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-rw-r--r--gnu/packages/autotools.scm2
-rw-r--r--gnu/packages/base.scm41
-rw-r--r--gnu/packages/bootstrap.scm4
-rw-r--r--gnu/packages/compression.scm24
-rw-r--r--gnu/packages/cross-base.scm4
-rw-r--r--gnu/packages/file.scm26
-rw-r--r--gnu/packages/games.scm2
-rw-r--r--gnu/packages/gawk.scm12
-rw-r--r--gnu/packages/gcc.scm9
-rw-r--r--gnu/packages/gettext.scm4
-rw-r--r--gnu/packages/glib.scm4
-rw-r--r--gnu/packages/gnome.scm11
-rw-r--r--gnu/packages/gps.scm12
-rw-r--r--gnu/packages/guile.scm6
-rw-r--r--gnu/packages/ld-wrapper.scm95
-rw-r--r--gnu/packages/linux.scm4
-rw-r--r--gnu/packages/m4.scm3
-rw-r--r--gnu/packages/man.scm2
-rw-r--r--gnu/packages/mit-krb5.scm2
-rw-r--r--gnu/packages/ncurses.scm7
-rw-r--r--gnu/packages/patches/file-CVE-2014-3587.patch16
-rw-r--r--gnu/packages/patches/gcc-fix-pr61801.patch25
-rw-r--r--gnu/packages/patches/glibc-CVE-2012-3406.patch282
-rw-r--r--gnu/packages/patches/glibc-CVE-2014-7817.patch171
-rw-r--r--gnu/packages/patches/glibc-mips-dangling-vfork-ref.patch45
-rw-r--r--gnu/packages/patches/m4-readlink-EINVAL.patch18
-rw-r--r--gnu/packages/patchutils.scm2
-rw-r--r--gnu/packages/perl.scm2
-rw-r--r--gnu/packages/pkg-config.scm7
-rw-r--r--gnu/packages/pth.scm9
-rw-r--r--gnu/packages/python.scm4
-rw-r--r--gnu/packages/ruby.scm7
-rw-r--r--gnu/packages/tcl.scm8
-rw-r--r--gnu/packages/version-control.scm2
-rw-r--r--gnu/packages/web.scm11
-rw-r--r--gnu/packages/xfce.scm2
-rw-r--r--gnu/packages/xiph.scm7
-rw-r--r--gnu/packages/xml.scm14
38 files changed, 649 insertions, 257 deletions
diff --git a/gnu/packages/autotools.scm b/gnu/packages/autotools.scm
index 3db3f45949..427c6e3113 100644
--- a/gnu/packages/autotools.scm
+++ b/gnu/packages/autotools.scm
@@ -178,7 +178,7 @@ exec ~a --no-auto-compile \"$0\" \"$@\"
(native-search-paths
(list (search-path-specification
(variable "ACLOCAL_PATH")
- (directories '("share/aclocal")))))
+ (files '("share/aclocal")))))
(arguments
'(#:modules ((guix build gnu-build-system)
(guix build utils)
diff --git a/gnu/packages/base.scm b/gnu/packages/base.scm
index 85e92aad3b..1f479ccbbe 100644
--- a/gnu/packages/base.scm
+++ b/gnu/packages/base.scm
@@ -65,14 +65,14 @@ command-line arguments, multiple languages, and so on.")
(define-public grep
(package
(name "grep")
- (version "2.20")
+ (version "2.21")
(source (origin
(method url-fetch)
(uri (string-append "mirror://gnu/grep/grep-"
version ".tar.xz"))
(sha256
(base32
- "0rcs0spsxdmh6yz8y4frkqp6f5iw19mdbdl9s2v6956hq0mlbbzh"))))
+ "1pp5n15qwxrw1pibwjhhgsibyv5cafhamf8lwzjygs6y00fa2i2j"))))
(build-system gnu-build-system)
(synopsis "Print lines matching a pattern")
(description
@@ -312,14 +312,14 @@ change. GNU make offers many powerful extensions over the standard utility.")
(define-public binutils
(package
(name "binutils")
- (version "2.24")
+ (version "2.25")
(source (origin
(method url-fetch)
(uri (string-append "mirror://gnu/binutils/binutils-"
version ".tar.bz2"))
(sha256
(base32
- "0ds1y7qa0xqihw4ihnsgg6bxanmb228r228ddvwzgrv4jszcbs75"))
+ "08r9i26b05zcwb9zxb6zllpfdiiicdfsgbpsjlrjmvx3rxjzrpi2"))
(patches (list (search-patch "binutils-ld-new-dtags.patch")
(search-patch "binutils-loongson-workaround.patch")))))
(build-system gnu-build-system)
@@ -375,32 +375,37 @@ included.")
(("use_ldconfig=yes")
"use_ldconfig=no")))
(modules '((guix build utils)))
- (patches (list (search-patch "glibc-ldd-x86_64.patch")))))
+ (patches (list (search-patch "glibc-CVE-2014-7817.patch")
+ (search-patch "glibc-CVE-2012-3406.patch")
+ (search-patch "glibc-mips-dangling-vfork-ref.patch")
+ (search-patch "glibc-ldd-x86_64.patch")))))
(build-system gnu-build-system)
;; Glibc's <limits.h> refers to <linux/limit.h>, for instance, so glibc
;; users should automatically pull Linux headers as well.
(propagated-inputs `(("linux-headers" ,linux-libre-headers)))
- ;; Store the locales separately (~100 MiB). Note that "out" retains a
- ;; reference to them anyway, so there's no space savings here.
- ;; TODO: Eventually we may want to add a $LOCALE_ARCHIVE search path like
- ;; Nixpkgs does.
- (outputs '("out" "locales" "debug"))
+ (outputs '("out" "debug"))
(arguments
`(#:out-of-source? #t
#:configure-flags
(list "--enable-add-ons"
"--sysconfdir=/etc"
- (string-append "--localedir=" (assoc-ref %outputs "locales")
- "/share/locale")
+ ;; Installing a locale archive with all the locales is to
+ ;; expensive (~100 MiB), so we rely on users to install the
+ ;; locales they really want.
+ ;;
+ ;; Set the default locale path. In practice, $LOCPATH may be
+ ;; defined to point whatever locales users want. However, setuid
+ ;; binaries don't honor $LOCPATH, so they'll instead look into
+ ;; $libc_cv_localedir; we choose /run/current-system/locale, with
+ ;; the idea that it is going to be populated by the sysadmin.
+ ;;
;; `--localedir' is not honored, so work around it.
;; See <http://sourceware.org/ml/libc-alpha/2013-03/msg00093.html>.
- (string-append "libc_cv_localedir="
- (assoc-ref %outputs "locales")
- "/share/locale")
+ (string-append "libc_cv_localedir=/run/current-system/locale")
(string-append "--with-headers="
(assoc-ref %build-inputs "linux-headers")
@@ -477,11 +482,7 @@ included.")
"")
(("exec @PERL@")
"exec perl"))))
- (alist-cons-after
- 'install 'install-locales
- (lambda _
- (zero? (system* "make" "localedata/install-locales")))
- %standard-phases))))
+ %standard-phases)))
(inputs `(("static-bash" ,(static-package bash-light))))
diff --git a/gnu/packages/bootstrap.scm b/gnu/packages/bootstrap.scm
index 854d97bcfb..5a19783bb6 100644
--- a/gnu/packages/bootstrap.scm
+++ b/gnu/packages/bootstrap.scm
@@ -409,10 +409,10 @@ exec ~a/bin/.gcc-wrapped -B~a/lib \
(native-search-paths
(list (search-path-specification
(variable "CPATH")
- (directories '("include")))
+ (files '("include")))
(search-path-specification
(variable "LIBRARY_PATH")
- (directories '("lib" "lib64")))))
+ (files '("lib" "lib64")))))
(synopsis "Bootstrap binaries of the GNU Compiler Collection")
(description #f)
(home-page #f)
diff --git a/gnu/packages/compression.scm b/gnu/packages/compression.scm
index f2736b9eb3..cda1984f6a 100644
--- a/gnu/packages/compression.scm
+++ b/gnu/packages/compression.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2012, 2013, 2014 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2012, 2013, 2014, 2015 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2013 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2014 Mark H Weaver <mhw@netris.org>
;;;
@@ -115,13 +115,7 @@ file; as a result, it is often used in conjunction with \"tar\", resulting in
(home-page "http://www.gnu.org/software/gzip/")))
(define-public bzip2
- (let ((fix-man-dir
- ;; Move man pages to $out/share/.
- '(lambda* (#:key outputs #:allow-other-keys)
- (with-directory-excursion (assoc-ref outputs "out")
- (mkdir "share")
- (rename-file "man" "share/man"))))
- (build-shared-lib
+ (let ((build-shared-lib
;; Build a shared library.
'(lambda* (#:key inputs #:allow-other-keys)
(patch-makefile-SHELL "Makefile-libbz2_so")
@@ -171,20 +165,16 @@ file; as a result, it is often used in conjunction with \"tar\", resulting in
`(alist-cons-before
'build 'build-shared-lib ,build-shared-lib
(alist-cons-after
- 'install 'fix-man-dir ,fix-man-dir
- (alist-cons-after
- 'install 'install-shared-lib ,install-shared-lib
- (alist-replace 'configure ,set-cross-environment
- %standard-phases))))
+ 'install 'install-shared-lib ,install-shared-lib
+ (alist-replace 'configure ,set-cross-environment
+ %standard-phases)))
;; Native compilation: build the shared library.
`(alist-cons-before
'build 'build-shared-lib ,build-shared-lib
(alist-cons-after
- 'install 'fix-man-dir ,fix-man-dir
- (alist-cons-after
- 'install 'install-shared-lib ,install-shared-lib
- (alist-delete 'configure %standard-phases)))))
+ 'install 'install-shared-lib ,install-shared-lib
+ (alist-delete 'configure %standard-phases))))
#:make-flags (list (string-append "PREFIX="
(assoc-ref %outputs "out")))
diff --git a/gnu/packages/cross-base.scm b/gnu/packages/cross-base.scm
index 74809d08f9..0f32c9fab9 100644
--- a/gnu/packages/cross-base.scm
+++ b/gnu/packages/cross-base.scm
@@ -234,10 +234,10 @@ GCC that does not target a libc; otherwise, target that libc."
(search-paths
(list (search-path-specification
(variable "CROSS_CPATH")
- (directories '("include")))
+ (files '("include")))
(search-path-specification
(variable "CROSS_LIBRARY_PATH")
- (directories '("lib" "lib64")))))
+ (files '("lib" "lib64")))))
(native-search-paths '())))
(define* (cross-libc target
diff --git a/gnu/packages/file.scm b/gnu/packages/file.scm
index 070695ec2c..7d8504b74a 100644
--- a/gnu/packages/file.scm
+++ b/gnu/packages/file.scm
@@ -27,14 +27,14 @@
(define-public file
(package
(name "file")
- (version "5.19")
- (source (origin
- (method url-fetch)
- (uri (string-append "ftp://ftp.astron.com/pub/file/file-"
- version ".tar.gz"))
- (sha256 (base32
- "0z1sgrcfy6d285kj5izy1yypf371bjl3247plh9ppk0svaxv714l"))
- (patches (list (search-patch "file-CVE-2014-3587.patch")))))
+ (version "5.20")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "ftp://ftp.astron.com/pub/file/file-"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "0iyjs9z8kp43gz7gva4j67h4p0n53f7q8x3ibai9s01sp3xnphsv"))))
(build-system gnu-build-system)
;; When cross-compiling, this package depends upon a native install of
@@ -50,13 +50,3 @@ of the file.")
(license bsd-2)
(home-page "http://www.darwinsys.com/file/")))
-(define-public file-5.20 ;fix for CVE-2014-3710
- (package (inherit file)
- (version "5.20")
- (source (origin
- (method url-fetch)
- (uri (string-append "ftp://ftp.astron.com/pub/file/file-"
- version ".tar.gz"))
- (sha256
- (base32
- "0iyjs9z8kp43gz7gva4j67h4p0n53f7q8x3ibai9s01sp3xnphsv"))))))
diff --git a/gnu/packages/games.scm b/gnu/packages/games.scm
index 82cdbc55c4..b1a68a72c7 100644
--- a/gnu/packages/games.scm
+++ b/gnu/packages/games.scm
@@ -714,7 +714,7 @@ for common mesh file formats, and collision detection.")
(native-search-paths
(list (search-path-specification
(variable "MINETEST_SUBGAME_PATH")
- (directories '("share/minetest/games")))))
+ (files '("share/minetest/games")))))
(native-inputs
`(("pkg-config" ,pkg-config)))
(inputs
diff --git a/gnu/packages/gawk.scm b/gnu/packages/gawk.scm
index 10506197f3..996be7af4a 100644
--- a/gnu/packages/gawk.scm
+++ b/gnu/packages/gawk.scm
@@ -64,7 +64,17 @@
'((substitute* "extension/configure"
(("/usr/bin/file") (which "file"))))
'())))
- %standard-phases)))
+
+ (alist-cons-before
+ 'check 'install-locales
+ (lambda _
+ ;; A bunch of tests require the availability of a UTF-8
+ ;; locale and otherwise fail. Give them what they want.
+ (setenv "LOCPATH" (getcwd))
+ (zero? (system* "localedef" "--no-archive"
+ "--prefix" (getcwd) "-i" "en_US"
+ "-f" "UTF-8" "./en_US.UTF-8")))
+ %standard-phases))))
(inputs `(("libsigsegv" ,libsigsegv)
,@(if (%current-target-system)
diff --git a/gnu/packages/gcc.scm b/gnu/packages/gcc.scm
index b28b3e0588..4733fc1af6 100644
--- a/gnu/packages/gcc.scm
+++ b/gnu/packages/gcc.scm
@@ -245,10 +245,10 @@ where the OS part is overloaded to denote a specific ABI---into GCC
(native-search-paths
(list (search-path-specification
(variable "CPATH")
- (directories '("include")))
+ (files '("include")))
(search-path-specification
(variable "LIBRARY_PATH")
- (directories '("lib" "lib64")))))
+ (files '("lib" "lib64")))))
(properties `((gcc-libc . ,(assoc-ref inputs "libc"))))
(synopsis "GNU Compiler Collection")
@@ -261,15 +261,14 @@ Go. It also includes runtime support libraries for these languages.")
(define-public gcc-4.8
(package (inherit gcc-4.7)
- (version "4.8.3")
+ (version "4.8.4")
(source (origin
(method url-fetch)
(uri (string-append "mirror://gnu/gcc/gcc-"
version "/gcc-" version ".tar.bz2"))
(sha256
(base32
- "07hg10zs7gnqz58my10ch0zygizqh0z0bz6pv4pgxx45n48lz3ka"))
- (patches (list (search-patch "gcc-fix-pr61801.patch")))))))
+ "15c6gwm6dzsaagamxkak5smdkf1rdfbqqjs9jdbrp3lbg4ism02a"))))))
(define-public gcc-4.9
(package (inherit gcc-4.7)
diff --git a/gnu/packages/gettext.scm b/gnu/packages/gettext.scm
index bbdf0c5862..dd86fe4c5b 100644
--- a/gnu/packages/gettext.scm
+++ b/gnu/packages/gettext.scm
@@ -35,14 +35,14 @@
(define-public gnu-gettext
(package
(name "gettext")
- (version "0.19.3")
+ (version "0.19.4")
(source (origin
(method url-fetch)
(uri (string-append "mirror://gnu/gettext/gettext-"
version ".tar.gz"))
(sha256
(base32
- "1xmkxviqnq60h4wmh3bi6b1zkc9qsk3l1lv91k0iwfrxb982v5ck"))))
+ "0gvz86m4cs8bdf3mwmwsyx6lrq4ydfxgadrgd9jlx32z3bnz3jca"))))
(build-system gnu-build-system)
(inputs
`(("expat" ,expat)))
diff --git a/gnu/packages/glib.scm b/gnu/packages/glib.scm
index 83d55d64ff..5a5b4dfd0a 100644
--- a/gnu/packages/glib.scm
+++ b/gnu/packages/glib.scm
@@ -189,7 +189,7 @@ shared NFS home directories.")
;; by 'glib-compile-schemas'.
(list (search-path-specification
(variable "XDG_DATA_DIRS")
- (directories '("share")))))
+ (files '("share")))))
(search-paths native-search-paths)
(synopsis "Thread-safe general utility library; basis of GTK+ and GNOME")
@@ -231,7 +231,7 @@ dynamic loading, and an object system.")
(native-search-paths
(list (search-path-specification
(variable "GI_TYPELIB_PATH")
- (directories '("lib/girepository-1.0")))))
+ (files '("lib/girepository-1.0")))))
(search-paths native-search-paths)
(arguments
`(#:phases
diff --git a/gnu/packages/gnome.scm b/gnu/packages/gnome.scm
index a2ef712220..61260557e3 100644
--- a/gnu/packages/gnome.scm
+++ b/gnu/packages/gnome.scm
@@ -143,17 +143,6 @@ The gnome-about program helps find which version of GNOME is installed.")
(base32
"19n4x25ndzngaciiyd8dd6s2mf9gv6nv3wv27ggns2smm7zkj1nb"))))
(build-system gnu-build-system)
- (arguments
- `(#:phases
- (alist-cons-before
- 'check 'pre-check
- (lambda* (#:key inputs #:allow-other-keys #:rest args)
- ;; This is needed, because without it, xmlint etc tries
- ;; to download docbookx.dtd from the net
- (setenv "XML_CATALOG_FILES"
- (string-append (assoc-ref inputs "docbook-xml")
- "/xml/dtd/docbook/catalog.xml")))
- %standard-phases)))
(native-inputs
`(("intltool" ,intltool)
("docbook-xml" ,docbook-xml-4.4)
diff --git a/gnu/packages/gps.scm b/gnu/packages/gps.scm
index 1fbf38f125..231b1d1b04 100644
--- a/gnu/packages/gps.scm
+++ b/gnu/packages/gps.scm
@@ -100,17 +100,7 @@ manipulate maps.")
(substitute* "Makefile"
(("prefix[[:blank:]]*=.*$")
(string-append "prefix = " (assoc-ref outputs "out")
- "\n")))
-
- ;; Make sure the DocBook XML and XSL files are found.
- ;; Note: this is a space-separated list.
- (setenv "XML_CATALOG_FILES"
- (string-append (assoc-ref inputs "docbook-xml")
- "/xml/dtd/docbook/catalog.xml "
- (assoc-ref inputs "docbook-xsl")
- "/xml/xsl/"
- ,(package-full-name docbook-xsl)
- "/catalog.xml")))
+ "\n"))))
%standard-phases)
#:tests? #f))
(inputs
diff --git a/gnu/packages/guile.scm b/gnu/packages/guile.scm
index 6a76bafe84..7e3b5f847d 100644
--- a/gnu/packages/guile.scm
+++ b/gnu/packages/guile.scm
@@ -95,7 +95,7 @@
(native-search-paths
(list (search-path-specification
(variable "GUILE_LOAD_PATH")
- (directories '("share/guile/site")))))
+ (files '("share/guile/site")))))
(synopsis "Scheme implementation intended especially for extensions")
(description
@@ -155,10 +155,10 @@ without requiring the source code to be rewritten.")
(native-search-paths
(list (search-path-specification
(variable "GUILE_LOAD_PATH")
- (directories '("share/guile/site/2.0")))
+ (files '("share/guile/site/2.0")))
(search-path-specification
(variable "GUILE_LOAD_COMPILED_PATH")
- (directories '("share/guile/site/2.0")))))
+ (files '("share/guile/site/2.0")))))
(synopsis "Scheme implementation intended especially for extensions")
(description
diff --git a/gnu/packages/ld-wrapper.scm b/gnu/packages/ld-wrapper.scm
index d3eb083f2f..19856176b3 100644
--- a/gnu/packages/ld-wrapper.scm
+++ b/gnu/packages/ld-wrapper.scm
@@ -11,7 +11,7 @@ main="(@ (gnu build-support ld-wrapper) ld-wrapper)"
exec @GUILE@ -c "(load-compiled \"$0.go\") (apply $main (cdr (command-line)))" "$@"
!#
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2012, 2013, 2014 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2012, 2013, 2014, 2015 Ludovic Courtès <ludo@gnu.org>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -30,6 +30,7 @@ exec @GUILE@ -c "(load-compiled \"$0.go\") (apply $main (cdr (command-line)))" "
(define-module (gnu build-support ld-wrapper)
#:use-module (srfi srfi-1)
+ #:use-module (ice-9 match)
#:export (ld-wrapper))
;;; Commentary:
@@ -103,58 +104,62 @@ exec @GUILE@ -c "(load-compiled \"$0.go\") (apply $main (cdr (command-line)))" "
(< depth %max-symlink-depth)
(loop (readlink file) (+ 1 depth))))))))
-(define (switch-arguments switch args)
- ;; Return the arguments passed for the occurrences of SWITCH--e.g.,
- ;; "-L"--in ARGS.
- (let ((prefix-len (string-length switch)))
- (fold-right (lambda (arg path)
- (if (string-prefix? switch arg)
- (cons (substring arg prefix-len) path)
- path))
- '()
- args)))
-
-(define (library-path args)
- ;; Return the library search path extracted from `-L' switches in ARGS.
- ;; Note: allow references to out-of-store directories. When this leads to
- ;; actual impurities, this is caught later.
- (switch-arguments "-L" args))
-
(define (library-files-linked args)
;; Return the file names of shared libraries explicitly linked against via
- ;; `-l' in ARGS.
- (map (lambda (lib)
- (string-append "lib" lib ".so"))
- (switch-arguments "-l" args)))
-
-(define (rpath-arguments lib-path library-files)
- ;; Return the `-rpath' argument list for each of LIBRARY-FILES found in
- ;; LIB-PATH.
+ ;; `-l' or with an absolute file name in ARGS.
+ (define path+files
+ (fold (lambda (argument result)
+ (match result
+ ((library-path . library-files)
+ (cond ((string-prefix? "-L" argument) ;augment the search path
+ (cons (append library-path
+ (list (string-drop argument 2)))
+ library-files))
+ ((string-prefix? "-l" argument) ;add library
+ (let* ((lib (string-append "lib"
+ (string-drop argument 2)
+ ".so"))
+ (full (search-path library-path lib)))
+ (if full
+ (cons library-path
+ (cons full library-files))
+ result)))
+ ((and (string-prefix? %store-directory argument)
+ (string-suffix? ".so" argument)) ;add library
+ (cons library-path
+ (cons argument library-files)))
+ (else
+ result)))))
+ (cons '() '())
+ args))
+
+ (match path+files
+ ((path . files)
+ (reverse files))))
+
+(define (rpath-arguments library-files)
+ ;; Return the `-rpath' argument list for each of LIBRARY-FILES, a list of
+ ;; absolute file names.
(fold-right (lambda (file args)
- (let ((absolute (search-path lib-path file)))
- (if absolute
- (if (or %allow-impurities?
- (pure-file-name? absolute))
- (cons* "-rpath" (dirname absolute)
- args)
- (begin
- (format (current-error-port)
- "ld-wrapper: error: attempt to use impure library ~s~%"
- absolute)
- (exit 1)))
- args)))
+ (if (or %allow-impurities?
+ (pure-file-name? file))
+ (cons* "-rpath" (dirname file) args)
+ (begin
+ (format (current-error-port)
+ "ld-wrapper: error: attempt to use impure library ~s~%"
+ file)
+ (exit 1))))
'()
library-files))
(define (ld-wrapper . args)
;; Invoke the real `ld' with ARGS, augmented with `-rpath' switches.
- (let* ((lib-path (library-path args))
- (libs (library-files-linked args))
- (args (append args (rpath-arguments lib-path libs))))
- (if %debug?
- (format (current-error-port)
- "ld-wrapper: invoking `~a' with ~s~%"
- %real-ld args))
+ (let* ((libs (library-files-linked args))
+ (args (append args (rpath-arguments libs))))
+ (when %debug?
+ (format (current-error-port)
+ "ld-wrapper: invoking `~a' with ~s~%"
+ %real-ld args))
(apply execl %real-ld (basename %real-ld) args)))
;;; ld-wrapper.scm ends here
diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm
index a2708a290f..9dc5f5cd40 100644
--- a/gnu/packages/linux.scm
+++ b/gnu/packages/linux.scm
@@ -196,7 +196,7 @@ for SYSTEM, or #f if there is no configuration for SYSTEM."
(build-phase
'(lambda* (#:key system inputs #:allow-other-keys #:rest args)
;; Apply the neat patch.
- (system* "patch" "-p1" "--batch"
+ (system* "patch" "-p1" "--force"
"-i" (assoc-ref inputs "patch/freedo+gnu"))
(let ((arch (car (string-split system #\-))))
@@ -774,7 +774,7 @@ manpages.")
'unpack 'patch
(lambda* (#:key inputs #:allow-other-keys)
(define (apply-patch file)
- (zero? (system* "patch" "-p1" "--batch"
+ (zero? (system* "patch" "-p1" "--force"
"--input" file)))
(let ((patch.gz (assoc-ref inputs "patch")))
diff --git a/gnu/packages/m4.scm b/gnu/packages/m4.scm
index 0915fde4f2..b3b3a00fde 100644
--- a/gnu/packages/m4.scm
+++ b/gnu/packages/m4.scm
@@ -33,8 +33,7 @@
version ".tar.bz2"))
(sha256
(base32
- "0w0da1chh12mczxa5lnwzjk9czi3dq6gnnndbpa6w4rj76b1yklf"))
- (patches (list (search-patch "m4-readlink-EINVAL.patch")))))
+ "0w0da1chh12mczxa5lnwzjk9czi3dq6gnnndbpa6w4rj76b1yklf"))))
(build-system gnu-build-system)
(arguments
;; XXX: Disable tests on those platforms with know issues.
diff --git a/gnu/packages/man.scm b/gnu/packages/man.scm
index 028403ce74..712622aee8 100644
--- a/gnu/packages/man.scm
+++ b/gnu/packages/man.scm
@@ -105,7 +105,7 @@ a flexible and convenient way.")
(native-search-paths
(list (search-path-specification
(variable "MANPATH")
- (directories '("share/man")))))
+ (files '("share/man")))))
(home-page "http://man-db.nongnu.org/")
(synopsis "Standard Unix documentation system")
(description
diff --git a/gnu/packages/mit-krb5.scm b/gnu/packages/mit-krb5.scm
index 2528f46157..3f3e85773e 100644
--- a/gnu/packages/mit-krb5.scm
+++ b/gnu/packages/mit-krb5.scm
@@ -62,7 +62,7 @@
;; XXX The current patch system does not support unusual
;; source unpack methods, so we have to apply this patch in a
;; non-standard way.
- (zero? (system* "patch" "-p1" "--batch" "-i"
+ (zero? (system* "patch" "-p1" "--force" "-i"
(assoc-ref %build-inputs "patch/init-fix"))))))
(alist-replace
'check
diff --git a/gnu/packages/ncurses.scm b/gnu/packages/ncurses.scm
index de7e6f6721..0dbc583f79 100644
--- a/gnu/packages/ncurses.scm
+++ b/gnu/packages/ncurses.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2012, 2013, 2014 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2012, 2013, 2014, 2015 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2014 Mark H Weaver <mhw@netris.org>
;;;
;;; This file is part of GNU Guix.
@@ -99,11 +99,6 @@
,(string-append "--includedir=" (assoc-ref %outputs "out")
"/include")
- ;; By default man pages land in PREFIX/man, but we want them
- ;; in PREFIX/share/man.
- ,(string-append "--mandir=" (assoc-ref %outputs "out")
- "/share/man")
-
;; Make sure programs like 'tic', 'reset', and 'clear' have a
;; correct RUNPATH.
,(string-append "LDFLAGS=-Wl,-rpath=" (assoc-ref %outputs "out")
diff --git a/gnu/packages/patches/file-CVE-2014-3587.patch b/gnu/packages/patches/file-CVE-2014-3587.patch
deleted file mode 100644
index cf88bf5f3e..0000000000
--- a/gnu/packages/patches/file-CVE-2014-3587.patch
+++ /dev/null
@@ -1,16 +0,0 @@
-Fixes CVE-2014-3587. Copied from upstream commit
-0641e56be1af003aa02c7c6b0184466540637233.
-
---- file-5.19/src/cdf.c.orig 2014-06-09 09:04:37.000000000 -0400
-+++ file-5.19/src/cdf.c 2014-08-26 11:55:23.887118898 -0400
-@@ -824,6 +824,10 @@
- q = (const uint8_t *)(const void *)
- ((const char *)(const void *)p + ofs
- - 2 * sizeof(uint32_t));
-+ if (q < p) {
-+ DPRINTF(("Wrapped around %p < %p\n", q, p));
-+ goto out;
-+ }
- if (q > e) {
- DPRINTF(("Ran of the end %p > %p\n", q, e));
- goto out;
diff --git a/gnu/packages/patches/gcc-fix-pr61801.patch b/gnu/packages/patches/gcc-fix-pr61801.patch
deleted file mode 100644
index e9cd92aa1c..0000000000
--- a/gnu/packages/patches/gcc-fix-pr61801.patch
+++ /dev/null
@@ -1,25 +0,0 @@
-GCC bug fix for <https://gcc.gnu.org/bugzilla/show_bug.cgi?id=61801>.
-Initially discussed at
- <http://lists.gnu.org/archive/html/guix-devel/2014-09/msg00283.html>.
-Patch from <https://gcc.gnu.org/viewcvs/gcc?view=revision&revision=212740>.
-
-2014-07-17 Richard Biener <rguenther@suse.de>
-
- PR rtl-optimization/61801
-
- * sched-deps.c (sched_analyze_2): For ASM_OPERANDS and
- ASM_INPUT don't set reg_pending_barrier if it appears in a
- debug-insn.
-
---- gcc-4_8-branch/gcc/sched-deps.c 2014/07/17 07:48:49 212739
-+++ gcc-4_8-branch/gcc/sched-deps.c 2014/07/17 07:49:44 212740
-@@ -2744,7 +2744,8 @@
- Consider for instance a volatile asm that changes the fpu rounding
- mode. An insn should not be moved across this even if it only uses
- pseudo-regs because it might give an incorrectly rounded result. */
-- if (code != ASM_OPERANDS || MEM_VOLATILE_P (x))
-+ if ((code != ASM_OPERANDS || MEM_VOLATILE_P (x))
-+ && !DEBUG_INSN_P (insn))
- reg_pending_barrier = TRUE_BARRIER;
-
- /* For all ASM_OPERANDS, we must traverse the vector of input operands.
diff --git a/gnu/packages/patches/glibc-CVE-2012-3406.patch b/gnu/packages/patches/glibc-CVE-2012-3406.patch
new file mode 100644
index 0000000000..9147a2aeee
--- /dev/null
+++ b/gnu/packages/patches/glibc-CVE-2012-3406.patch
@@ -0,0 +1,282 @@
+Fix CVE-2012-3406: Stack overflow in vfprintf [BZ #16617]
+
+Note: Here the ChangeLog and NEWS updates are removed from Jeff's
+ patch, since they depend on other earlier commits.
+
+From: Jeff Law <law@redhat.com>
+Date: Mon, 15 Dec 2014 09:09:32 +0000 (+0100)
+Subject: CVE-2012-3406: Stack overflow in vfprintf [BZ #16617]
+X-Git-Url: https://sourceware.org/git/gitweb.cgi?p=glibc.git;a=commitdiff_plain;h=a3a1f4163c4d0f9a36056c8640661a88674ae8a2
+
+CVE-2012-3406: Stack overflow in vfprintf [BZ #16617]
+
+A larger number of format specifiers coudld cause a stack overflow,
+potentially allowing to bypass _FORTIFY_SOURCE format string
+protection.
+
+(cherry picked from commit a5357b7ce2a2982c5778435704bcdb55ce3667a0)
+(cherry picked from commit ae61fc7b33d9d99d2763c16de8275227dc9748ba)
+
+Conflicts:
+ NEWS
+---
+
+diff --git a/stdio-common/Makefile b/stdio-common/Makefile
+index 5f8e534..e5e45b6 100644
+--- a/stdio-common/Makefile
++++ b/stdio-common/Makefile
+@@ -57,7 +57,7 @@ tests := tstscanf test_rdwr test-popen tstgetln test-fseek \
+ bug19 bug19a tst-popen2 scanf13 scanf14 scanf15 bug20 bug21 bug22 \
+ scanf16 scanf17 tst-setvbuf1 tst-grouping bug23 bug24 \
+ bug-vfprintf-nargs tst-long-dbl-fphex tst-fphex-wide tst-sprintf3 \
+- bug25 tst-printf-round bug26
++ bug25 tst-printf-round bug23-2 bug23-3 bug23-4 bug26
+
+ test-srcs = tst-unbputc tst-printf
+
+diff --git a/stdio-common/bug23-2.c b/stdio-common/bug23-2.c
+new file mode 100644
+index 0000000..9e0cfe6
+--- /dev/null
++++ b/stdio-common/bug23-2.c
+@@ -0,0 +1,70 @@
++#include <stdio.h>
++#include <string.h>
++#include <stdlib.h>
++
++static const char expected[] = "\
++\n\
++a\n\
++abbcd55\
++\n\
++a\n\
++abbcd55\
++\n\
++a\n\
++abbcd55\
++\n\
++a\n\
++abbcd55\
++\n\
++a\n\
++abbcd55\
++\n\
++a\n\
++abbcd55\
++\n\
++a\n\
++abbcd55\
++\n\
++a\n\
++abbcd55\
++\n\
++a\n\
++abbcd55\
++\n\
++a\n\
++abbcd55\
++\n\
++a\n\
++abbcd55\
++\n\
++a\n\
++abbcd55\
++\n\
++a\n\
++abbcd55%%%%%%%%%%%%%%%%%%%%%%%%%%\n";
++
++static int
++do_test (void)
++{
++ char *buf = malloc (strlen (expected) + 1);
++ snprintf (buf, strlen (expected) + 1,
++ "\n%1$s\n" "%1$s" "%2$s" "%2$s" "%3$s" "%4$s" "%5$d" "%5$d"
++ "\n%1$s\n" "%1$s" "%2$s" "%2$s" "%3$s" "%4$s" "%5$d" "%5$d"
++ "\n%1$s\n" "%1$s" "%2$s" "%2$s" "%3$s" "%4$s" "%5$d" "%5$d"
++ "\n%1$s\n" "%1$s" "%2$s" "%2$s" "%3$s" "%4$s" "%5$d" "%5$d"
++ "\n%1$s\n" "%1$s" "%2$s" "%2$s" "%3$s" "%4$s" "%5$d" "%5$d"
++ "\n%1$s\n" "%1$s" "%2$s" "%2$s" "%3$s" "%4$s" "%5$d" "%5$d"
++ "\n%1$s\n" "%1$s" "%2$s" "%2$s" "%3$s" "%4$s" "%5$d" "%5$d"
++ "\n%1$s\n" "%1$s" "%2$s" "%2$s" "%3$s" "%4$s" "%5$d" "%5$d"
++ "\n%1$s\n" "%1$s" "%2$s" "%2$s" "%3$s" "%4$s" "%5$d" "%5$d"
++ "\n%1$s\n" "%1$s" "%2$s" "%2$s" "%3$s" "%4$s" "%5$d" "%5$d"
++ "\n%1$s\n" "%1$s" "%2$s" "%2$s" "%3$s" "%4$s" "%5$d" "%5$d"
++ "\n%1$s\n" "%1$s" "%2$s" "%2$s" "%3$s" "%4$s" "%5$d" "%5$d"
++ "\n%1$s\n" "%1$s" "%2$s" "%2$s" "%3$s" "%4$s" "%5$d" "%5$d"
++ "%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%\n",
++ "a", "b", "c", "d", 5);
++ return strcmp (buf, expected) != 0;
++}
++
++#define TEST_FUNCTION do_test ()
++#include "../test-skeleton.c"
+diff --git a/stdio-common/bug23-3.c b/stdio-common/bug23-3.c
+new file mode 100644
+index 0000000..57c8cef
+--- /dev/null
++++ b/stdio-common/bug23-3.c
+@@ -0,0 +1,50 @@
++#include <stdio.h>
++#include <string.h>
++#include <stdlib.h>
++
++int
++do_test (void)
++{
++ size_t instances = 16384;
++#define X0 "\n%1$s\n" "%1$s" "%2$s" "%2$s" "%3$s" "%4$s" "%5$d" "%5$d"
++ const char *item = "\na\nabbcd55";
++#define X3 X0 X0 X0 X0 X0 X0 X0 X0
++#define X6 X3 X3 X3 X3 X3 X3 X3 X3
++#define X9 X6 X6 X6 X6 X6 X6 X6 X6
++#define X12 X9 X9 X9 X9 X9 X9 X9 X9
++#define X14 X12 X12 X12 X12
++#define TRAILER "%%%%%%%%%%%%%%%%%%%%%%%%%%"
++#define TRAILER2 TRAILER TRAILER
++ size_t length = instances * strlen (item) + strlen (TRAILER) + 1;
++
++ char *buf = malloc (length + 1);
++ snprintf (buf, length + 1,
++ X14 TRAILER2 "\n",
++ "a", "b", "c", "d", 5);
++
++ const char *p = buf;
++ size_t i;
++ for (i = 0; i < instances; ++i)
++ {
++ const char *expected;
++ for (expected = item; *expected; ++expected)
++ {
++ if (*p != *expected)
++ {
++ printf ("mismatch at offset %zu (%zu): expected %d, got %d\n",
++ (size_t) (p - buf), i, *expected & 0xFF, *p & 0xFF);
++ return 1;
++ }
++ ++p;
++ }
++ }
++ if (strcmp (p, TRAILER "\n") != 0)
++ {
++ printf ("mismatch at trailer: [%s]\n", p);
++ return 1;
++ }
++ free (buf);
++ return 0;
++}
++#define TEST_FUNCTION do_test ()
++#include "../test-skeleton.c"
+diff --git a/stdio-common/bug23-4.c b/stdio-common/bug23-4.c
+new file mode 100644
+index 0000000..a478564
+--- /dev/null
++++ b/stdio-common/bug23-4.c
+@@ -0,0 +1,31 @@
++#include <stdio.h>
++#include <stdlib.h>
++#include <string.h>
++#include <sys/resource.h>
++
++#define LIMIT 1000000
++
++int
++main (void)
++{
++ struct rlimit lim;
++ getrlimit (RLIMIT_STACK, &lim);
++ lim.rlim_cur = 1048576;
++ setrlimit (RLIMIT_STACK, &lim);
++ char *fmtstr = malloc (4 * LIMIT + 1);
++ if (fmtstr == NULL)
++ abort ();
++ char *output = malloc (LIMIT + 1);
++ if (output == NULL)
++ abort ();
++ for (size_t i = 0; i < LIMIT; i++)
++ memcpy (fmtstr + 4 * i, "%1$d", 4);
++ fmtstr[4 * LIMIT] = '\0';
++ int ret = snprintf (output, LIMIT + 1, fmtstr, 0);
++ if (ret != LIMIT)
++ abort ();
++ for (size_t i = 0; i < LIMIT; i++)
++ if (output[i] != '0')
++ abort ();
++ return 0;
++}
+diff --git a/stdio-common/vfprintf.c b/stdio-common/vfprintf.c
+index c4ff833..429a3d1 100644
+--- a/stdio-common/vfprintf.c
++++ b/stdio-common/vfprintf.c
+@@ -263,6 +263,12 @@ vfprintf (FILE *s, const CHAR_T *format, va_list ap)
+ /* For the argument descriptions, which may be allocated on the heap. */
+ void *args_malloced = NULL;
+
++ /* For positional argument handling. */
++ struct printf_spec *specs;
++
++ /* Track if we malloced the SPECS array and thus must free it. */
++ bool specs_malloced = false;
++
+ /* This table maps a character into a number representing a
+ class. In each step there is a destination label for each
+ class. */
+@@ -1679,8 +1685,8 @@ do_positional:
+ size_t nspecs = 0;
+ /* A more or less arbitrary start value. */
+ size_t nspecs_size = 32 * sizeof (struct printf_spec);
+- struct printf_spec *specs = alloca (nspecs_size);
+
++ specs = alloca (nspecs_size);
+ /* The number of arguments the format string requests. This will
+ determine the size of the array needed to store the argument
+ attributes. */
+@@ -1721,11 +1727,39 @@ do_positional:
+ if (nspecs * sizeof (*specs) >= nspecs_size)
+ {
+ /* Extend the array of format specifiers. */
++ if (nspecs_size * 2 < nspecs_size)
++ {
++ __set_errno (ENOMEM);
++ done = -1;
++ goto all_done;
++ }
+ struct printf_spec *old = specs;
+- specs = extend_alloca (specs, nspecs_size, 2 * nspecs_size);
++ if (__libc_use_alloca (2 * nspecs_size))
++ specs = extend_alloca (specs, nspecs_size, 2 * nspecs_size);
++ else
++ {
++ nspecs_size *= 2;
++ specs = malloc (nspecs_size);
++ if (specs == NULL)
++ {
++ __set_errno (ENOMEM);
++ specs = old;
++ done = -1;
++ goto all_done;
++ }
++ }
+
+ /* Copy the old array's elements to the new space. */
+ memmove (specs, old, nspecs * sizeof (*specs));
++
++ /* If we had previously malloc'd space for SPECS, then
++ release it after the copy is complete. */
++ if (specs_malloced)
++ free (old);
++
++ /* Now set SPECS_MALLOCED if needed. */
++ if (!__libc_use_alloca (nspecs_size))
++ specs_malloced = true;
+ }
+
+ /* Parse the format specifier. */
+@@ -2046,6 +2080,8 @@ do_positional:
+ }
+
+ all_done:
++ if (specs_malloced)
++ free (specs);
+ if (__glibc_unlikely (args_malloced != NULL))
+ free (args_malloced);
+ if (__glibc_unlikely (workstart != NULL))
diff --git a/gnu/packages/patches/glibc-CVE-2014-7817.patch b/gnu/packages/patches/glibc-CVE-2014-7817.patch
new file mode 100644
index 0000000000..14c885523c
--- /dev/null
+++ b/gnu/packages/patches/glibc-CVE-2014-7817.patch
@@ -0,0 +1,171 @@
+Fix CVE-2014-7817: wordexp fails to honour WRDE_NOCMD.
+
+Note: Here the ChangeLog and NEWS updates are removed from Carlos's
+ patch, since they depend on other earlier commits.
+
+From: Carlos O'Donell <carlos@redhat.com>
+Date: Wed, 19 Nov 2014 16:44:12 +0000 (-0500)
+Subject: CVE-2014-7817: wordexp fails to honour WRDE_NOCMD.
+X-Git-Url: https://sourceware.org/git/gitweb.cgi?p=glibc.git;a=commitdiff_plain;h=33ceaf6187b31ea15284ac65131749e1cb68d2ae
+
+CVE-2014-7817: wordexp fails to honour WRDE_NOCMD.
+
+The function wordexp() fails to properly handle the WRDE_NOCMD
+flag when processing arithmetic inputs in the form of "$((... ``))"
+where "..." can be anything valid. The backticks in the arithmetic
+epxression are evaluated by in a shell even if WRDE_NOCMD forbade
+command substitution. This allows an attacker to attempt to pass
+dangerous commands via constructs of the above form, and bypass
+the WRDE_NOCMD flag. This patch fixes this by checking for WRDE_NOCMD
+in exec_comm(), the only place that can execute a shell. All other
+checks for WRDE_NOCMD are superfluous and removed.
+
+We expand the testsuite and add 3 new regression tests of roughly
+the same form but with a couple of nested levels.
+
+On top of the 3 new tests we add fork validation to the WRDE_NOCMD
+testing. If any forks are detected during the execution of a wordexp()
+call with WRDE_NOCMD, the test is marked as failed. This is slightly
+heuristic since vfork might be used in the future, but it provides a
+higher level of assurance that no shells were executed as part of
+command substitution with WRDE_NOCMD in effect. In addition it doesn't
+require libpthread or libdl, instead we use the public implementation
+namespace function __register_atfork (already part of the public ABI
+for libpthread).
+
+Tested on x86_64 with no regressions.
+
+(cherry picked from commit a39208bd7fb76c1b01c127b4c61f9bfd915bfe7c)
+---
+
+diff --git a/posix/wordexp-test.c b/posix/wordexp-test.c
+index 4957006..bdd65e4 100644
+--- a/posix/wordexp-test.c
++++ b/posix/wordexp-test.c
+@@ -27,6 +27,25 @@
+
+ #define IFS " \n\t"
+
++extern void *__dso_handle __attribute__ ((__weak__, __visibility__ ("hidden")));
++extern int __register_atfork (void (*) (void), void (*) (void), void (*) (void), void *);
++
++static int __app_register_atfork (void (*prepare) (void), void (*parent) (void), void (*child) (void))
++{
++ return __register_atfork (prepare, parent, child,
++ &__dso_handle == NULL ? NULL : __dso_handle);
++}
++
++/* Number of forks seen. */
++static int registered_forks;
++
++/* For each fork increment the fork count. */
++static void
++register_fork (void)
++{
++ registered_forks++;
++}
++
+ struct test_case_struct
+ {
+ int retval;
+@@ -206,6 +225,12 @@ struct test_case_struct
+ { WRDE_SYNTAX, NULL, "$((2+))", 0, 0, { NULL, }, IFS },
+ { WRDE_SYNTAX, NULL, "`", 0, 0, { NULL, }, IFS },
+ { WRDE_SYNTAX, NULL, "$((010+4+))", 0, 0, { NULL }, IFS },
++ /* Test for CVE-2014-7817. We test 3 combinations of command
++ substitution inside an arithmetic expression to make sure that
++ no commands are executed and error is returned. */
++ { WRDE_CMDSUB, NULL, "$((`echo 1`))", WRDE_NOCMD, 0, { NULL, }, IFS },
++ { WRDE_CMDSUB, NULL, "$((1+`echo 1`))", WRDE_NOCMD, 0, { NULL, }, IFS },
++ { WRDE_CMDSUB, NULL, "$((1+$((`echo 1`))))", WRDE_NOCMD, 0, { NULL, }, IFS },
+
+ { -1, NULL, NULL, 0, 0, { NULL, }, IFS },
+ };
+@@ -258,6 +283,15 @@ main (int argc, char *argv[])
+ return -1;
+ }
+
++ /* If we are not allowed to do command substitution, we install
++ fork handlers to verify that no forks happened. No forks should
++ happen at all if command substitution is disabled. */
++ if (__app_register_atfork (register_fork, NULL, NULL) != 0)
++ {
++ printf ("Failed to register fork handler.\n");
++ return -1;
++ }
++
+ for (test = 0; test_case[test].retval != -1; test++)
+ if (testit (&test_case[test]))
+ ++fail;
+@@ -367,6 +401,9 @@ testit (struct test_case_struct *tc)
+
+ printf ("Test %d (%s): ", ++tests, tc->words);
+
++ if (tc->flags & WRDE_NOCMD)
++ registered_forks = 0;
++
+ if (tc->flags & WRDE_APPEND)
+ {
+ /* initial wordexp() call, to be appended to */
+@@ -378,6 +415,13 @@ testit (struct test_case_struct *tc)
+ }
+ retval = wordexp (tc->words, &we, tc->flags);
+
++ if ((tc->flags & WRDE_NOCMD)
++ && (registered_forks > 0))
++ {
++ printf ("FAILED fork called for WRDE_NOCMD\n");
++ return 1;
++ }
++
+ if (tc->flags & WRDE_DOOFFS)
+ start_offs = sav_we.we_offs;
+
+diff --git a/posix/wordexp.c b/posix/wordexp.c
+index b6b65dd..26f3a26 100644
+--- a/posix/wordexp.c
++++ b/posix/wordexp.c
+@@ -893,6 +893,10 @@ exec_comm (char *comm, char **word, size_t *word_length, size_t *max_length,
+ pid_t pid;
+ int noexec = 0;
+
++ /* Do nothing if command substitution should not succeed. */
++ if (flags & WRDE_NOCMD)
++ return WRDE_CMDSUB;
++
+ /* Don't fork() unless necessary */
+ if (!comm || !*comm)
+ return 0;
+@@ -2082,9 +2086,6 @@ parse_dollars (char **word, size_t *word_length, size_t *max_length,
+ }
+ }
+
+- if (flags & WRDE_NOCMD)
+- return WRDE_CMDSUB;
+-
+ (*offset) += 2;
+ return parse_comm (word, word_length, max_length, words, offset, flags,
+ quoted? NULL : pwordexp, ifs, ifs_white);
+@@ -2196,9 +2197,6 @@ parse_dquote (char **word, size_t *word_length, size_t *max_length,
+ break;
+
+ case '`':
+- if (flags & WRDE_NOCMD)
+- return WRDE_CMDSUB;
+-
+ ++(*offset);
+ error = parse_backtick (word, word_length, max_length, words,
+ offset, flags, NULL, NULL, NULL);
+@@ -2357,12 +2355,6 @@ wordexp (const char *words, wordexp_t *pwordexp, int flags)
+ break;
+
+ case '`':
+- if (flags & WRDE_NOCMD)
+- {
+- error = WRDE_CMDSUB;
+- goto do_error;
+- }
+-
+ ++words_offset;
+ error = parse_backtick (&word, &word_length, &max_length, words,
+ &words_offset, flags, pwordexp, ifs,
diff --git a/gnu/packages/patches/glibc-mips-dangling-vfork-ref.patch b/gnu/packages/patches/glibc-mips-dangling-vfork-ref.patch
new file mode 100644
index 0000000000..852b6de669
--- /dev/null
+++ b/gnu/packages/patches/glibc-mips-dangling-vfork-ref.patch
@@ -0,0 +1,45 @@
+Avoid a dangling `vfork@GLIBC_2.0' reference on MIPS.
+
+Note: Here the ChangeLog and NEWS updates are removed from Maciej's
+ patch, since they depend on other earlier commits.
+
+From: Maciej W. Rozycki <macro@codesourcery.com>
+Date: Wed, 22 Oct 2014 14:20:37 +0000 (+0100)
+Subject: MIPS: Avoid a dangling `vfork@GLIBC_2.0' reference
+X-Git-Url: https://sourceware.org/git/?p=glibc.git;a=commitdiff_plain;h=c14e752fc73d34c75d4f84f37fea8e0b1734cf98
+
+MIPS: Avoid a dangling `vfork@GLIBC_2.0' reference
+
+This satisfies a symbol reference created with:
+
+ .symver __libc_vfork, vfork@GLIBC_2.0
+
+where `__libc_vfork' has not been defined or referenced. In this case
+the `vfork@GLIBC_2.0' reference is supposed to be discarded, however a
+bug present in GAS since forever causes an undefined symbol table entry
+to be created. This in turn triggers a problem in the linker that can
+manifest itself by link errors such as:
+
+ld: libpthread.so: invalid string offset 2765592330 >= 5154 for section `.dynstr'
+
+The GAS and linker bugs need to be resolved, but we can avoid them too
+by providing a `__libc_vfork' definition just like our other platforms.
+
+ [BZ #17485]
+ * sysdeps/unix/sysv/linux/mips/vfork.S (__libc_vfork): Define.
+
+(cherry picked from commit b5af9297d51a43f96c5be1bafab032184690dd6f)
+
+Conflicts:
+ NEWS
+---
+
+diff --git a/sysdeps/unix/sysv/linux/mips/vfork.S b/sysdeps/unix/sysv/linux/mips/vfork.S
+index 80c362d..2c1a747 100644
+--- a/sysdeps/unix/sysv/linux/mips/vfork.S
++++ b/sysdeps/unix/sysv/linux/mips/vfork.S
+@@ -108,3 +108,4 @@ L(error):
+
+ libc_hidden_def(__vfork)
+ weak_alias (__vfork, vfork)
++strong_alias (__vfork, __libc_vfork)
diff --git a/gnu/packages/patches/m4-readlink-EINVAL.patch b/gnu/packages/patches/m4-readlink-EINVAL.patch
deleted file mode 100644
index dd371584a7..0000000000
--- a/gnu/packages/patches/m4-readlink-EINVAL.patch
+++ /dev/null
@@ -1,18 +0,0 @@
-Newer Linux kernels would return EINVAL instead of ENOENT.
-The patch below, taken from Gnulib, allows the test to pass when
-these Linux versions are in use:
-https://lists.gnu.org/archive/html/bug-gnulib/2011-03/msg00308.html .
-
-diff --git a/tests/test-readlink.h b/tests/test-readlink.h
-index 08d5662..7247fc4 100644
---- a/tests/test-readlink.h
-+++ b/tests/test-readlink.h
-@@ -38,7 +38,7 @@ test_readlink (ssize_t (*func) (char const *, char *, size_t), bool print)
- ASSERT (errno == ENOENT);
- errno = 0;
- ASSERT (func ("", buf, sizeof buf) == -1);
-- ASSERT (errno == ENOENT);
-+ ASSERT (errno == ENOENT || errno == EINVAL);
- errno = 0;
- ASSERT (func (".", buf, sizeof buf) == -1);
- ASSERT (errno == EINVAL);
diff --git a/gnu/packages/patchutils.scm b/gnu/packages/patchutils.scm
index 3dbf72435e..48f4d29584 100644
--- a/gnu/packages/patchutils.scm
+++ b/gnu/packages/patchutils.scm
@@ -96,7 +96,7 @@ listing the files modified by a patch.")
(build-system gnu-build-system)
(inputs `(("perl" ,perl)
("less" ,less)
- ("file" ,file-5.20) ;work around CVE-2014-3710
+ ("file" ,file)
("ed" ,ed)))
(arguments
'(#:parallel-tests? #f
diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm
index 03cad3e25f..699fe751de 100644
--- a/gnu/packages/perl.scm
+++ b/gnu/packages/perl.scm
@@ -66,7 +66,7 @@
%standard-phases)))
(native-search-paths (list (search-path-specification
(variable "PERL5LIB")
- (directories '("lib/perl5/site_perl")))))
+ (files '("lib/perl5/site_perl")))))
(synopsis "Implementation of the Perl programming language")
(description
"Perl 5 is a highly capable, feature-rich programming language with over
diff --git a/gnu/packages/pkg-config.scm b/gnu/packages/pkg-config.scm
index 62b0d5f65c..dd5120c474 100644
--- a/gnu/packages/pkg-config.scm
+++ b/gnu/packages/pkg-config.scm
@@ -30,7 +30,7 @@
(define-public %pkg-config
(package
(name "pkg-config")
- (version "0.27.1")
+ (version "0.28")
(source (origin
(method url-fetch)
(uri (string-append
@@ -38,14 +38,13 @@
version ".tar.gz"))
(sha256
(base32
- "05wc5nwkqz7saj2v33ydmz1y6jdg659dll4jjh91n41m63gx0qsg"))))
+ "0igqq5m204w71m11y0nipbdf5apx87hwfll6axs12hn4dqfb6vkb"))))
(build-system gnu-build-system)
(arguments `(#:configure-flags '("--with-internal-glib")))
(native-search-paths
(list (search-path-specification
(variable "PKG_CONFIG_PATH")
- (directories '("lib/pkgconfig" "lib64/pkgconfig"
- "share/pkgconfig")))))
+ (files '("lib/pkgconfig" "lib64/pkgconfig" "share/pkgconfig")))))
(home-page "http://www.freedesktop.org/wiki/Software/pkg-config")
(license gpl2+)
(synopsis "Helper tool used when compiling applications and libraries")
diff --git a/gnu/packages/pth.scm b/gnu/packages/pth.scm
index ba5fb8216d..50385b14f8 100644
--- a/gnu/packages/pth.scm
+++ b/gnu/packages/pth.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2012 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2012, 2015 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2014 Mark H Weaver <mhw@netris.org>
;;;
;;; This file is part of GNU Guix.
@@ -37,12 +37,7 @@
"0ckjqw5kz5m30srqi87idj7xhpw6bpki43mj07bazjm2qmh3cdbj"))))
(build-system gnu-build-system)
(arguments
- '(#:parallel-build? #f
- ;; By default, man pages are put in PREFIX/man,
- ;; but we want them in PREFIX/share/man.
- #:configure-flags (list (string-append "--mandir="
- (assoc-ref %outputs "out")
- "/share/man"))))
+ '(#:parallel-build? #f))
(home-page "http://www.gnu.org/software/pth")
(synopsis "Portable thread library")
(description
diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm
index 162acec639..c2eab7dc6d 100644
--- a/gnu/packages/python.scm
+++ b/gnu/packages/python.scm
@@ -198,7 +198,7 @@
(native-search-paths
(list (search-path-specification
(variable "PYTHONPATH")
- (directories '("lib/python2.7/site-packages")))))
+ (files '("lib/python2.7/site-packages")))))
(home-page "http://python.org")
(synopsis
"High-level, dynamically-typed programming language")
@@ -237,7 +237,7 @@ data types.")
(native-search-paths
(list (search-path-specification
(variable "PYTHONPATH")
- (directories '("lib/python3.3/site-packages")))))))
+ (files '("lib/python3.3/site-packages")))))))
(define-public python-wrapper
(package (inherit python)
diff --git a/gnu/packages/ruby.scm b/gnu/packages/ruby.scm
index 4b6665cb6b..f8276db698 100644
--- a/gnu/packages/ruby.scm
+++ b/gnu/packages/ruby.scm
@@ -77,10 +77,9 @@
(native-search-paths
(list (search-path-specification
(variable "GEM_PATH")
- (directories
- (list (string-append "lib/ruby/gems/"
- (version-major+minor version)
- ".0"))))))
+ (files (list (string-append "lib/ruby/gems/"
+ (version-major+minor version)
+ ".0"))))))
(synopsis "Programming language interpreter")
(description "Ruby is a dynamic object-oriented programming language with
a focus on simplicity and productivity.")
diff --git a/gnu/packages/tcl.scm b/gnu/packages/tcl.scm
index d988249c4c..2de2624df4 100644
--- a/gnu/packages/tcl.scm
+++ b/gnu/packages/tcl.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2013, 2014 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2013, 2014, 2015 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2014 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2014 Eric Bavier <bavier@member.fsf.org>
;;;
@@ -63,12 +63,6 @@
"tclsh")))))
%standard-phases))
- ;; By default, man pages are put in PREFIX/man,
- ;; but we want them in PREFIX/share/man.
- #:configure-flags (list (string-append "--mandir="
- (assoc-ref %outputs "out")
- "/share/man"))
-
;; XXX: There are a few test failures (related to HTTP, most
;; likely related to name resolution), but that doesn't cause
;; `make' to fail.
diff --git a/gnu/packages/version-control.scm b/gnu/packages/version-control.scm
index dd41794b39..47b4692d7c 100644
--- a/gnu/packages/version-control.scm
+++ b/gnu/packages/version-control.scm
@@ -696,7 +696,7 @@ accessed and migrated on modern systems.")
(inputs
`(("e2fsprogs" ,e2fsprogs)
("curl" ,curl)
- ("file" ,file-5.20) ;work around CVE-2014-3710
+ ("file" ,file)
("libxml2" ,libxml2)
("zlib" ,zlib)
("gettext" ,gnu-gettext)))
diff --git a/gnu/packages/web.scm b/gnu/packages/web.scm
index 1ff3dfb5a5..8a64211697 100644
--- a/gnu/packages/web.scm
+++ b/gnu/packages/web.scm
@@ -644,16 +644,7 @@ help you implement simple HTTP servers.")
;; Uncommenting the next two lines may assist in debugging
;; (substitute* "docs/man5/Makefile" (("a2x") "a2x -v"))
;; (setenv "XML_DEBUG_CATALOG" "1")
-
- (setenv "XML_CATALOG_FILES"
- (string-append
- (assoc-ref inputs "docbook-xsl")
- "/xml/xsl/docbook-xsl-1.78.1/catalog.xml"
- ;; Contrary to the documentation, the file names must
- ;; be separated by a space, not a colon.
- " "
- (assoc-ref inputs "docbook-xml")
- "/xml/dtd/docbook/catalog.xml")))
+ #t)
%standard-phases)))
;; All of the below are used to generate the documentation
;; (Should they be propagated inputs of asciidoc ??)
diff --git a/gnu/packages/xfce.scm b/gnu/packages/xfce.scm
index 2b15c3e35c..17b2b4d9f7 100644
--- a/gnu/packages/xfce.scm
+++ b/gnu/packages/xfce.scm
@@ -267,7 +267,7 @@ management D-Bus specification.")
(native-search-paths
(list (search-path-specification
(variable "X_XFCE4_LIB_DIRS")
- (directories '("lib/xfce4")))))
+ (files '("lib/xfce4")))))
(home-page "http://www.xfce.org/")
(synopsis "Xfce desktop panel")
(description
diff --git a/gnu/packages/xiph.scm b/gnu/packages/xiph.scm
index 77b732ba35..e6700c4c27 100644
--- a/gnu/packages/xiph.scm
+++ b/gnu/packages/xiph.scm
@@ -202,12 +202,7 @@ OpenBSD's sndio.")
"1p0hh190kqvpkbk1bbajd81jfbmkyl4fn2i7pggk2zppq6m68bgs"))))
(build-system gnu-build-system)
(arguments
- `(#:parallel-tests? #f
- ;; By default, man pages are put in PREFIX/man,
- ;; but we want them in PREFIX/share/man.
- #:configure-flags (list (string-append "--mandir="
- (assoc-ref %outputs "out")
- "/share/man"))))
+ `(#:parallel-tests? #f))
;; FIXME: configure also looks for xmms, input could be added once it exists
(inputs `(("libogg" ,libogg)))
(synopsis "Free lossless audio codec")
diff --git a/gnu/packages/xml.scm b/gnu/packages/xml.scm
index 76366db58c..f2b3baa418 100644
--- a/gnu/packages/xml.scm
+++ b/gnu/packages/xml.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2013, 2014 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2013, 2014, 2015 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2013 Andreas Enge <andreas@enge.fr>
;;;
;;; This file is part of GNU Guix.
@@ -68,6 +68,18 @@ things the parser might find in the XML document (like start tags).")
(inputs `(("zlib" ,zlib)))
(native-inputs `(("perl" ,perl)
("python" ,python-2))) ; incompatible with Python 3 (print syntax)
+
+
+ ;; $XML_CATALOG_FILES lists 'catalog.xml' files found in under the 'xml'
+ ;; sub-directory of any given package.
+ (native-search-paths (list (search-path-specification
+ (variable "XML_CATALOG_FILES")
+ (separator " ")
+ (files '("xml"))
+ (file-pattern "^catalog\\.xml$")
+ (file-type 'regular))))
+ (search-paths native-search-paths)
+
(arguments
`(#:phases
(alist-replace