diff options
Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 52 |
1 files changed, 26 insertions, 26 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index aba7f107dc..bdedeabede 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -843,32 +843,6 @@ performing parallel computations on multicore machines.") Disease Ontology.") (license license:artistic2.0))) -(define-public r-pasilla - (package - (name "r-pasilla") - (version "1.14.0") - (source (origin - (method url-fetch) - (uri (string-append - "http://bioconductor.org/packages/release/data/experiment" - "/src/contrib/pasilla_" version ".tar.gz")) - (sha256 - (base32 - "0h124i2fb2lbj2k48zzf1n7ldqa471bs26fbd9vw50299aqx28x0")))) - (build-system r-build-system) - (propagated-inputs - `(("r-biocstyle" ,r-biocstyle) - ("r-dexseq" ,r-dexseq) - ("r-knitr" ,r-knitr) - ("r-rmarkdown" ,r-rmarkdown))) - (home-page "https://www.bioconductor.org/packages/pasilla/") - (synopsis "Data package with per-exon and per-gene read counts") - (description "This package provides per-exon and per-gene read counts -computed for selected genes from RNA-seq data that were presented in the -article 'Conservation of an RNA regulatory map between Drosophila and mammals' -by Brooks et al., Genome Research 2011.") - (license license:lgpl2.1+))) - (define-public r-pfam-db (package (name "r-pfam-db") @@ -1001,6 +975,32 @@ from Illumina 450k methylation arrays.") genomes and gene ID formats, largely based on the UCSC table browser.") (license license:lgpl2.0+))) +(define-public r-pasilla + (package + (name "r-pasilla") + (version "1.14.0") + (source (origin + (method url-fetch) + (uri (string-append + "http://bioconductor.org/packages/release/data/experiment" + "/src/contrib/pasilla_" version ".tar.gz")) + (sha256 + (base32 + "0h124i2fb2lbj2k48zzf1n7ldqa471bs26fbd9vw50299aqx28x0")))) + (build-system r-build-system) + (propagated-inputs + `(("r-biocstyle" ,r-biocstyle) + ("r-dexseq" ,r-dexseq) + ("r-knitr" ,r-knitr) + ("r-rmarkdown" ,r-rmarkdown))) + (home-page "https://www.bioconductor.org/packages/pasilla/") + (synopsis "Data package with per-exon and per-gene read counts") + (description "This package provides per-exon and per-gene read counts +computed for selected genes from RNA-seq data that were presented in the +article 'Conservation of an RNA regulatory map between Drosophila and mammals' +by Brooks et al., Genome Research 2011.") + (license license:lgpl2.1+))) + (define-public r-hsmmsinglecell (package (name "r-hsmmsinglecell") |