diff options
Diffstat (limited to 'gnu/packages/databases.scm')
| -rw-r--r-- | gnu/packages/databases.scm | 101 |
1 files changed, 61 insertions, 40 deletions
diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm index e289a604f9..56531f50e3 100644 --- a/gnu/packages/databases.scm +++ b/gnu/packages/databases.scm @@ -17,7 +17,7 @@ ;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org> ;;; Copyright © 2016 Andy Patterson <ajpatter@uwaterloo.ca> ;;; Copyright © 2016 Danny Milosavljevic <dannym+a@scratchpost.org> -;;; Copyright © 2016, 2017 Marius Bakke <mbakke@fastmail.com> +;;; Copyright © 2016, 2017, 2018 Marius Bakke <mbakke@fastmail.com> ;;; Copyright © 2017 Julien Lepiller <julien@lepiller.eu> ;;; Copyright © 2017 Thomas Danckaert <post@thomasdanckaert.be> ;;; Copyright © 2017 Jelle Licht <jlicht@fsfe.org> @@ -396,14 +396,15 @@ mapping from string keys to string values.") (define-public memcached (package (name "memcached") - (version "1.5.0") + (version "1.5.6") (source (origin (method url-fetch) (uri (string-append "https://memcached.org/files/memcached-" version ".tar.gz")) (sha256 - (base32 "0chwc0g7wfvcad36z8pf2jbgygdnm9nm1l6pwjsn3d2b089gh0f0")))) + (base32 + "00szy9d4szaixi260dcd4846zci04y0sd47ia2lzg0bxkn2ywxcn")))) (build-system gnu-build-system) (inputs `(("libevent" ,libevent) @@ -699,14 +700,14 @@ as a drop-in replacement of MySQL.") (define-public postgresql (package (name "postgresql") - (version "10.2") + (version "10.3") (source (origin (method url-fetch) (uri (string-append "https://ftp.postgresql.org/pub/source/v" version "/postgresql-" version ".tar.bz2")) (sha256 (base32 - "1bav2iyi93h866skrrlqlvsp4sfv1sfww1s305zpzffxcadh0cpy")))) + "06lkcwsf851z49zqcws5yc77s2yrbaazf2nvbk38hpp31rw6i8kf")))) (build-system gnu-build-system) (arguments `(#:configure-flags '("--with-uuid=e2fs") @@ -744,14 +745,14 @@ pictures, sounds, or video.") (package (inherit postgresql) (name "postgresql") - (version "9.6.6") + (version "9.6.8") (source (origin (method url-fetch) (uri (string-append "https://ftp.postgresql.org/pub/source/v" version "/postgresql-" version ".tar.bz2")) (sha256 (base32 - "0m417h30s18rwa7yzkqqcdb22ifpcda2fpg2cyx8bxvjp3ydz71r")))))) + "0w7bwf19wbdd3jjbjv03cnx56qka4801srcbsayk9v792awv7zga")))))) (define-public qdbm (package @@ -840,7 +841,7 @@ types are supported, as is encryption.") (define-public rocksdb (package (name "rocksdb") - (version "5.2.1") + (version "5.10.4") (source (origin (method url-fetch) (uri (string-append "https://github.com/facebook/rocksdb" @@ -848,18 +849,28 @@ types are supported, as is encryption.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "1v2q05bl56sfp51m09z7g6489hkfq4vf6b4qgfg3d96ylgmay9yb")) + "0hp7jxr99vyc57n708hiqk4lks9a9zmjgfjc21mx6v1rmabj2944")) (modules '((guix build utils))) (snippet '(begin ;; TODO: unbundle gtest. (delete-file "build_tools/gnu_parallel") + (substitute* "Makefile" + (("build_tools/gnu_parallel") "parallel")) #t)))) (build-system gnu-build-system) (arguments - `(#:make-flags (list "CC=gcc" + `(#:make-flags (list "CC=gcc" "V=1" + ;; Ceph requires that RTTI is enabled. + "USE_RTTI=1" (string-append "INSTALL_PATH=" - (assoc-ref %outputs "out"))) + (assoc-ref %outputs "out")) + + ;; Running the full test suite takes hours and require + ;; a lot of disk space. Instead we only run a subset + ;; (see .travis.yml and Makefile). + "ROCKSDBTESTS_END=db_tailing_iter_test") + #:test-target "check_some" ;; Many tests fail on 32-bit platforms. There are multiple reports about ;; this upstream, but it's not going to be supported any time soon. #:tests? (let ((system ,(or (%current-target-system) @@ -871,7 +882,6 @@ types are supported, as is encryption.") (add-after 'unpack 'patch-Makefile (lambda _ (substitute* "Makefile" - (("build_tools/gnu_parallel") "parallel") ;; Don't depend on the static library when installing. (("install: install-static") "install: install-shared") @@ -888,20 +898,20 @@ types are supported, as is encryption.") (add-before 'check 'disable-failing-tests (lambda _ (substitute* "Makefile" - ;; This test fails with GCC-5 and is unmaintained. - ;; https://github.com/facebook/rocksdb/issues/2148 - (("^[[:blank:]]+spatial_db_test[[:blank:]]+\\\\") "\\") ;; These tests reliably fail due to "Too many open files". (("^[[:blank:]]+env_test[[:blank:]]+\\\\") "\\") (("^[[:blank:]]+persistent_cache_test[[:blank:]]+\\\\") "\\")) #t)) - (add-after 'check 'build-release-libraries + (add-after 'check 'build ;; The default build target is a debug build for tests. The - ;; install target depends on "shared_lib" and "static_lib" - ;; targets for release builds so we build them here for clarity. - ;; TODO: Add debug output. - (lambda* (#:key (make-flags '()) #:allow-other-keys) - (zero? (apply system* "make" "shared_lib" make-flags))))))) + ;; install target depends on the "shared_lib" release target + ;; so we build it here for clarity. + (lambda* (#:key (make-flags '()) parallel-build? #:allow-other-keys) + (apply invoke "make" "shared_lib" + `(,@(if parallel-build? + `("-j" ,(number->string (parallel-job-count))) + '()) + ,@make-flags))))))) (native-inputs `(("parallel" ,parallel) ("perl" ,perl) @@ -925,8 +935,9 @@ between @dfn{Write-Amplification-Factor} (WAF), @dfn{Read-Amplification-Factor} (RAF) and @dfn{Space-Amplification-Factor} (SAF). It has multi-threaded compactions, making it specially suitable for storing multiple terabytes of data in a single database. RocksDB is partially based on @code{LevelDB}.") - ;; RocksDB is BSD-3 and the JNI adapter is Apache 2.0. - (license (list license:bsd-3 license:asl2.0)))) + ;; RocksDB is dual licensed under GPL2 and ASL 2.0. Some header + ;; files carry the 3-clause BSD license. + (license (list license:gpl2 license:asl2.0 license:bsd-3)))) (define-public sparql-query (package @@ -2037,14 +2048,14 @@ and web services platform functionality.") (define-public r-rmysql (package (name "r-rmysql") - (version "0.10.13") + (version "0.10.14") (source (origin (method url-fetch) (uri (cran-uri "RMySQL" version)) (sha256 (base32 - "1j0vr2l4s02cg2hzgr3pla96pjj4h85sxw28lidy58rg5awnsf82")))) + "01891kn263b02y6addgpy3gn5axg7m10bqbqv7dg9yx9k85am590")))) (properties `((upstream-name . "RMySQL"))) (build-system r-build-system) (native-inputs @@ -2235,17 +2246,21 @@ SQLAlchemy Database Toolkit for Python.") (define-public python-pickleshare (package (name "python-pickleshare") - (version "0.5") + (version "0.7.4") (source (origin (method url-fetch) - (uri (string-append "https://pypi.python.org/packages/source/p/" - "pickleshare/pickleshare-" version ".tar.gz")) + (uri (pypi-uri "pickleshare" version)) (sha256 - (base32 "11ljr90j3p6qswdrbl7p4cjb2i93f6vn0vx9anzpshsx0d2mggn0")))) + (base32 "0yvk14dzxk7g6qpr7iw23vzqbsr0dh4ij4xynkhnzpfz4xr2bac4")))) (build-system python-build-system) - (propagated-inputs - `(("python-pathpy" ,python-pathpy))) + (arguments + `(#:phases (modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "pytest")))))) + (native-inputs + `(("python-pytest" ,python-pytest))) (home-page "https://github.com/vivainio/pickleshare") (synopsis "Tiny key value database with concurrency support") (description @@ -2256,10 +2271,15 @@ value in database is immediately visible to other processes accessing the same database. Concurrency is possible because the values are stored in separate files. Hence the “database” is a directory where all files are governed by PickleShare.") + (properties `((python2-variant . ,(delay python2-pickleshare)))) (license license:expat))) (define-public python2-pickleshare - (package-with-python2 python-pickleshare)) + (let ((pickleshare (package-with-python2 + (strip-python2-variant python-pickleshare)))) + (package (inherit pickleshare) + (propagated-inputs `(("python2-pathlib2" ,python2-pathlib2) + ,@(package-propagated-inputs pickleshare)))))) (define-public python-apsw (package @@ -2270,30 +2290,31 @@ PickleShare.") (method url-fetch) (uri (string-append "https://github.com/rogerbinns/apsw/archive/" version ".tar.gz")) + (file-name (string-append "apsw-" version ".tar.gz")) (sha256 (base32 "00ai7m2pqi26qaflhz314d8k5i3syw7xzr145fhfl0crhyh6adz2")))) (build-system python-build-system) (inputs - `(("sqlite" ,sqlite))) + `(("sqlite" ,sqlite))) (arguments `(#:phases (modify-phases %standard-phases (replace 'build (lambda _ - (zero? - (system* "python" "setup.py" "build" "--enable-all-extensions")))) + (invoke "python" "setup.py" "build" "--enable-all-extensions") + #t)) (add-after 'build 'build-test-helper (lambda _ - (zero? - (system - (string-append "gcc -fPIC -shared -o ./testextension.sqlext " - "-I. -Isqlite3 src/testextension.c") )))) + (invoke "gcc" "-fPIC" "-shared" "-o" "./testextension.sqlext" + "-I." "-Isqlite3" "src/testextension.c") + #t)) (delete 'check) (add-after 'install 'check (lambda* (#:key inputs outputs #:allow-other-keys) (add-installed-pythonpath inputs outputs) - (zero? (system* "python" "setup.py" "test"))))))) + (invoke "python" "setup.py" "test") + #t))))) (home-page "https://github.com/rogerbinns/apsw/") (synopsis "Another Python SQLite Wrapper") (description "APSW is a Python wrapper for the SQLite |