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2021-06-01publish: Preserve the request connection header.Mathieu Othacehe
The Guile web server is reading the response connection header to decide whether to close the connection. However, as the request connection header is not forwarded to the response, this mechanism cannot work. * guix/scripts/publish.scm (add-extra-headers): New procedure. (make-request-handler): Use it to forward the request connection header to the response.
2021-06-01progress: Add a download-size argument to progress-report-port.Mathieu Othacehe
* guix/progress.scm (progress-report-port): Add a download-size argument.
2021-05-31services: dnsmasq: Extend 'activation-service'.Brice Waegeneire
* gnu/services/dns.scm (dnsmasq-activation): New procedure … (dnsmasq-service-type): … use it.
2021-05-31services: hostapd: Use package from configuration.Brice Waegeneire
* gnu/services/networking.scm (hostapd-shepherd-services): Replace 'hostapd' by the package specified in the configuration.
2021-05-31tests: Fix loadable-kernel-modules-service tests.Brice Waegeneire
* gnu/tests/linux-modules.scm (run-loadable-kernel-modules-service-test): Actually load the modules with kernel-module-loader-service-type. Use a singleton service instead of defining a custom one. * doc/guix.texi (Service Reference): To give an example of linux-loadable-module-service-type use a singleton instead of defining a new service.
2021-05-31gnu: emacs-tramp: Update to 2.5.0.5.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-tramp): Update to 2.5.0.5.
2021-05-31gnu: emacs-solaire-mode: Update to 2.0.0.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-solaire-mode): Update to 2.0.0.
2021-05-31gnu: texmacs: Update to 1.99.21.Nicolas Goaziou
* gnu/packages/text-editors.scm (texmacs): Update to 1.99.21.
2021-05-31gnu: emacs-moody: Update to 0.5.5.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-moody): Update to 0.5.5.
2021-05-31gnu: emacs-posframe: Update to 1.0.3.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-posframe): Update to 1.0.3.
2021-05-31gnu: lagrange: Update to 1.5.0.Solene Rapenne via Guix-patches via
* gnu/packages/web-browsers.scm (lagrange): Update to 1.5.0. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-31gnu: Add emacs-eyebrowse.Stefan Reichör
* gnu/packages/emacs-xyz.scm (emacs-eyebrowse): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-31gnu: Add python-easy-ansi.Stefan Reichör
* gnu/packages/python-xyz.scm (python-easy-ansi): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-31gnu: Add emacs-evil-paredit.Xinglu Chen
* gnu/packages/emacs-xyz.scm (emacs-evil-paredit): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-31gnu: tome4: Update to 1.7.3.Solene Rapenne via Guix-patches via
* gnu/packages/games.scm (tome4): Update to 1.7.3. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-31gnu: bits: Use git-version and git-file-name.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (bits)[version]: Use git-version. [source]: Use git-file-name.
2021-05-31gnu: piranha: Use git-version.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (piranha)[version]: Use git-version.
2021-05-31gnu: r-chipkernels: Use git-version and git-file-name.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-chipkernels)[version]: Use git-version. [source]: Use git-file-name.
2021-05-31gnu: f-seq: Use git-version and git-file-name.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (f-seq)[version]: Use git-version. [source]: Use git-file-name.
2021-05-31gnu: bismark: Use git-file-name.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (bismark)[source]: Use git-file-name.
2021-05-31gnu: filevercmp: Use git-version.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (filevercmp)[version]: Use git-version; bind "revision" in outer let.
2021-05-31gnu: r-chipseeker: Move out of experiment section.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-chipseeker): Move the package from the "experiment" section to the section for regular Bioconductor packages.
2021-05-31gnu: r-spp: Move to (gnu packages bioconductor).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-spp): Move from here... * gnu/packages/bioconductor.scm (r-spp): ...to here.
2021-05-31gnu: r-geneoverlap: Move out of experiment section.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-geneoverlap): Move the package definition out of the "experiment" section into the section for regular Bioconductor packages.
2021-05-31gnu: r-phantompeakqualtools: Let-bind commit, set revision to 1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-phantompeakqualtools): Bind the commit outside of the package value. [version]: Use git-version. [source]: Use git-file-name.
2021-05-31gnu: r-methylkit: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-methylkit): Move from here... * gnu/packages/bioconductor.scm (r-methylkit): ...to here.
2021-05-31gnu: r-copywriter: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-copywriter): Move from here... * gnu/packages/bioconductor.scm (r-copywriter): ...to here.
2021-05-31gnu: r-copyhelper: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-copyhelper): Move from here... * gnu/packages/bioconductor.scm (r-copyhelper): ...to here. [source]: Repalce 'string-append' by 'bioconductor-uri' with 'experiment.
2021-05-31gnu: r-chipseq: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-chipseq): Move from here... * gnu/packages/bioconductor.scm (r-chipseq): ...to here.
2021-05-31gnu: r-rhdf5: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-rhdf5): Move from here... * gnu/packages/bioconductor.scm (r-rhdf5): ...to here.
2021-05-31gnu: r-annotationfilter: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-annotationfilter): Move from here... * gnu/packages/bioconductor.scm (r-annotationfilter): ...to here.
2021-05-31gnu: r-rhdf5filters: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-rhdf5filters): Move from here... * gnu/packages/bioconductor.scm (r-rhdf5filters): ...to here.
2021-05-31gnu: r-tximport: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-tximport): Move from here... * gnu/packages/bioconductor.scm (r-tximport): ...to here.
2021-05-31gnu: r-mutationalpatterns: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Move from here... * gnu/packages/bioconductor.scm (r-mutationalpatterns): ...to here.
2021-05-31gnu: r-rcas: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-rcas): Move from here... * gnu/packages/bioconductor.scm (r-rcas): ...to here.
2021-05-31gnu: r-bamsignals: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-bamsignals): Move from here... * gnu/packages/bioconductor.scm (r-bamsignals): ...to here.
2021-05-31gnu: r-rhtslib: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-rhtslib): Move from here... * gnu/packages/bioconductor.scm (r-rhtslib): ...to here.
2021-05-31gnu: r-zlibbioc: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-zlibbioc): Move from here... * gnu/packages/bioconductor.scm (r-zlibbioc): ...to here.
2021-05-31gnu: r-seqlogo: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-seqlogo): Move from here... * gnu/packages/bioconductor.scm (r-seqlogo): ...to here.
2021-05-31gnu: r-motifrg: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-motifrg): Move from here... * gnu/packages/bioconductor.scm (r-motifrg): ...to here.
2021-05-31gnu: r-sva: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-sva): Move from here... * gnu/packages/bioconductor.scm (r-sva): ...to here.
2021-05-31gnu: r-protgenerics: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-protgenerics): Move from here... * gnu/packages/bioconductor.scm (r-protgenerics): ...to here.
2021-05-31gnu: r-mzr: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-mzr): Move from here... * gnu/packages/bioconductor.scm (r-mzr): ...to here.
2021-05-31gnu: r-ensembldb: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-ensembldb): Move from here... * gnu/packages/bioconductor.scm (r-ensembldb): ...to here.
2021-05-31gnu: r-biovizbase: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-biovizbase): Move from here... * gnu/packages/bioconductor.scm (r-biovizbase): ...to here.
2021-05-31gnu: r-vsn: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-vsn): Move from here... * gnu/packages/bioconductor.scm (r-vsn): ...to here.
2021-05-31gnu: r-affyio: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-affyio): Move from here... * gnu/packages/bioconductor.scm (r-affyio): ...to here.
2021-05-31gnu: r-organismdbi: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-organismdbi): Move from here... * gnu/packages/bioconductor.scm (r-organismdbi): ...to here.
2021-05-31gnu: r-dirichletmultinomial: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-dirichletmultinomial): Move from here... * gnu/packages/bioconductor.scm (r-dirichletmultinomial): ...to here.
2021-05-31gnu: r-genomicfiles: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-genomicfiles): Move from here... * gnu/packages/bioconductor.scm (r-genomicfiles): ...to here.
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