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2019-07-26gexp: 'program-file' honors the current system and cross-compilation target....Fixes <https://bugs.gnu.org/36813>. Reported by Jakob L. Kreuze <zerodaysfordays.sdf.org@sdf.org>. * guix/gexp.scm (program-file-compiler): Pass #:system and #:target to 'gexp->script'. (load-path-expression): Add #:system and #:target and honor them. (gexp->script): Likewise. * tests/gexp.scm ("program-file #:system"): New test. * doc/guix.texi (G-Expressions): Adjust accordingly. Ludovic Courtès
2019-07-26gexp: 'compiled-modules' can cross-compile....* guix/gexp.scm (compiled-modules): Add #:target and honor it. Ludovic Courtès
2019-07-26discovery: 'scheme-files' ignores hidden files....* guix/discovery.scm (scheme-files)[dot-prefixed?]: New procedure. Use it to exclude any file starting with ".". Ludovic Courtès
2019-07-26tests: Add reconfigure system test....[[PGP Signed Part:No public key for F506FD169D8FD95A created at 2019-07-24T18:35:10+0200 using RSA]] * gnu/tests/reconfigure.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Jakob L. Kreuze
2019-07-26guix system: Reimplement 'reconfigure'....* guix/scripts/system.scm (switch-to-system) (upgrade-shepherd-services, install-bootloader): Delete variable. (local-eval): New variable. (install): Remove 'bootloader-installer' and 'bootcfg-file' parameters. (install): Add 'bootloader' parameter. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Jakob L. Kreuze
2019-07-26guix system: Add 'reconfigure' module....* guix/scripts/system/reconfigure.scm: New file. * Makefile.am (MODULES): Add it. * guix/scripts/system.scm (bootloader-installer-script): Export variable. * gnu/machine/ssh.scm (switch-to-system, upgrade-shepherd-services) (install-bootloader): Delete variable. * gnu/machine/ssh.scm (deploy-managed-host): Rewrite procedure. * gnu/services/herd.scm (live-service): Export variable. * gnu/services/herd.scm (live-service-canonical-name): New variable. * tests/services.scm (live-service): Delete variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Jakob L. Kreuze
2019-07-26gnu: sdl2: Update to 2.0.10....* gnu/packages/sdl.scm (sdl2): Update to 2.0.10. Rutger Helling
2019-07-26guix build: '--with-commit' recognizes "v[0-9]" tags....* guix/scripts/build.scm (transform-package-source-commit)[replace]: Special case COMMIT that starts with "v[0-9]". Ludovic Courtès
2019-07-26git: 'switch-to-ref' resolves tag targets....* guix/git.scm (switch-to-ref): In the 'tag' case, resolve the target of the tag. * tests/guix-build-branch.sh: Adjust test accordingly. Ludovic Courtès
2019-07-26git: <git-checkout> allows tags in its 'commit' field....Fixes <https://bugs.gnu.org/36371>. Reported by Tobias Geerinckx-Rice <me@tobias.gr>. * guix/git.scm (git-checkout-compiler): Pass 'tag-or-commit' to 'latest-repository-commit*'. * doc/guix.texi (Package Transformation Options): Update '--with-commit' documentation accordingly. * tests/guix-build-branch.sh: Add test. Ludovic Courtès
2019-07-26git: 'update-cached-checkout' supports a 'tag-or-commit' type of ref....* guix/git.scm (switch-to-ref)[obj]: Wrap in 'resolve' lambda. Add 'tag-or-commit' case. (update-cached-checkout): Document it. Ludovic Courtès
2019-07-26gnu: jami-client-gnome: Rename to 'jami'....* gnu/packages/telephony.scm (jami-client-gnome): Rename to... (jami): ... this. Update 'name' field accordingly. (jami-client-gnome): New variable. Ludovic Courtès
2019-07-26gnu: vlc: Update to 3.0.7.1....* gnu/packages/video.scm (vlc): Update to 3.0.7.1. Tobias Geerinckx-Rice
2019-07-26gnu: clusterssh: Run....* gnu/packages/admin.scm (clusterssh)[arguments]: Add ’augment-library-path’ phase so libraries are found. [propagated-inputs]: Make all of these… [inputs]: …regular. Tobias Geerinckx-Rice
2019-07-26gnu: youtube-dl: Update to 2019.07.16....* gnu/packages/video.scm (youtube-dl): Update to 2019.07.16. Tobias Geerinckx-Rice
2019-07-26gnu: dkimproxy: Fix dkim_responder.pl....* gnu/packages/mail.scm (dkimproxy)[arguments]: Wrap dkim_responder.pl. [inputs]: Add perl-mime-tools and perl-timedate. Tobias Geerinckx-Rice
2019-07-26gnu: dkimproxy: Factorise wrapping....This is a follow-up to 66e39000c612a9e16e6db709954582c6c0db8499, in a way, since it adds the forgotten *6 inputs. * gnu/packages/mail.scm (dkimproxy)[arguments]: Refactor ’make-wrapper’ phase. Add perl-io-socket-inet6 and perl-socket6 to the list. Tobias Geerinckx-Rice
2019-07-26gnu: dkimproxy: Keyword-stuff descriptions....* gnu/packages/mail.scm (dkimproxy)[synopsis]: Do so. [description]: Also. Tobias Geerinckx-Rice
2019-07-25gnu: perl-net-dns-resolver-mock: Edit synopsis & description....* gnu/packages/networking.scm (perl-net-dns-resolver-mock)[synopsis]: Remove unfortunate ‘a’. [description]: Fix typo. Edit for clarity. Tobias Geerinckx-Rice
2019-07-25gnu: perl-net-dns-resolver-mock: Unpropagate perl-net-dns....* gnu/packages/networking.scm (perl-net-dns-resolver-mock)[inputs]: Move perl-net-dns to here… [propagated-inputs]: …from here. Tobias Geerinckx-Rice
2019-07-25gnu: dkimproxy: Correct licence....* gnu/packages/mail.scm (dkimproxy)[license]: Change to gpl2+. Tobias Geerinckx-Rice
2019-07-25gnu: dkimproxy: Add IPv6 support....* gnu/packages/mail.scm (dkimproxy)[source]: Add patch. * gnu/packages/patches/dkimproxy-add-ipv6-support.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Tobias Geerinckx-Rice
2019-07-25gnu: libvirt: Don't use bogus cgroup....Should fix <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=36634>. * gnu/packages/virtualization.scm (libvirt)[source]: Add patch. * gnu/packages/patches/libvirt-remove-ATTRIBUTE_UNUSED.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Tobias Geerinckx-Rice
2019-07-25gnu: clusterssh: Don't propagate xterm....* gnu/packages/admin.scm (clusterssh)[arguments]: Add ‘refer-to-inputs’ and ‘delete-failing-tests’ phases. [inputs]: Move xterm to here… [propagated-inputs]: …from here. Tobias Geerinckx-Rice
2019-07-25gnu: clustershh: Add missing perl-sort-naturally input....* gnu/packages/admin.scm (clusterssh)[propagated-inputs]: Add perl-sort-naturally. Tobias Geerinckx-Rice
2019-07-25gnu: Add dkimproxy....* gnu/packages/mail.scm (dkimproxy): New variable. Julien Lepiller
2019-07-25gnu: Add perl-mail-dkim....* gnu/packages/mail.scm (perl-mail-dkim): New variable. Julien Lepiller
2019-07-25gnu: Add perl-net-dns-resolver-mock....* gnu/packages/networking.scm (perl-net-dns-resolver-mock): New variable. Julien Lepiller
2019-07-25gnu: Add perl-mail-authenticationresults....* gnu/packages/mail.scm (perl-mail-authenticationresults): New variable. Julien Lepiller
2019-07-25gnu: Go 1.12: Update to 1.12.7....* gnu/packages/golang.scm (go-1.12): Update to 1.12.7. Leo Famulari
2019-07-25gnu: Go 1.11: Update to 1.11.12....* gnu/packages/golang.scm (go-1.11): Update to 1.11.12. Leo Famulari
2019-07-25gnu: exim: Update to 4.92.1 [fixes CVE-2019-13917]....* gnu/packages/mail.scm (exim): Update to 4.92.1. Tobias Geerinckx-Rice
2019-07-25gnu: xpra: Update to 2.5.3....* gnu/packages/xorg.scm (xpra): Update to 2.5.3. Rutger Helling
2019-07-25gnu: Add xchm....* gnu/packages/ebook.scm (xchm): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Jovany Leandro G.C
2019-07-24gnu: starfighter: Update to 2.0.0.3....* gnu/packages/games.scm (starfighter): Update to 2.0.0.3. [source]: Use url-fetch and remove 'file-name' field. [native-inputs]: Remove autoconf and automake. Kei Kebreau
2019-07-25gnu: Explicitly refer to 'guile-json-1' when needed....* gnu/packages/bioinformatics.scm (rcas-web)[inputs]: Change 'guile-json' to 'guile-json-1'. * gnu/packages/ci.scm (cuirass)[inputs]: Likewise. * gnu/packages/guile-xyz.scm (artanis)[inputs]: Likewise. * gnu/packages/guile-xyz.scm (jupyter-guile-kernel)[inputs]: Likewise. * gnu/packages/guile-xyz.scm (guile-mastodon)[inputs]: Likewise. * gnu/packages/mail.scm (mumi)[inputs]: Likewise. * gnu/packages/package-management.scm (guix)[inputs]: Likewise. * gnu/packages/package-management.scm (guix-daemon)[inputs]: Likewise. * gnu/packages/web.scm (hpcguix-web)[inputs]: Likewise. Ludovic Courtès
2019-07-25gnu: guile-json: Define 'guile-json-1'....* gnu/packages/guile.scm (guile-json-1): New variable. Ludovic Courtès
2019-07-25maint: Switch to Guile-JSON 3.x....Guile-JSON 3.x is incompatible with Guile-JSON 1.x, which we relied on until now: it maps JSON dictionaries to alists (instead of hash tables), and JSON arrays to vectors (instead of lists). This commit is about adjusting all the existing code to this new mapping. * m4/guix.m4 (GUIX_CHECK_GUILE_JSON): New macro. * configure.ac: Use it. * doc/guix.texi (Requirements): Mention the Guile-JSON version. * guix/git-download.scm (git-fetch)[guile-json]: Use GUILE-JSON-3. * guix/import/cpan.scm (string->license): Expect vectors instead of lists. (module->dist-name): Use 'json-fetch' instead of 'json-fetch-alist'. (cpan-fetch): Likewise. * guix/import/crate.scm (crate-fetch): Likewise, and call 'vector->list' for DEPS. * guix/import/gem.scm (rubygems-fetch): Likewise. * guix/import/json.scm (json-fetch-alist): Remove. * guix/import/pypi.scm (pypi-fetch): Use 'json-fetch' instead of 'json-fetch-alist'. (latest-source-release, latest-wheel-release): Call 'vector->list' on RELEASES. * guix/import/stackage.scm (stackage-lts-info-fetch): Use 'json-fetch' instead of 'json-fetch-alist'. (lts-package-version): Use 'vector->list'. * guix/import/utils.scm (hash-table->alist): Remove. (alist->package): Pass 'vector->list' on the inputs fields, and default to the empty vector. * guix/scripts/import/json.scm (guix-import-json): Remove call to 'hash-table->alist'. * guix/swh.scm (define-json-reader): Expect pair? or null? instead of hash-table?. [extract-field]: Use 'assoc-ref' instead of 'hash-ref'. (json->branches): Use 'map' instead of 'hash-map->list'. (json->checksums): Likewise. (json->directory-entries, origin-visits): Call 'vector->list' on the result of 'json->scm'. * tests/import-utils.scm ("alist->package with dependencies"): New test. * gnu/installer.scm (build-compiled-file)[builder]: Use GUILE-JSON-3. * gnu/installer.scm (installer-program)[installer-builder]: Likewise. * gnu/installer/locale.scm (iso639->iso639-languages): Use 'assoc-ref' instead of 'hash-ref', and pass vectors through 'vector->list'. (iso3166->iso3166-territories): Likewise. * gnu/system/vm.scm (system-docker-image)[build]: Use GUILE-JSON-3. * guix/docker.scm (manifest, config): Adjust for Guile-JSON 3. * guix/scripts/pack.scm (docker-image)[build]: Use GUILE-JSON-3. * guix/import/github.scm (fetch-releases-or-tags): Update docstring. (latest-released-version): Use 'assoc-ref' instead of 'hash-ref'. Pass the result of 'fetch-releases-or-tags' to 'vector->list'. * guix/import/launchpad.scm (latest-released-version): Likewise. Ludovic Courtès
2019-07-24gnu: Add r-depecher....* gnu/packages/bioconductor.scm (r-depecher): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Signed-off-by: Ricardo Wurmus <rekado@elephly.net> zimoun
2019-07-24gnu: Add r-mixomics....* gnu/packages/bioconductor.scm (r-mixomics): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> zimoun
2019-07-24gnu: Add r-flowsom....* gnu/packages/bioconductor.scm (r-flowsom): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> zimoun
2019-07-24gnu: Add r-flowmeans....* gnu/packages/bioconductor.scm (r-flowmeans): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> zimoun
2019-07-24gnu: Add r-consensusclusterplus....* gnu/packages/bioconductor.scm (r-consensusclusterplus): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> zimoun
2019-07-24gnu: Add r-flowutils....* gnu/packages/bioconductor.scm (r-flowutils): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> zimoun
2019-07-24gnu: Add r-flowcore....* gnu/packages/bioconductor.scm (r-flowcore): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> zimoun
2019-07-24gnu: Add r-all....* gnu/packages/bioconductor.scm (r-all): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> zimoun
2019-07-24gnu: Add r-kableextra....* gnu/packages/cran.scm (r-kableextra): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> zimoun
2019-07-24gnu: Add r-umap....* gnu/packages/cran.scm (r-umap): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> zimoun
2019-07-24gnu: emacs-gitpatch: Update to 0.5.1....* gnu/packages/emacs-xyz.scm (emacs-gitpatch): Update to 0.5.1. Jelle Licht
2019-07-24gnu: terminator: Propagate gsettings-desktop-schemas....* gnu/packages/gnome.scm (terminator)[propagated-inputs]: Add gsettings-desktop-schemas. Tobias Geerinckx-Rice
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