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2016-10-08gnu: r-mgcv: Update to 1.8-15.Ben Woodcroft
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-15.
2016-10-08gnu: ruby-sequel: Update to 4.39.0.Ben Woodcroft
* gnu/packages/ruby.scm (ruby-sequel): Update to 4.39.0.
2016-10-08gnu: yoshimi: Update to 1.4.1.Ricardo Wurmus
* gnu/packages/music.scm (yoshimi): Update to 1.4.1. [arguments]: Add build phase "find-ncurses".
2016-10-08gnu: python2-dendropy: Fix tests.Ben Woodcroft
* gnu/packages/bioinformatics.scm (python2-dendropy)[source]: Use unpatched source. [arguments]: Use nose to run tests. [native-inputs]: Add python2-nose.
2016-10-07gnu: vigra: Workaround rounding error in test suite on 32-bit CPUs.Leo Famulari
* gnu/packages/image.scm (vigra)[arguments]: Pass '-ffloat-store' to C_FLAGS and CXX_FLAGS.
2016-10-08gnu: drumstick: Update to 1.1.0.Ricardo Wurmus
* gnu/packages/music.scm (drumstick): Update to 1.1.0.
2016-10-08doc: Remove GHC from examples for propagation.Ricardo Wurmus
* doc/guix.texi (package Reference): Remove GHC from the list of languages for which library run-time dependencies must be propagated.
2016-10-08gnu: tbb: Update to 2017_20160916.Ricardo Wurmus
* gnu/packages/tbb.scm (tbb): Update to 2017_20160916.
2016-10-07utils: Support defaults in substitute-keyword-arguments.Eric Bavier
* guix/utils.scm (collect-default-args, expand-default-args): New syntax. (substitute-keyword-arguments): Allow default value declarations. * tests/utils.scm (substitute-keyword-arguments): New test.
2016-10-07utils: Fix default-keyword-arguments.Eric Bavier
* guix/utils.scm (default-keyword-arguments): Properly test for present keywords. * tests/utils.scm (default-keyword-arguments): New test.
2016-10-07gnu: ncdu: Update to 1.12.Efraim Flashner
* gnu/packages/ncdu.scm (ncdu): Update to 1.12. [source]: Use https. [license]: Use https. [home-page]: Use https.
2016-10-07gnu: abbaye: Update source URL.Ricardo Wurmus
* gnu/packages/games.scm (abbaye)[source]: Update tarball URL.
2016-10-07gnu: khal: Update to 0.8.4.Leo Famulari
* gnu/packages/calendar.scm (khal): Update to 0.8.4.
2016-10-06gnu: lvm2: Make sure compiled objects are stripped.Leo Famulari
* gnu/packages/linux.scm (lvm2)[arguments]: Add 'make-objects-writeable' phase.
2016-10-06gnu: lvm2: Update to 2.02.166.Leo Famulari
* gnu/packages/linux.scm (lvm2): Update to 2.02.166.
2016-10-06gnu: lvm2: Use 'modify-phases'.Leo Famulari
* gnu/packages/linux.scm (lvm2)[arguments]: Use 'modify-phases'.
2016-10-06guix system: Return two values when failing to talk to shepherd.Ludovic Courtès
Before that, when 'guix system reconfigure' failed to talk to shepherd and a 'system-error' was raised, we would get a "too few values returned to continuation" error, which would prevent GRUB from being installed. Reported by fps on #guix. * guix/scripts/system.scm (warn-on-system-error): Remove. (with-shepherd-error-handling): Inline former 'warn-on-system-error'. Return two values when 'system-error' is raised.
2016-10-06gnu: nginx: Update to 1.11.4.Efraim Flashner
* gnu/packages/web.scm (nginx): Update to 1.11.4. [source] Use https. [home-page]: Use https.
2016-10-06gnu: Add hdf-eos5.Thomas Danckaert
* gnu/packages/maths.scm (hdf-eos5): New variable. * gnu/packages/patches/hdf-eos5-build-shared.patch: New file. * gnu/packages/patches/hdf-eos5-remove-gctp.patch: New file. * gnu/packages/patches/hdf-eos5-fix-szip.patch: New file. * gnu/packages/patches/hdf-eos5-fortrantests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patches. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-10-06nls: Update 'de' translation.Ludovic Courtès
2016-10-06gnu: font-hack: Remove empty doc directory.8p8c
* gnu/packages/fonts.scm (font-hack)[arguments]: Remove superfluous code in #:builder. Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-10-06services: xorg: Add ATI video driver to the default modules.8p8c
* gnu/services/xorg.scm (%default-xorg-modules): Add xf86-video-ati. Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-10-06gnu: ecl: Honour XDG_DATA_DIRS/ecl-bundle-systems.Andy Patterson
* gnu/packages/lisp.scm (ecl)[source]: Add snippet. [native-search-paths]: Add XDG_DATA_DIRS. Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-10-06gnu: sbcl: Honour XDG_DATA_DIRS/sbcl-bundle-systems.Andy Patterson
* gnu/packages/lisp.scm (asdf-substitutions): New variable. (sbcl)[source]: Add snippet. [native-search-paths]: Add XDG_DATA_DIRS. Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-10-06gnu: Add ghc-pandoc-citeproc.Ricardo Wurmus
* gnu/packages/haskell.scm (ghc-pandoc-citeproc): New variable.
2016-10-06gnu: Add ghc-xml-conduit.Ricardo Wurmus
* gnu/packages/haskell.scm (ghc-xml-conduit): New variable.
2016-10-06gnu: Add ghc-xml-types.Ricardo Wurmus
* gnu/packages/haskell.scm (ghc-xml-types): New variable.
2016-10-06gnu: Add ghc-conduit-extra.Ricardo Wurmus
* gnu/packages/haskell.scm (ghc-conduit-extra): New variable.
2016-10-06gnu: Add ghc-rfc5051.Ricardo Wurmus
* gnu/packages/haskell.scm (ghc-rfc5051): New variable.
2016-10-06gnu: Add ghc-hs-bibutils.Ricardo Wurmus
* gnu/packages/haskell.scm (ghc-hs-bibutils): New variable.
2016-10-06gnu: ghc-streaming-commons: Remove standard packages from inputs.Ricardo Wurmus
The "directory" and "transformers" modules are part of GHC and should not be among the inputs to avoid conflicts. * gnu/packages/haskell.scm (ghc-streaming-commons)[inputs]: Remove "ghc-directory" and "ghc-transformers".
2016-10-06gnu: Add r-bsgenome-celegans-ucsc-ce10.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-bsgenome-celegans-ucsc-ce10): New variable.
2016-10-05gnu: nss-certs and nss: Update to 3.27.1.Leo Famulari
* gnu/packages/certs.scm (nss-certs): Update to 3.27.1. * gnu/packages/gnuzilla.scm (nss): Update to 3.27.1.
2016-10-05gnu: e2fsprogs: Fix typo in comment.Leo Famulari
* gnu/packages/linux.scm (e2fsprogs)[arguments]: Fix typo in comment.
2016-10-05gnu: e2fsprogs: Disable parallel build.Leo Famulari
* gnu/packages/linux.scm (e2fsprogs)[arguments]: Add #:parallel-build? #f.
2016-10-05gnu: json-c: Update to 0.12.1.Leo Famulari
* gnu/packages/web.scm (json-c): Update to 0.12.1.
2016-10-05gnu: libxvmc: Fix CVE-2016-7953.Leo Famulari
* gnu/packages/patches/libxvmc-CVE-2016-7953.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (libxvmc)[replacement]: New field. (libxvmc/fixed): New variable.
2016-10-05gnu: libxv: Fix CVE-2016-5407.Leo Famulari
* gnu/packages/patches/libxv-CVE-2016-5407.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (libxv)[replacement]: New field. (libxv/fixed): New variable.
2016-10-05gnu: libxtst: Fix CVE-2016-{7951,7952}.Leo Famulari
* gnu/packages/patches/libxtst-CVE-2016-7951-CVE-2016-7952.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (libxtst)[replacement]: New field. (libxtst/fixed): New variable.
2016-10-05gnu: libxrender: Fix CVE-2016-{7949,7950}.Leo Famulari
* gnu/packages/patches/libxrender-CVE-2016-7949.patch, gnu/packages/patches/libxrender-CVE-2016-7950.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/xorg.scm (libxrender)[replacement]: New field. (libxrender/fixed): New variable.
2016-10-05gnu: libxrandr: Fix CVE-2016-{7947,7948}.Leo Famulari
* gnu/packages/patches/libxrandr-CVE-2016-7947-CVE-2016-7948.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (libxrandr)[replacement]: New field. (libxrandr/fixed): New variable.
2016-10-05gnu: libxi: Fix CVE-2016-{7945,7946}.Leo Famulari
* gnu/packages/patches/libxi-CVE-2016-7945-CVE-2016-7946.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (libxi)[replacement]: New field. (libxi/fixed): New variable.
2016-10-05gnu: libxfixes: Fix CVE-2016-7944.Leo Famulari
* gnu/packages/patches/libxfixes-CVE-2016-7944.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (libxfixes)[replacement]: New field. (libxfixes/fixed): New variable.
2016-10-05gnu: libx11: Fix CVE-2016-{7942,7943}.Leo Famulari
* gnu/packages/patches/libx11-CVE-2016-7942.patch, gnu/packages/patches/libx11-CVE-2016-7943.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/xorg.scm (libx11)[replacement]: New field. (libx11/fixed): New variable.
2016-10-05Update e-mail address for ng0.ng0
* .mailmap: Add new entries for ng0.
2016-10-05gnu: Remove lispf4.ng0
The package in its current state is unusable and documentation with unclear licenses is included. Also, the file 'lispf42.c' (and possible others) is generated C code and thus not "source code" as we define it. * gnu/packages/lisp.scm (lispf4): Delete variable. Signed-off-by: Leo Famulari <leo@famulari.name>
2016-10-05gnu: btrfs-progs: Update to 4.8.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (btrfs-progs): Update to 4.8.
2016-10-05gnu: libass: Update to 0.13.4 [fixes CVE-2016-{7969,7970,7972}.Leo Famulari
* gnu/packages/video.scm (libass): Update to 0.13.4.
2016-10-05gnu: gnucash: Update to 2.6.14.Efraim Flashner
* gnu/packages/gnucash.scm (gnucash): Update to 2.6.14.
2016-10-05gnu: Add sunxi-tools.Danny Milosavljevic
* gnu/packages/admin.scm (sunxi-tools): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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