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2019-03-29gnu: Add r-ebimage....* gnu/packages/bioconductor.scm (r-ebimage): New variable. Ricardo Wurmus
2019-03-29gnu: Add r-aucell....* gnu/packages/bioconductor.scm (r-aucell): New variable. Ricardo Wurmus
2019-03-29gnu: Add r-allelicimbalance....* gnu/packages/bioconductor.scm (r-allelicimbalance): New variable. Ricardo Wurmus
2019-03-29gnu: Add r-annotationtools....* gnu/packages/bioconductor.scm (r-annotationtools): New variable. Ricardo Wurmus
2019-03-29gnu: Add r-annotationfuncs....* gnu/packages/bioconductor.scm (r-annotationfuncs): New variable. Ricardo Wurmus
2019-03-29gnu: Add r-abaenrichment....* gnu/packages/bioconductor.scm (r-abaenrichment): New variable. Ricardo Wurmus
2019-03-29gnu: Add r-gofuncr....* gnu/packages/bioconductor.scm (r-gofuncr): New variable. Ricardo Wurmus
2019-03-29gnu: Add r-abadata....* gnu/packages/bioconductor.scm (r-abadata): New variable. Ricardo Wurmus
2019-03-29gnu: Add r-mapplots....* gnu/packages/cran.scm (r-mapplots): New variable. Ricardo Wurmus
2019-03-29gnu: Add r-atacseqqc....* gnu/packages/bioconductor.scm (r-atacseqqc): New variable. Ricardo Wurmus
2019-03-29gnu: Add r-genomicscores....* gnu/packages/bioconductor.scm (r-genomicscores): New variable. Ricardo Wurmus
2019-03-29gnu: Add r-motifstack....* gnu/packages/bioconductor.scm (r-motifstack): New variable. Ricardo Wurmus
2019-03-29gnu: Add r-motiv....* gnu/packages/bioconductor.scm (r-motiv): New variable. Ricardo Wurmus
2019-03-29gnu: Add r-rgadem....* gnu/packages/bioconductor.scm (r-rgadem): New variable. Ricardo Wurmus
2019-03-29gnu: Add r-preseqr....* gnu/packages/cran.scm (r-preseqr): New variable. Ricardo Wurmus
2019-03-29gnu: Add r-bacon....* gnu/packages/bioconductor.scm (r-bacon): New variable. Ricardo Wurmus
2019-03-29gnu: php: Fix typo....Regression introduced in e8cfce439afed945e352ad28f73f0a5f7840f503. * gnu/packages/php.scm (php)[arguments]: Add missing 'else' branch of the 'if'. Change first argument to 'string-prefix?' to match GNU triplets as well. Ludovic Courtès
2019-03-29doc: Fix invalid uses of @ref....* doc/guix.texi (Invoking guix pull): Use @xref instead of @ref at the beginning of sentences. Ludovic Courtès
2019-03-29gnu: python-faiss: Fix building on non-Intel architectures....* gnu/packages/graph.scm (python-faiss)[arguments]: Adjust custom 'build-swig phase to change build flags for different archictures. Efraim Flashner
2019-03-29gnu: faiss: Fix building on non-Intel architectures....* gnu/packages/graph.scm (faiss)[source]: Add snippet to wrap Intel specific headers. [arguments]: Adjust custom 'prepare-build phase to adjust compile flags for different architectures. Efraim Flashner
2019-03-29gnu: stepmania: Fix all instances of accessing application data....This is a follow-up to commit 45aba232abe50b6642abfaa06030985c7febbe07. * gnu/packages/games.scm (stepmania)[arguments]: Rename phase ensure-gtk-module-can-be-found to ensure-application-files-can-be-found and fix remaining instances of application data access. Ricardo Wurmus
2019-03-29gnu: Stellarium: Update to 0.19.0....* gnu/packages/astronomy.scm (stellarium): Update to 0.19.0. [arguments]: Remove obsolete 'patch-tests' phase. Leo Famulari
2019-03-29gnu: stepmania: Fix loading of gtk module....Fixes <https://bugs.gnu.org/34854>. Suggested by Nicolas Goaziou. * gnu/packages/games.scm (stepmania)[arguments]: Add phase "ensure-gtk-module-can-be-found". Ricardo Wurmus
2019-03-29gnu: zynaddsubfx: Update to 3.0.4....* gnu/packages/music.scm (zynaddsubfx): Update to 3.0.4. Ricardo Wurmus
2019-03-29gnu: Add r-abseqr....* gnu/packages/bioconductor.scm (r-abseqr): New variable. Ricardo Wurmus
2019-03-29gnu: Add r-flexdashboard....* gnu/packages/cran.scm (r-flexdashboard): New variable. Ricardo Wurmus
2019-03-29gnu: r-png: Move to (gnu packages cran)....* gnu/packages/image.scm (r-png): Move from here... * gnu/packages/cran.scm (r-png): ...to here. Ricardo Wurmus
2019-03-29gnu: Add r-ggcorrplot....* gnu/packages/cran.scm (r-ggcorrplot): New variable. Ricardo Wurmus
2019-03-29gnu: Add openclonk....* gnu/packages/games.scm (openclonk): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Nicolas Goaziou
2019-03-29gnu: r-cairo: Update to 1.5-10....* gnu/packages/statistics.scm (r-cairo): Update to 1.5-10. [inputs]: Add zlib. Ricardo Wurmus
2019-03-29gnu: hyperrogue: Don't use NAME in hyperrogue-data....* gnu/packages/games.scm (hyperrogue)[native-inputs]: Hard code NAME in hyperrogue-data source URI. Tobias Geerinckx-Rice
2019-03-29gnu: quadrapassel: Don't use NAME in source URI....* gnu/packages/games.scm (quadrapassel)[source]: Hard-code NAME. Tobias Geerinckx-Rice
2019-03-29gnu: libmanette: Don't use NAME in source URI....* gnu/packages/games.scm (libmanette)[source]: Hard-code NAME. Tobias Geerinckx-Rice
2019-03-29gnu: frotz-dumb-terminal: Merge strings in URI....* gnu/packages/games.scm (frotz-dumb-terminal)[source]: Merge separate string components, probably from a naive ’s/name/"name"/’ substitution. Tobias Geerinckx-Rice
2019-03-29gnu: frotz: Don't use NAME in source URI....* gnu/packages/games.scm (frotz)[source]: Hard-code NAME. Tobias Geerinckx-Rice
2019-03-29gnu: fortune-mod: Don't use NAME in source COMMIT....* gnu/packages/games.scm (fortune-mod)[source]: Hard-code NAME. Tobias Geerinckx-Rice
2019-03-29gnu: lugaru: Don't use NAME in source URI....* gnu/packages/games.scm (lugaru)[source]: Hard-code NAME. Tobias Geerinckx-Rice
2019-03-29gnu: no-more-secrets: Don't use unstable tarball....* gnu/packages/games.scm (no-more-secrets)[source]: Use GIT-FETCH and GIT-FILE-NAME. Tobias Geerinckx-Rice
2019-03-29gnu: hyperrogue: Don't use NAME in source URI....* gnu/packages/games.scm (hyperrogue)[source]: Hard-code NAME. Tobias Geerinckx-Rice
2019-03-29gnu: mrrescue: Don't use NAME in source URI....* gnu/packages/games.scm (mrrescue)[source]: Hard-code NAME. Tobias Geerinckx-Rice
2019-03-29gnu: laby: Don't use NAME in source URI....* gnu/packages/games.scm (laby)[source]: Hard-code NAME. Tobias Geerinckx-Rice
2019-03-29gnu: Add python-bbknn....* gnu/packages/bioinformatics.scm (python-bbknn): New variable. Ricardo Wurmus
2019-03-29gnu: Add python-annoy....* gnu/packages/python-xyz.scm (python-annoy): New variable. Ricardo Wurmus
2019-03-29gnu: Add python-faiss....* gnu/packages/graph.scm (python-faiss): New variable. Ricardo Wurmus
2019-03-29gnu: Add faiss....* gnu/packages/graph.scm (faiss): New variable. Ricardo Wurmus
2019-03-29gnu: red-eclipse: Use GIT-FETCH for data sources....* gnu/packages/games.scm (red-eclipse): Update DATA-SOURCE hashes. [arguments]: COPY-RECURSIVELY instead of extracting tarballs. [inputs]: Use GIT-FETCH and GIT-FILE-NAME for all DATA-SOURCES. Tobias Geerinckx-Rice
2019-03-29gnu: chromium-bsu: Don't use NAME in source URI....* gnu/packages/games.scm (chromium-bsu)[source]: Hard-code NAME. Tobias Geerinckx-Rice
2019-03-29gnu: warzone2100: Update source URI....* gnu/packages/games.scm (warzone2100)[source]: Update URI and don't hard-code NAME. Tobias Geerinckx-Rice
2019-03-29gnu: grue-hunter: Don't use NAME in source URI....* gnu/packages/games.scm (grue-hunter)[source]: Hard-code NAME. Tobias Geerinckx-Rice
2019-03-29gnu: red-eclipse: Don't use unstable tarball....* gnu/packages/games.scm (red-eclipse)[source]: Use GIT-FETCH and GIT-FILE-NAME. Tobias Geerinckx-Rice
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