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2023-06-09linux-container: Adjust to 'modify-services' semantic change.Ludovic Courtès
This is a followup to dbbc7e946131ba257728f1d05b96c4339b7ee88b: 'nscd-service-type' isn't necessarily present in OS, so we cannot use the 'modify-services' as it would now error out. This was happening with the "guix system docker-image" test in 'tests/guix-system.sh'. * gnu/system/linux-container.scm (containerized-operating-system): Use 'filter-map' instead of 'remove' + 'modify-services'.
2023-06-09gnu: Add python-mudata.Navid Afkhami
* gnu/packages/bioinformatics.scm (python-mudata): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2023-06-09gnu: Add python-mofax.Navid Afkhami
* gnu/packages/bioinformatics.scm (python-mofax): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2023-06-09gnu: Add python-sacrebleu.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-sacrebleu): New variable.
2023-06-09gnu: Add python-portalocker.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-portalocker): New variable.
2023-06-09gnu: lapack: Build CBLAS.Ludovic Courtès
This adds libcblas.so, which users typically expect to have. * gnu/packages/maths.scm (lapack)[arguments]: Pass "-DCBLAS=ON".
2023-06-09records: Remove "guix" from error message.Ludovic Courtès
* guix/records.scm (map-fields): Tweak error message.
2023-06-09system: account: Fix default value.Ludovic Courtès
Fixes a regression introduced in 66ecffbeba0685ff2f1071db8aeb2393986afb97. * gnu/system/shadow.scm (account-service-type)[default-value]: Change to the empty list.
2023-06-09tests: Ensure 'elpa' test does not access the network.Ludovic Courtès
Previously it would try to access the real elpa.gnu.org. This would succeed when network is available because "taxy-magit-section" is an existing package. * guix/import/elpa.scm (elpa-repository) (package-from-elpa-repository?): Recognize 'gnu/http. * tests/elpa.scm ("package-latest-release"): Use 'http' instead of 'https'. Change "taxy-magit-section" to "fake-taxy-magit-section".
2023-06-09tests: Ensure 'cpan' updater test does not access the network.Ludovic Courtès
Previously it would try to access the real metacpan.org. This would succeed when network is available because "Test-Script" is an existing package. * tests/cpan.scm ("package-latest-release"): Wrap 'upstream-source-inputs' call in 'parameterize'. Set 'current-http-proxy'. Change the order of responses in 'with-http-server'.
2023-06-09import: stackage: Updater resolves inputs lazily.Ludovic Courtès
Fixes the "haskell-stackage" test in 'tests/lint.scm', which started failing with e6223017d95bc615b2648f0798d9a3904d5b5f57 because the extra HTTP GETs induced by the 'haskell-fetch' calls would fail. * guix/import/stackage.scm (latest-lts-release): Call 'hackage-fetch' and its continuation from within 'inputs', which is delayed. Pass it NAME-VERSION instead of HACKAGE-NAME-VERSION.
2023-06-09tests: Adjust minetest tests.Ludovic Courtès
Fixes a regression introduced in e7910f4882d520fcf8920df9ff4ddb00eb9ee41d. * tests/minetest.scm (call-with-packages): Add #:timeout parameter to 'http-fetch' mock.
2023-06-09gnu: hubbub: Fix build.Andy Tai
* gnu/packages/web.scm (hubbub)[source]: Add patch. * gnu/packages/patches/hubbub-maybe-uninitialized.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Andreas Enge <andreas@enge.fr>
2023-06-09gnu: opencv: Fix building on aarch64.Efraim Flashner
* gnu/packages/image-processing.scm (opencv)[arguments]: When building for aarch64 adjust the 'disable-broken-tests phase to make the test suite pass.
2023-06-09gnu: tbb: Fix building on riscv64-linux.Efraim Flashner
* gnu/packages/tbb.scm (tbb)[arguments]: When building for riscv64-linux always link the test suite with -latomic.
2023-06-08gnu: Add tmux-plugin-continuum.EuAndreh
* gnu/packages/tmux.scm (tmux-plugin-continuum): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-06-08gnu: octave-cli: Update to 8.2.0Andy Tai
* gnu/packages/maths.scm (octave-cli): Update to 8.2.0 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-06-08gnu: Add pandoc-include.Wiktor Żelazny
* gnu/packages/textutils.scm (pandoc-include): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-06-08gnu: Add python-panflute.Wiktor Żelazny
* gnu/packages/textutils.scm (python-panflute): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-06-08gnu: Add ruby-minima.gemmaro
I added a test by `jekyll build`. * gnu/packages/ruby.scm (ruby-minima): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-06-08doc: Use the term "Procedure" for definitions.Ludovic Courtès
In an effort to homogenize things, commit 3c40dfe2851dd4ef48d2711f9f3531c06afbe1f2 replaced: @deffn {Scheme Procedure} with: @defun However, the latter prints "Function" when all existing material about Scheme uses the term "procedure". Thus, for consistency, this commit switches to: @deffn {Procedure} * doc/guix.texi, doc/contributing.texi: Use "@deffn {Procedure}" consistently rather than "@defun" or similar.
2023-06-08gnu: Add Buildah.Zongyuan Li
* gnu/packages/containers.scm (buildah): New variable. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2023-06-08gnu: Add swig@4.1.Andy Tai
* gnu/packages/swig.scm (swig-next): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-06-08gnu: flashrom: Wrap PATH to find dmidecode.Hilton Chain
* gnu/packages/flashing-tools.scm (flashrom)[inputs]: Add bash-minimal. [arguments]<#:phases>: Add phase 'wrap-program. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-06-08gnu: flashrom: Update to 1.3.0.Hilton Chain
* gnu/packages/patches/flashrom-fix-building-on-aarch64.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/flashing-tools.scm (flashrom): Update to 1.3.0. [build-system]: Switch to meson-build-system. [inputs]: Add libjaylink. [native-inputs]: Add cmocka. Actually, at least from 1.2, the exact \"dmidecode\" is not present in dmi.c. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-06-08gnu: Add rust-uom.Artyom V. Poptsov
* gnu/packages/crates-io.scm (rust-uom-0.34): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-06-08gnu: Add rogue.Jakob Kirsch
* gnu/packages/games.scm (rogue): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-06-08doc: Update outdated URL for Eudev wiki.Felix Lechner
Change was coordinated with upstream maintainer Boian Bonev. * doc/guix.texi: Update outdated URL for Eudev wiki. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-06-08doc: Replace reference to non-existing (gnu home services ssh-agent).Felix Lechner
Thanks to Alexandros Prekates and Markku Korkeala for pointing out the bug in the documentation. [1] [1] https://lists.gnu.org/archive/html/help-guix/2023-05/msg00220.html * doc/gnu.texi (Secure Shell): Replace reference to non-existing (gnu home services ssh-agent) Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-06-08substitute: Gracefully retry after failed partial downloads.Ludovic Courtès
Fixes <https://issues.guix.gnu.org/63443>. Reported by Attila Lendvai <attila@lendvai.name>. * guix/scripts/substitute.scm (catch-system-error): New macro. (download-nar): Add call to 'delete-file-recursively'. * tests/substitute.scm ("substitute, previous partial download around"): New test.
2023-06-08substitute: Delete cached narinfos more than two-month old.Ludovic Courtès
This allows 'guix substitute' to shrink the cache a bit more, which saves space and improves performance of cache-cleanup phases since fewer entries need to be traversed. * guix/scripts/substitute.scm (cached-narinfo-expiration-time): Define 'max-ttl' and use it as an upper bound.
2023-06-08import: Gracefully handle EPIPE.Ludovic Courtès
Previously, "guix import pypi f3 | head -3" would print a backtrace. * guix/scripts/import.scm (guix-import): Wrap 'pretty-print-with-comments' call in 'leave-on-EPIPE'.
2023-06-08gnu: sbcl: Fix build on armhf.Guillaume Le Vaillant
* gnu/packages/lisp.scm (sbcl)[source]: Update snippet.
2023-06-08gnu: xfce4-screensaver: Update to 4.18.2.宋文武
* gnu/packages/xfce.scm (xfce4-screensaver): Update to 4.18.2.
2023-06-08gnu: xfce4-power-manager: Update to 4.18.2.宋文武
* gnu/packages/xfce.scm (xfce4-power-manager): Update to 4.18.2.
2023-06-08gnu: xfce4-session: Update to 4.18.3.宋文武
* gnu/packages/xfce.scm (xfce4-session): Update to 4.18.3.
2023-06-08gnu: xfce4-pulseaudio-plugin: Update to 0.4.7.宋文武
* gnu/packages/xfce.scm (xfce4-pulseaudio-plugin): Update to 0.4.7.
2023-06-08gnu: xfce4-screenshooter: Update to 1.10.4.宋文武
* gnu/packages/xfce.scm (xfce4-screenshooter): Update to 1.10.4.
2023-06-08gnu: xfce4-panel: Update to 4.18.4.宋文武
* gnu/packages/xfce.scm (xfce4-panel): Update to 4.18.4.
2023-06-08gnu: libxfce4ui: Update to 4.18.4.宋文武
* gnu/packages/xfce.scm (libxfce4ui): Update to 4.18.4.
2023-06-08gnu: Add python-spacy.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-spacy): New variable.
2023-06-08gnu: Add python-pathy.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-pathy): New variable.
2023-06-08gnu: Add python-thinc.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-thinc): New variable.
2023-06-08gnu: Add python-blis-for-thinc.Ricardo Wurmus
* gnu/packages/maths.scm (python-blis-for-thinc): New variable.
2023-06-08gnu: Add python-spacy-loggers.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-spacy-loggers): New variable.
2023-06-08gnu: Add python-spacy-legacy.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-spacy-legacy): New variable.
2023-06-08gnu: yoshimi: Update to 2.3.0.Ricardo Wurmus
* gnu/packages/music.scm (yoshimi): Update to 2.3.0.
2023-06-08gnu: Add python-blis.Ricardo Wurmus
* gnu/packages/maths.scm (python-blis): New variable.
2023-06-08gnu: blis: Update to 0.9.0.Ricardo Wurmus
* gnu/packages/maths.scm (blis): Update to 0.9.0. [arguments]: Use G-expression; remove trailing #T from build phases.
2023-06-08gnu: Add python-confection.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-confection): New variable.
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