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2021-06-22gnu: java-commons-math3: Install to maven repository.Julien Lepiller
* gnu/packages/java.scm (java-commons-math3)[phases]: Use install-from-pom.
2021-06-22gnu: Add java-jopt-simple-4.Julien Lepiller
* gnu/packges/java.scm (java-jopt-simple-4): New variable. (java-jopt-simple): Install to maven repository structure.
2021-06-22guix: java-utils: Look for actual jar files.Julien Lepiller
* guix/build/java-utils.scm (install-from-pom): Fix `find-files` to look only for jar files.
2021-06-22guix: maven: Use a temporary file to fix pom files.Julien Lepiller
* guix/build/maven/pom.scm (fix-pom-dependencies): Actually use the temporary file that was created.
2021-06-22guix: maven: Look in local packages when searching for package version.Julien Lepiller
* guix/build/maven/pom.scm (fix-pom-dependencies): Also look at local packages when looking for a package version.
2021-06-22guix: maven: Support fixing modules.Julien Lepiller
* guix/build/maven/pom.scm (fix-pom-dependencies): Support fixing modules that do not exist. * guix/build/maven-build-system.scm (fix-pom): Fix modules.
2021-06-22guix: maven: Support fixing extensions.Julien Lepiller
* guix/build/maven/pom.scm (fix-pom-dependencies): Add support for fixing extension versions.
2021-06-22guix: maven: Simplify finding local packages and modules.Julien Lepiller
* guix/build/maven-build-system (fix-pom): Fix a single pom file without recursing (fix-pom-files): Find local packages and all submodules, and fix them all at once. (add-local-package): Move to... * guix/build/maven/pom.scm (add-local-package): ...here. (pom-and-submodules, pom-local-packages): New procedures.
2021-06-22guix: maven: Simplify finding version and group information.Julien Lepiller
* guix/build/maven/pom.scm (pom-version, pom-groupid): Do not use inputs and local packages information anymore. Adapt file to new arguments. * guix/build/maven-build-system.scm: Adapt to new arguments. * guix/build/java-utils.scm: Adapt to new arguments.
2021-06-22guix: java-utils: Factorize pom.xml generation.Julien Lepiller
* guix/build/java-utils.scm (generate-pom.xml): New procedure. * gnu/packages/maven.scm (java-surefire-junit4): Use it. * gnu/packages/java.scm (java-qdox, java-jsr250, java-jsr305) (java-aopalliance, java-jboss-el-api-spec) (java-jboss-interceptors-api-spec): Use it. (java-qdox-M9): Ensure the generated pom file has the correct version.
2021-06-22gnu: nyxt: Update to 2.1.0.Pierre Neidhardt
* gnu/packages/web-browsers.scm (nyxt): Update to 2.1.0.
2021-06-22gnu: libreoffice: Update to 7.1.4.2.Efraim Flashner
* gnu/packages/libreoffice.scm (libreoffice)[inputs]: Add box2d, dtoa. [arguments]: Adjust custom 'prepare-src, 'bin-and-desktop-install phases. Add custom 'insert-external-tarballs phase. Adjust configure-flags to build without skia. Remove deprecated make-flag
2021-06-22gnu: orcus: Update to 0.16.1.Efraim Flashner
* gnu/packages/libreoffice.scm (orcus): Update to 0.16.1.
2021-06-22gnu: orcus: Don't build static library.Efraim Flashner
* gnu/packages/libreoffice.scm (orcus)[arguments]: Add configure-flag to skip static library.
2021-06-22gnu: ixion: Update to 0.16.1.Efraim Flashner
* gnu/packages/libreoffice.scm (ixion): Update to 0.16.1.
2021-06-22gnu: ocaml-uri: Use a source file-name.Efraim Flashner
* gnu/packages/ocaml.scm (ocaml-uri)[source]: Add a file-name field.
2021-06-22gnu: emacs-shell-command+: Use a source file-name.Efraim Flashner
* gnu/packages/emacs-xyz.scm (emacs-shell-command+)[source]: Add a file-name field.
2021-06-22gnu: ensembl-vep: Use a source file-name.Efraim Flashner
* gnu/packages/bioinformatics.scm (ensembl-vep)[source]: Add a file-name field.
2021-06-22gnu: Add box2d.Efraim Flashner
* gnu/packages/game-development.scm (box2d): New variable.
2021-06-22gnu: libreoffice: Add vendor string.Efraim Flashner
Previously: This release was supplied by nixbld. Now: This release was supplied by GNU Guix. * gnu/packages/libreoffice.scm (libreoffice)[arguments]: Add configure-flag to set vendor to 'GNU Guix'.
2021-06-22gnu: Add rust-battery-0.7.Vinicius Monego
* gnu/packages/crates-io.scm (rust-battery-0.7): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-06-22gnu: rust-lazycell-1: Update to 1.3.0.Vinicius Monego
* gnu/packages/crates-io.scm (rust-lazycell-1): Update to 1.3.0. [arguments]: Remove #:skip-build. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-06-22gnu: Add rust-mach-0.3.Vinicius Monego
* gnu/packages/crates-io.scm (rust-mach-0.3): New variable. (rust-mach-0.2): Inherit from above. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-06-22gnu: Add rust-uom-0.30.Vinicius Monego
* gnu/packages/crates-io.scm (rust-uom-0.30): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-06-22gnu: Add rust-uom-0.31.Vinicius Monego
* gnu/packages/crates-io.scm (rust-uom-0.31): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-06-22gnu: emilua: Update to 0.3.2.Vinícius dos Santos Oliveira
* gnu/packages/lua.scm (emilua): Update to 0.3.2. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-06-22gnu: Add gopkg.in/yaml.v3.Sharlatan Hellseher
* gnu/packages/golang.scm (go-gopkg-in-yml-v3): New variable Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-06-22gnu: widelands: Update description.Nicolas Goaziou
* gnu/packages/games.scm (widelands)[description]: Update to mirror changes in the stable release.
2021-06-22gnu: widelands: Ensure Guix catches versioning scheme switch.Nicolas Goaziou
* gnu/packages/games.scm (widelands-21): New variable. "21" was the last beta release. Upstream has now switched to a new versioning scheme, with lesser numbers.
2021-06-22gnu: widelands: Update to 1.0.Felix Gruber
* gnu/packages/games.scm (widelands): Update to 1.0. [source]: Download from github as there is no tarball for v1.0 on their website. [inputs]: Add curl. * gnu/packages/patches/widelands-system-wide_minizip.patch: Adjust for 1.0. CmakeLists.txt now already defines CMAKE_MODULE_PATH, so I've moved FindMinizip.cmake to this path. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-06-22gnu: Add perl-cworld-dekker.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (perl-cworld-dekker): New variable.
2021-06-22gnu: python-ddt: Update to 1.4.2.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-ddt): Update to 1.4.2.
2021-06-22gnu: emacs-which-key: Update to 3.5.3.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-which-key): Update to 3.5.3.
2021-06-22gnu: dino: Enable some features.Raghav Gururajan
* gnu/packages/messaging.scm (dino): Add comments for v0.3.0 release. [inputs]: Add gspell and icu4c.
2021-06-22gnu: dino: Add missing inputs.Raghav Gururajan
These new inputs are referenced by the package but was missing in the package definition. Some of these inputs might have been used by the package indirectly via propagation from other inputs. * gnu/packages/messaging.scm (dino)[native-inputs]: Add gobject-introspection. [inputs]: Add atk, cairo, gdk-pixbug+svg, libnice and pango.
2021-06-22gnu: dino: Remove duplicate inputs.Raghav Gururajan
* gnu/packages/messaging.scm (dino)[inputs]: Remove duplicate gpgme, gtk+, glib-networking and gsettings-desktop-schemas.
2021-06-22gnu: uBlock Origin: Update to 1.36.0.Marius Bakke
* gnu/packages/browser-extensions.scm (uassets): Update to 20d21ad7e. (ublock-origin): Update to 1.36.0.
2021-06-22gnu: ungoogled-chromium: Update to 91.0.4472.114-0.a9eb6fd.Marius Bakke
* gnu/packages/chromium.scm (%chromium-version): Set to 91.0.4472.114. (%ungoogled-revision): Set to a9eb6fd. (%ungoogled-origin, ungoogled-chromium): Update hashes.
2021-06-21gnu: dovecot-pigeonhole: Update to 0.5.15 [fixes CVE-2020-28200].Tobias Geerinckx-Rice
* gnu/packages/mail.scm (dovecot-pigeonhole): Update to 0.5.15.
2021-06-21gnu: dovecot: Update to 2.3.15 [fixes CVE-2021-29157 & CVE-2021-33515].Tobias Geerinckx-Rice
* gnu/packages/mail.scm (dovecot): Update to 2.3.15.
2021-06-21import: egg: Edit egg->guix-package docstring.Tobias Geerinckx-Rice
* guix/import/egg.scm (egg->guix-package): Edit docstring.
2021-06-21gnu: capnproto: Fix typo in phase name.Tobias Geerinckx-Rice
* gnu/packages/serialization.scm (capnproto)[arguments]: Rename the 'use-tmp-for-tempory-files phase to 'use-tmp-for-temporary-files.
2021-06-21gnu: lxcfs: Fix typos in description.Tobias Geerinckx-Rice
* gnu/packages/virtualization.scm (lxcfs)[synopsis, description]: Fix typos.
2021-06-21gnu: font-overpass: Fix typo in description.Tobias Geerinckx-Rice
* gnu/packages/fonts.scm (font-overpass)[description]: Fix typo.
2021-06-21gnu: r-monocle3: Update to 1.0.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-monocle3): Update to 1.0.0. [propagated-inputs]: Add r-batchelor, r-leidenbase, and r-rsample.
2021-06-21gnu: Add r-leidenbase.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-leidenbase): New variable.
2021-06-21gnu: Add r-batchelor.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-batchelor): New variable.
2021-06-21gnu: Add r-residualmatrix.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-residualmatrix): New variable.
2021-06-21gnu: r-monocle3: Add missing input.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-monocle3)[propagated-inputs]: Add r-assertthat.
2021-06-21gnu: python-cfn-lint: Update to 0.51.0.Ricardo Wurmus
* gnu/packages/python-web.scm (python-cfn-lint): Update to 0.51.0. [arguments]: Delete another test that attempts to access the internet.
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