| Age | Commit message (Expand) | Author |
|---|
| 2015-12-21 | build: Add bioconductor-uri procedure.•••* guix/build-system/r.scm (bioconductor-uri): New procedure.
| Ricardo Wurmus |
| 2015-12-21 | gnu: Add vmpk.•••* gnu/packages/music.scm (vmpk): New variable.
| Ricardo Wurmus |
| 2015-12-21 | gnu: Add drumstick.•••* gnu/packages/music.scm (drumstick): New variable.
| Ricardo Wurmus |
| 2015-12-21 | gnu: letsencrypt and acme: Update to 0.1.1.•••These packages should be updated together.
* gnu/packages/tls.scm (letsencrypt): Update to 0.1.1.
[source]: Use pypi-uri.
* gnu/packages/tls.scm (acme): Update to 0.1.1.
[source]: Use pypi-uri.
| Leo Famulari |
| 2015-12-21 | gnu: ffmpeg: Update to 2.8.4.•••* gnu/packages/video.scm (ffmpeg): Update to 2.8.4.
| Efraim Flashner |
| 2015-12-21 | doc: Be more explicit in example of file-systems configuration.•••* gnu/system/examples/bare-bones.tmpl (file-systems): Change device
label.
* gnu/system/examples/desktop.tmpl (file-systems): Likewise.
| Leo Famulari |
| 2015-12-21 | doc: Explain significance of partition labels.•••* doc/guix.texi (Preparing for Installation): Point out relationship
between partition labels and the file-system configuration.
| Leo Famulari |
| 2015-12-21 | gnu: grub: Add fix for CVE-2015-8730.•••* gnu/packages/patches/grub-CVE-2015-8370.patch: New file.
* gnu-system.am (dist_patch_DATA): Register patch.
* gnu/packages/grub.scm: Apply patch.
| Leo Famulari |
| 2015-12-21 | gnu: Add GenomicRanges.•••* gnu/packages/bioinformatics.scm (r-genomicranges): New variable.
| Ricardo Wurmus |
| 2015-12-21 | gnu: Add XVector.•••* gnu/packages/bioinformatics.scm (r-xvector): New variable.
| Ricardo Wurmus |
| 2015-12-21 | gnu: Add GenomeInfoDb.•••* gnu/packages/bioinformatics.scm (r-genomeinfodb): New variable.
| Ricardo Wurmus |
| 2015-12-21 | gnu: Add IRanges.•••* gnu/packages/bioinformatics.scm (r-iranges): New variable.
| Ricardo Wurmus |
| 2015-12-21 | gnu: Add S4Vectors.•••* gnu/packages/bioinformatics.scm (r-s4vectors): New variable.
| Ricardo Wurmus |
| 2015-12-21 | gnu: Add BiocGenerics.•••* gnu/packages/bioinformatics.scm (r-biocgenerics): New variable.
| Ricardo Wurmus |
| 2015-12-21 | gnu: Add r-acsnminer.•••* gnu/packages/bioinformatics.scm (r-acsnminer): New variable.
| Ricardo Wurmus |
| 2015-12-21 | gnu: Add r-gridextra.•••* gnu/packages/statistics.scm (r-gridextra): New variable.
| Ricardo Wurmus |
| 2015-12-21 | gnu: Add r-gtable.•••* gnu/packages/statistics.scm (r-gtable): New variable.
| Ricardo Wurmus |
| 2015-12-21 | gnu: Add r-rmarkdown.•••* gnu/packages/statistics.scm (r-rmarkdown): New variable.
* gnu/packages/haskell.scm: Do not select libxml2 from the xml module to
prevent circular package module imports.
| Ricardo Wurmus |
| 2015-12-21 | gnu: Add r-catools.•••* gnu/packages/statistics.scm (r-catools): New variable.
| Ricardo Wurmus |
| 2015-12-21 | gnu: Add r-bitops.•••* gnu/packages/statistics.scm (r-bitops): New variable.
| Ricardo Wurmus |
| 2015-12-21 | gnu: Add AdaptiveSparsity.•••* gnu/packages/machine-learning.scm (r-adaptivesparsity): New variable.
| Ricardo Wurmus |
| 2015-12-21 | gnu: Add r-rcpparmadillo.•••* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): New variable.
* gnu/packages/statistics.scm (r-rcpparmadillo): New variable.
| Ricardo Wurmus |
| 2015-12-21 | gnu: Add armadillo.•••* gnu/packages/maths.scm (armadillo): New variable.
| Ricardo Wurmus |
| 2015-12-21 | doc: Fix outdated claim about CRAN importer.•••* doc/guix.texi: The CRAN importer no longer extracts information from
the HTML package description but from the package's DESCRIPTION file.
| Ricardo Wurmus |
| 2015-12-21 | import: Drop empty list items.•••* guix/import/cran.scm (listify): Remove empty strings from result list.
| Ricardo Wurmus |
| 2015-12-21 | http-client: Support basic authentication.•••* guix/http-client.scm (http-fetch): Add Authorization header to request
when the URI contains userinfo.
| Ricardo Wurmus |
| 2015-12-21 | gnu: Add libgit2.•••* gnu/packages/version-control.scm (libgit2): New variable.
| Ricardo Wurmus |
| 2015-12-21 | gnu: mafft: Update to 7.267.•••* gnu/packages/bioinformatics.scm (mafft): Update to 7.267.
[arguments]: Don't include mafft-homologs manpage.
[inputs]: Add gawk and grep.
[propagated-inputs]: Add coreutils.
| Ben Woodcroft |
| 2015-12-21 | gnu: rxvt-unicode: Install the terminal capability data.•••This provides the necessary terminal capability data, which are required
by ncurses-based applications.
* gnu/packages/xdisorg.scm (rxvt-unicode)[native-inputs]: Add ncurses.
[arguments]: Set the destination of the terminfo files.
[native-search-path]: New field. Make them automatically available to
the user.
| Mathieu Lirzin |
| 2015-12-21 | gnu: msmtp: Update to 1.6.3.•••* gnu/packages/mail.scm (msmtp): Update to 1.6.3.
[inputs]: Add libsecret.
| Efraim Flashner |
| 2015-12-21 | gnu: claws-mail: Update to 3.13.1.•••* gnu/packages/mail.scm (claws-mail): Update to 3.13.1.
| Efraim Flashner |
| 2015-12-21 | gnu: python-cython: Update to 0.23.4.•••* gnu/packages/python.scm (python-cython): Update to 0.23.4.
| Efraim Flashner |
| 2015-12-20 | gnu: ruby: Update to 2.2.4.•••This version fixes CVE-2015-7551.
* gnu/packages/ruby.scm (ruby): Update to 2.2.4.
| David Thompson |
| 2015-12-20 | lint: The CPE name of GRUB is "grub2".•••Reported by Leo Famulari.
* guix/scripts/lint.scm (package-name->cpe-name): Add "grub".
| Ludovic Courtès |
| 2015-12-20 | packages: Remove now redundant graph procedures.•••These procedures are now redundant with those in (guix graph) and are no
longer used since commit a51cbecb.
* gnu/packages.scm (vhash-refq, package-dependencies)
(package-direct-dependents, package-transitive-dependents)
(package-covering-dependents): Remove.
| Ludovic Courtès |
| 2015-12-20 | profiles: Honor search paths of propagated inputs.•••Fixes <http://bugs.gnu.org/22073>.
Reported by Federico Beffa <beffa@ieee.org>.
* guix/profiles.scm (package->manifest-entry): Use
'package-transitive-native-search-paths' when computing
'search-paths' field.
* tests/profiles.scm ("package->manifest-entry, search paths"): New test.
| Ludovic Courtès |
| 2015-12-20 | packages: Add 'package-transitive-native-search-paths'.•••* guix/packages.scm (package-transitive-native-search-paths): New
procedure.
* tests/packages.scm ("package-transitive-native-search-paths"): New
test.
| Ludovic Courtès |
| 2015-12-20 | gnu: offlineimap: Update to 6.6.0.•••* gnu/packages/mail.scm (offlineimap): Update to 6.6.0.
| Efraim Flashner |
| 2015-12-20 | gnu: gnupg: Update to 1.4.20.•••* gnu/packages/gnupg.scm (gnupg-1): Update to 1.4.20.
| Efraim Flashner |
| 2015-12-20 | gnu: Add gnome-shell.•••* gnu/packages/gnome.scm (gnome-shell): New variable.
| 宋文武 |
| 2015-12-20 | gnu: Add gnome-control-center.•••* gnu/packages/gnome.scm (gnome-control-center): New variable.
| 宋文武 |
| 2015-12-20 | gnu: Add gnome-bluetooth.•••* gnu/packages/gnome.scm (gnome-bluetooth): New variable.
| 宋文武 |
| 2015-12-20 | gnu: Add libgtop.•••* gnu/packages/gnome.scm (libgtop): New variable.
| 宋文武 |
| 2015-12-20 | gnu: Add colord-gtk.•••* gnu/packages/freedesktop.scm (colord-gtk): New variable.
| 宋文武 |
| 2015-12-20 | gnu: Add telepathy-logger.•••* gnu/packages/freedesktop.scm (telepathy-logger): New variable.
| 宋文武 |
| 2015-12-20 | gnu: tilda: Update to 1.3.1.•••* gnu/packages/terminals.scm (tilda): Update to 1.3.1.
| Efraim Flashner |
| 2015-12-19 | gnu: Add tlsdate.•••* gnu/packages/ntp.scm (tlsdate): New variable.
| Ludovic Courtès |
| 2015-12-19 | gnu: mpv: Update to 0.14.0.•••* gnu/packages/video.scm (mpv): Update to 0.14.0.
| 宋文武 |
| 2015-12-19 | gnu: mpv: Fix build by using pkg-config for smbclient.•••This is a followup to commit 710964d.
* gnu/packages/video.scm (mpv)[arguments]: Remove 'patch-wscript' phase.
| 宋文武 |
| 2015-12-19 | gnu: agg: Update URLs.•••* gnu/packages/graphics.scm (agg)[source, home-page]: Add up-to-date
URLs.
| Ludovic Courtès |
