| Age | Commit message (Expand) | Author |
|---|
| 2016-03-03 | gnu: exim: Update to 4.86.2 [fixes CVE-2016-1531]....* gnu/packages/mail.scm (exim): Update to 4.86.2.
| Leo Famulari |
| 2016-03-03 | gnu: Add byzanz....* gnu/packages/gnome.scm (byzanz): New variable.
| David Thompson |
| 2016-03-03 | doc: Improve Info categories....* doc/guix.texi: Change main category to "System administration". Fix
syntax of subnodes. Add entries for 'guix pull' and 'guix gc'. Add
"Emacs" category.
| Ludovic Courtès |
| 2016-03-03 | build: Use (guix grafts) as needed....This is a followup to 7adf9b8.
* build-aux/check-final-inputs-self-contained.scm: Use (guix grafts).
* build-aux/check-available-binaries.scm: Likewise.
| Ludovic Courtès |
| 2016-03-03 | gnu: youtube-dl: Update to 2016.03.01....* gnu/packages/video.scm (youtube-dl): Update to 2016.03.01.
| Efraim Flashner |
| 2016-03-03 | gnu: mpv: Update to 0.16.0....* gnu/packages/video.scm (mpv): Update to 0.16.0.
| Efraim Flashner |
| 2016-03-03 | gnu: perl: Replace with patched version [fixes CVE-2016-2381]....* gnu/packages/patches/perl-CVE-2016-2381.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/perl.scm (perl)[replacement]: New field.
(perl-fixed): New variable.
* gnu/packages/commencement.scm (perl-boot0)[replacement]: New field.
| Leo Famulari |
| 2016-03-03 | gnu: irssi: Support proxy, socks, bot....* gnu/packages/irc.scm (irssi)[arguments]: Add configure flags to
support proxy, socks and bot.
| Efraim Flashner |
| 2016-03-03 | gnu: irssi: Update to 0.8.18....* gnu/packages/irc.scm (irssi): Update to 0.8.18.
[source]: Update uri.
| Efraim Flashner |
| 2016-03-03 | build: Build (guix import github) only when Guile-JSON is available....Reported by Justus Winter <justus@gnupg.org>.
* Makefile.am (MODULES): Add guix/import/github.scm only when
HAVE_GUILE_JSON.
| Ludovic Courtès |
| 2016-03-03 | po: Drop removed file 'weechat.scm'....Fixes <http://bugs.gnu.org/22888>.
weechat has been merged into 'irc.scm' in e288f007.
* po/packages/POTFILES.in: Drop removed file 'weechat.scm'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Justus Winter |
| 2016-03-03 | system: GRUB menu entry says "beta" instead of "alpha"...* gnu/system.scm (kernel->grub-label): Change "alpha" to "beta'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Petter |
| 2016-03-03 | system: Add rfkill to '%base-packages'....* gnu/system.scm (%base-packages): Add RFKILL.
| Ludovic Courtès |
| 2016-03-03 | gnu: python-pysam: Move cython and setuptools to native inputs....* gnu/packages/bioinformatics.scm (python-pysam)[inputs]: Move
"python-cython" and "python-setuptools" from here...
[native-inputs]: ... to here.
| Ricardo Wurmus |
| 2016-03-03 | gnu: deeptools: Update to 2.1.1....* gnu/packages/bioinformatics.scm (deeptools): Update to 2.1.1.
[inputs]: Add "python2-numpydoc" and "python2-pybigwig".
| Ricardo Wurmus |
| 2016-03-03 | gnu: deeptools: Change "propagated-inputs" to "inputs"....* gnu/packages/bioinformatics.scm (deeptools)[propagated-inputs]: Move
all inputs from here...
[inputs]: ...to here.
| Ricardo Wurmus |
| 2016-03-03 | gnu: Add python-pybigwig....* gnu/packages/bioinformatics.scm (python-pybigwig, python2-pybigwig):
New variables.
| Ricardo Wurmus |
| 2016-03-03 | gnu: python-pysam: Update to 0.8.4....* gnu/packages/bioinformatics.scm (python-pysam): Update to 0.8.4.
| Ricardo Wurmus |
| 2016-03-03 | gnu: python-pysam, python2-pysam: Move to bioinformatics.scm....* gnu/packages/python.scm (python-pysam, python2-pysam): Move to...
* gnu/packages/bioinformatics.scm (python-pysam, python2-pysam):
...here.
| Ricardo Wurmus |
| 2016-03-03 | lint: derivation: Disable grafts, but check replacements....* guix/scripts/lint.scm (check-derivation): Pass #:graft? #f. When
'package-replacement' exists, compute its derivation.
| Ludovic Courtès |
| 2016-03-02 | gnu: Add procmail.... * gnu/packages/patches/procmail-ambiguous-getline-debian.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/mail.scm (procmail): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
| Lukas Gradl |
| 2016-03-03 | guix build: -S returns the replacement's source....Reported by Mark H Weaver.
* guix/scripts/build.scm (options->derivations): When SRC and GRAFT? are
true, use the source of P's replacement.
* tests/guix-build.sh: Add test.
| Ludovic Courtès |
| 2016-03-03 | hydra: Completely disable grafting....* build-aux/hydra/gnu-system.scm (hydra-jobs): Parameterize '%graft?'.
Build package replacements when they are available.
| Ludovic Courtès |
| 2016-03-03 | hydra: Improve readability....* build-aux/hydra/gnu-system.scm (hydra-jobs): Use 'filter-map' instead
of directly 'fold-packages'.
| Ludovic Courtès |
| 2016-03-02 | utils: Use '@' for separating package names and version numbers....This provides the ability to use numbers in package names.
Fixes <http://bugs.gnu.org/19219>.
* guix/utils.scm (package-name->name+version): New procedure.
* gnu/packages.scm (%find-package): Add a FALLBACK? keyword argument.
Use the previous method when no package is found.
(specification->package+output, specification->package): Adapt
documentation to new syntax.
* doc/guix.texi (Invoking guix package, Invoking guix import): Likewise.
* guix/ui.scm (package-specification->name+version+output): Likewise.
* guix/scripts/import/hackage.scm (show-help): Likewise.
* tests/guix-build.sh: Adapt to new syntax.
* tests/guix-lint.sh: Likewise.
* tests/guix-package.sh: Likewise.
* tests/ui.scm ("package-specification->name+version+output"): Likewise.
* tests/utils.scm ("package-name->name+version"): Likewise.
* NEWS: Mention new syntax.
| Mathieu Lirzin |
| 2016-03-02 | packages: Factorize package specification search....* gnu/packages.scm (%find-package): New procedure.
(specification->package, specification->package+output): Use it.
| Mathieu Lirzin |
| 2016-03-02 | gnu: icecat: Update bundled graphite2 to 1.3.6 [unspecified security fixes]....* gnu/packages/patches/icecat-update-graphite2-pt2.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patch.
| Mark H Weaver |
| 2016-03-02 | gnu: nss: Update to 3.21.1....* gnu/packages/gnuzilla.scm (nss): Update to 3.21.1.
| Mark H Weaver |
| 2016-03-02 | gnu: graphite2: Replace with 1.3.6 [unspecified security fixes]....See <https://bodhi.fedoraproject.org/updates/FEDORA-2016-dec1faadc5>
* gnu/packages/fontutils.scm (graphite2)[replacement]: New field.
(graphite2-1.3.6): New variable.
| Mark H Weaver |
| 2016-03-02 | gnu: Add password-store....* gnu/packages/password-utils.scm (password-store): New variable.
Co-authored-by: Andreas Enge <andreas@enge.fr>
Co-authored-by: Leo Famulari <leo@famulari.name>
| Jessica Tallon |
| 2016-03-02 | gnu: Add cppcheck....* gnu/packages/check.scm (cppcheck): New variable.
| Roel Janssen |
| 2016-03-02 | tests: Disable grafts by default....Fixes <http://bugs.gnu.org/22872>.
Reported by myglc2 <myglc2@gmail.com>.
* test-env.in: Define and export 'GUIX_BUILD_OPTIONS'.
* tests/guix-build.sh: When setting 'GUIX_BUILD_OPTIONS', make sure it
contains '--no-grafts'.
* tests/guix-package.sh: Likewise.
* tests/guix-daemon.sh: Add (%graft? #f) in Scheme snippets.
| Ludovic Courtès |
| 2016-03-02 | graph: Ignore 'GUIX_BUILD_OPTIONS'....Previously 'GUIX_BUILD_OPTIONS' would be honored, but 'guix graph' does
not support the common build options.
* guix/scripts/graph.scm (guix-graph): Use 'args-fold*' instead of
'parse-command-line'.
| Ludovic Courtès |
| 2016-03-02 | guix build: Move '--no-grafts' to the common build options....* guix/scripts/build.scm (%options): Move --no-grafts to...
(%standard-build-options): ... here.
(show-help, show-build-options-help): Adjust accordingly.
* guix/scripts/archive.scm (%default-options): Add 'graft?'.
(guix-archive): Parametrize '%graft?'.
* guix/scripts/environment.scm (%default-options): Add 'graft?'.
(guix-environment): Parametrize '%graft?'.
* guix/scripts/package.scm (%default-options): Add 'graft?'.
(guix-package): Parametrize '%graft?'.
* guix/scripts/system.scm (%default-options): Add 'graft?'.
(guix-system): Parametrize 'graft?'.
* doc/guix.texi (Additional Build Options): Move --no-grafts to...
(Common Build Options): ... here.
| Ludovic Courtès |
| 2016-03-02 | guix archive: Use 'with-store'....* guix/scripts/archive.scm (guix-archive): Use 'with-store' instead of
an explicit 'open-connection'.
| Ludovic Courtès |
| 2016-03-02 | gnu: openssl: Enable ssl2 at build time to ensure ABI compatible graft....Fixes <https://debbugs.gnu.org/22876>
Reported by Christopher Allan Webber <cwebber@dustycloud.org>.
* gnu/packages/tls.scm (openssl-1.0.2g)[arguments]: Override the inherited
'configure' phase to add "enable-ssl2" as an argument to ./config.
| Mark H Weaver |
| 2016-03-01 | gnu: ilmbase: Fix typo in adding a patch....* gnu-system.am (dist_patch_DATA): Fix typo.
5e8276dcf4e3a05f69176dca816f00616e7f0593
| Leo Famulari |
| 2016-03-02 | gnu: xfce: Don't wrap 'startxfce4'....The necessary environment variables are set by 'etc/profile' now.
* gnu/packages/xfce.scm (xfce)[build-system]: Use 'trivial-build-system'.
[arguments]: Simplify.
| 宋文武 |
| 2016-03-01 | gnu: ilmbase: Add patch to fix build on i686....Fixes <http://bugs.gnu.org/22049>.
* gnu/packages/patches/ilmbase-fix-tests.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/graphics.scm (ilmbase)[source]: Add patch.
| Leo Famulari |
| 2016-03-01 | gnu: openssh: Update to 7.2p1....* gnu/packages/ssh.scm (openssh): Update to 7.2p1.
| Leo Famulari |
| 2016-03-01 | gnu: libressl: Update to 2.2.6....* gnu/packages/tls.scm (libressl): Update to 2.2.6.
| Leo Famulari |
| 2016-03-01 | gnu: parallel: Update to 20160222....* gnu/packages/parallel.scm (parallel): Update to 20160222.
| Leo Famulari |
| 2016-03-01 | gnu: r-go-db: Bioconductor changed URL for data downloads....* gnu/packages/bioinformatics.scm (r-go-db)[source]: Update data URL.
| Pjotr Prins |
| 2016-03-01 | gnu: r-iranges: Update to 2.4.8....* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.4.8.
| Pjotr Prins |
| 2016-03-01 | gnu: r-s4vectors: Update to 0.8.11....* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.8.11.
| Pjotr Prins |
| 2016-03-01 | gnu: r-ggplot2: Update to 2.0.0....* gnu/packages/statistics.scm (r-ggplot2): Update to 2.0.0.
| Pjotr Prins |
| 2016-03-01 | gnu: openssl: Replace with 1.0.2g [fixes CVE-2016-{0800,0705,0798,0797,0799,0......See <http://openssl.org/news/secadv/20160301.txt>.
Also fixes <http://bugs.gnu.org/22831>.
* gnu/packages/patches/openssl-c-rehash-in.patch: New file.
* gnu/packages/tls.scm (openssl)[replacement]: New field.
(openssl-1.0.2g): New variable.
| Ludovic Courtès |
| 2016-03-01 | grafts: Graft recursively....Fixes <http://bugs.gnu.org/22139>.
* guix/grafts.scm (graft-derivation): Rename to...
(graft-derivation/shallow): ... this.
(graft-origin-file-name, item->deriver, non-self-references)
(cumulative-grafts, graft-derivation): New procedures
* tests/grafts.scm ("graft-derivation, grafted item is a direct
dependency"): Clarify title. Use 'grafted' instead of 'graft' to refer
to the grafted derivation.
("graft-derivation, grafted item is an indirect dependency")
("graft-derivation, no dependencies on grafted output"): New tests.
* guix/packages.scm (input-graft): Change to take a package instead of
an input.
(input-cross-graft): Likewise.
(fold-bag-dependencies): New procedure.
(bag-grafts): Rewrite in terms of 'fold-bag-dependencies'.
* tests/packages.scm ("package-derivation, indirect grafts"): Comment out.
* doc/guix.texi (Security Updates): Mention run-time dependencies and
recursive grafting.
| Ludovic Courtès |
| 2016-03-01 | gnu: tiled: Use 'modify-phases'....* gnu/packages/game-development.scm (tiled)[arguments]: Use 'modify-phases'.
| Efraim Flashner |
| 2016-03-01 | gnu: tiled: Update to 0.15.1....* gnu/packages/game-development.scm (tiled): Update to 0.15.1.
| Efraim Flashner |
