functionality similar to command-line tool suites within
+R, enabling interactive analysis and visualization of genome-scale data.")
+ (license license:expat)))
+
(define-public r-variantannotation
(package
(name "r-variantannotation")