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2022-11-24gnu: emacs-flymake-mypy: Update to 0.3.0....* gnu/packages/emacs-xyz.scm (emacs-flymake-mypy): Update to 0.3.0. Nicolas Goaziou
2022-11-24gnu: burgerspace: Update to 1.9.5....* gnu/packages/games.scm (burgerspace): Update to 1.9.5. Nicolas Goaziou
2022-11-24gnu: emacs-inspector: Activate tests....* gnu/packages/emacs-xyz.scm (emacs-inspector)[arguments]: Add tests. Skip failing test. Fix compatibility with Emacs 28 and older. Nicolas Goaziou
2022-11-24gnu: emacs-inspector: Fix base version....* gnu/packages/emacs-xyz.scm (emacs-inspector)[version]: Use "0.8" as base version, which is the version from "inspector.el" instead of "tree-inspector.el". Nicolas Goaziou
2022-11-24gnu: linux-libre: Enable building info doc....* gnu/packages/patches/linux-libre-infodocs-target.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/linux.scm (linux-libre-6.0-source, linux-libre-5.15-source) (linux-libre-5.10-source): Apply above patch. (doc-supported?): New procedure. (make-linux-libre) [DOC-SUPPORTED?]: Add new patch in the default patches used. Add a BUILD-DOC? argument. (make-linux-libre*): Add a BUILD-DOC? argument. Validate BUILD-DOC? for supported VERSION. [arguments]: Conditionally add the build-doc and install-doc phases. [native-inputs]: Conditionally add fontconfig, graphviz, python-wrapper, python-sphinx, texinfo and which. Maxim Cournoyer
2022-11-24gnu: emacs-s: Do not use full-fledged Emacs to run tests....* gnu/packages/emacs-xyz.scm (emacs-s)[arguments]: Use emacs-minimal. Ricardo Wurmus
2022-11-24gnu: arm-trusted-firmware: Remove blobs in a snippet....* gnu/packages/firmware.scm (make-arm-trusted-firmware)[source]: Add snippet to remove binary blobs. [arguments]: Remove related phase. Efraim Flashner
2022-11-24gnu: arm-trusted-firmware: Update to 2.8....* gnu/packages/firmware.scm (make-arm-trusted-firmware): Update to 2.8. [arguments]: Remove trailing #t from phases. Clean up regexes. Efraim Flashner
2022-11-24gnu: python-brotlicffi: Unbundle brotli....* gnu/packages/python-compression.scm (python-brotlicffi)[source]: Add snippet to delete bundled libbrotli. [arguments]: Add phase to configure using shared libbrotli. [inputs]: Add brotli. Efraim Flashner
2022-11-24gnu: Add qt-creator....* gnu/packages/qt.scm (qt-creator): New variable. wip Maxim Cournoyer
2022-11-24gnu: qttools: Add clang-15 as input....* gnu/packages/qt.scm (qttools) [inputs]: Add clang-15, so that the qdoc command can be built. [phases] {sanity-check}: New phase, to guard against a problem that proved difficult to isolate. Maxim Cournoyer
2022-11-24gnu: Add clazy....* gnu/packages/qt.scm (clazy): New variable. Maxim Cournoyer
2022-11-24gnu: Add qttranslations....* gnu/packages/qt.scm (qttranslations): New variable. Maxim Cournoyer
2022-11-24gnu: emacs-projectile: Activate tests....* gnu/packages/emacs-xyz.scm (emacs-projectile)[source]: Use Git repository instead of released tarball to get the test file. [arguments]: Activate tests, and fix a failing one. Nicolas Goaziou
2022-11-24gnu: emacs-projectile: Improve description....* gnu/packages/emacs-xyz.scm (emacs-projectile)[description]: Use proper capitalization, expand some words, add Texinfo markup, remove fancy typography. Nicolas Goaziou
2022-11-24gnu: emacs-projectile: Update to 2.7.0....* gnu/packages/emacs-xyz.scm (emacs-projectile): Update to 2.7.0. Nicolas Goaziou
2022-11-24gnu: emacs-kind-icon: Update to 0.1.8....* gnu/packages/emacs-xyz.scm (emacs-kind-icon): Update to 0.1.8. Nicolas Goaziou
2022-11-24gnu: emacs-vertico: Update to 0.29....* gnu/packages/emacs-xyz.scm (emacs-vertico): Update to 0.29. Nicolas Goaziou
2022-11-24gnu: emacs-eldev: Update to 1.3....* gnu/packages/emacs-xyz.scm (emacs-eldev): Update to 1.3. Nicolas Goaziou
2022-11-24gnu: emacs-detached: Update to 0.10.0....* gnu/packages/emacs-xyz.scm (emacs-detached): Update to 0.10.0. Nicolas Goaziou
2022-11-24gnu: emacs-org-modern: Update to 0.6....* gnu/packages/emacs-xyz.scm (emacs-org-modern): Update to 0.6. Nicolas Goaziou
2022-11-24gnu: r-ancombc: Update to 2.0.1....* gnu/packages/bioconductor.scm (r-ancombc): Update to 2.0.1. [propagated-inputs]: Remove r-microbiome, r-nlme, and r-phyloseq; add r-cvxr, r-emmeans, r-lme4, r-lmertest, r-mia, r-rngtools, r-s4vectors, r-singlecellexperiment, r-summarizedexperiment, and r-treesummarizedexperiment. Ricardo Wurmus
2022-11-24gnu: Add r-mia....* gnu/packages/bioconductor.scm (r-mia): New variable. Ricardo Wurmus
2022-11-24gnu: Add r-treesummarizedexperiment....* gnu/packages/bioconductor.scm (r-treesummarizedexperiment): New variable. Ricardo Wurmus
2022-11-24gnu: Add r-cvxr....* gnu/packages/cran.scm (r-cvxr): New variable. Ricardo Wurmus
2022-11-24gnu: Add r-ecosolver....* gnu/packages/cran.scm (r-ecosolver): New variable. Ricardo Wurmus
2022-11-24gnu: Add r-scs....* gnu/packages/cran.scm (r-scs): New variable. Ricardo Wurmus
2022-11-24gnu: Add r-osqp....* gnu/packages/cran.scm (r-osqp): New variable. Ricardo Wurmus
2022-11-24gnu: Add r-ancombc....* gnu/packages/bioconductor.scm (r-ancombc): New variable. Mădălin Ionel Patrașcu
2022-11-24gnu: linux-libre 4.19: Update to 4.19.266....* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.266. (linux-libre-4.19-pristine-source): Update hash. Leo Famulari
2022-11-24gnu: r-aims: Update to 1.30.0....* gnu/packages/bioconductor.scm (r-aims): Update to 1.30.0. Ricardo Wurmus
2022-11-24gnu: Add r-aims....* gnu/packages/bioconductor.scm (r-aims): New variable. Mădălin Ionel Patrașcu
2022-11-24gnu: r-alevinqc: Update to 1.14.0....* gnu/packages/bioconductor.scm (r-alevinqc): Update to 1.14.0. Ricardo Wurmus
2022-11-24gnu: Add r-alevinqc....* gnu/packages/bioconductor.scm (r-alevinqc): New variable. Mădălin Ionel Patrașcu
2022-11-24gnu: r-alphabeta: Update to 1.12.0....* gnu/packages/bioconductor.scm (r-alphabeta): Update to 1.12.0. Ricardo Wurmus
2022-11-24gnu: Add r-alphabeta....* gnu/packages/bioconductor.scm (r-alphabeta): New variable. Mădălin Ionel Patrașcu
2022-11-24gnu: r-asafe: Update to 1.24.0....* gnu/packages/bioconductor.scm (r-asafe): Update to 1.24.0. Ricardo Wurmus
2022-11-24gnu: Add r-asafe....* gnu/packages/bioconductor.scm (r-asafe): New variable. Mădălin Ionel Patrașcu
2022-11-24gnu: r-arrayexpress: Update to 1.57.0....* gnu/packages/bioconductor.scm (r-arrayexpress): Update to 1.57.0. Ricardo Wurmus
2022-11-24gnu: Add r-arrayexpress....* gnu/packages/bioconductor.scm (r-arrayexpress): New variable. Mădălin Ionel Patrașcu
2022-11-24gnu: r-scuttle: Update to 1.8.1....* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.8.1. Ricardo Wurmus
2022-11-24gnu: r-rgreat: Update to 2.0.2....* gnu/packages/bioconductor.scm (r-rgreat): Update to 2.0.2. Ricardo Wurmus
2022-11-24gnu: r-bioccheck: Update to 1.34.2....* gnu/packages/bioconductor.scm (r-bioccheck): Update to 1.34.2. Ricardo Wurmus
2022-11-24gnu: r-dose: Update to 3.24.2....* gnu/packages/bioconductor.scm (r-dose): Update to 3.24.2. Ricardo Wurmus
2022-11-24gnu: r-shortread: Update to 1.56.1....* gnu/packages/bioconductor.scm (r-shortread): Update to 1.56.1. Ricardo Wurmus
2022-11-24gnu: r-chipseeker: Update to 1.34.1....* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.34.1. Ricardo Wurmus
2022-11-24gnu: r-deconvr: Update to 1.4.2....* gnu/packages/bioconductor.scm (r-deconvr): Update to 1.4.2. Ricardo Wurmus
2022-11-24gnu: r-bambu: Update to 3.0.2....* gnu/packages/bioconductor.scm (r-bambu): Update to 3.0.2. Ricardo Wurmus
2022-11-24gnu: r-minimal: Simplify build phase....* gnu/packages/statistics.scm (r-minimal)[arguments]: Simplify phase "remove-extraneous-references". Ricardo Wurmus
2022-11-24gnu: r-minimal: Use %store-directory instead of /gnu/store....* gnu/packages/statistics.scm (r-minimal)[arguments]: Use %store-directory instead of hard-coding "/gnu/store" prefix. Ricardo Wurmus
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