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2019-07-02import: pypi: Include optional test inputs as native-inputs.Maxim Cournoyer
* guix/import/pypi.scm (maybe-inputs): Add INPUT-TYPE argument, and use it. (test-section?): New predicate. (parse-requires.txt): Collect the optional test inputs, and return them as the second element of the returned list. (parse-wheel-metadata): Likewise. (guess-requirements): Adapt. (make-pypi-sexp): Likewise, and include the test inputs requirements as native inputs in the returned package expression. * tests/pypi.scm (test-requires.txt): Include a test section in the test-requires.txt data. (test-requires.txt-beaker): New variable. ("parse-requires.txt"): Adapt. ("parse-requires.txt - Beaker"): New test. ("parse-wheel-metadata, with extras"): Adapt. ("parse-wheel-metadata, with extras - Jedi"): Adapt. ("pypi->guix-package, no wheel"): Re-indent, and add the expected native-inputs. ("pypi->guix-package, wheels"): Likewise.
2019-07-02import: pypi: Completely mute the output of the "unzip" command.Maxim Cournoyer
* guix/import/pypi.scm (guess-requirements): Completely mute the output of the "unzip" command.
2019-07-02import: pypi: Fix typo in docstring.Maxim Cournoyer
* guix/import/pypi.scm (guess-requirements): Fix typo.
2019-07-02import: pypi: Parse wheel METADATA instead of metadata.json.Maxim Cournoyer
With newer Wheel releases, there is no more metadata.json file; the METADATA file should be used instead (see: https://github.com/pypa/wheel/issues/195). This change updates our PyPI importer so that it uses the latter. * guix/import/pypi.scm (define-module): Remove unnecessary modules and export the PARSE-WHEEL-METADATA procedure. (parse-wheel-metadata): Add procedure. (guess-requirements): Use it. * tests/pypi.scm (test-metadata): Test it.
2019-07-02import: pypi: Support more types of archives.Maxim Cournoyer
This change enables the PyPI importer to look for requirements in a source archive of a different type than "tar.gz" or "tar.bz2". Also, scan the source archive to find a requires.txt file. * guix/import/pypi.scm: (guess-requirements)[tarball-directory]: Remove procedure. [guess-requirements-from-source]: Use COMRESSED-FILE? to determine if an archive type is supported, and some file extension logic that chooses either "tar" or "unzip" as the extractor. Search for the requires.txt file in the archive instead of using a static, expected location. (guess-requirements): Rename the TARBALL argument to ARCHIVE, to denote the archive format is no longer bound specifically to the Tar format. (compute-inputs): Likewise. * tests/pypi.scm ("pypi->guix-package, no wheel"): Mock the requires.txt at a non-standard location. ("pypi->guix-package, no usable requirement file."): New test.
2019-07-02import: pypi: Deduplicate requirements.Maxim Cournoyer
* guix/import/pypi.scm (parse-requires.txt): Remove potential duplicates.
2019-07-02import: pypi: Improve parsing of requirement specifications.Maxim Cournoyer
The previous solution was fragile and could leave unwanted characters in a requirement name, such as '[' or ']'. Partially fixes <https://bugs.gnu.org/33047>. * guix/import/pypi.scm (use-modules): Export SPECIFICATION->REQUIREMENT-NAME (%requirement-name-regexp): New variable. (clean-requirement): Rename to... (specification->requirement-name): this, which now uses %requirement-name-regexp to select the requirement name from the requirement specification. (parse-requires.txt): Adapt.
2019-07-02import: pypi: Do not parse optional requirements from source.Maxim Cournoyer
* guix/import/pypi.scm: Export PARSE-REQUIRES.TXT. (clean-requirement): Move procedure to the top level. (guess-requirements): Move the READ-REQUIREMENTS procedure to the top level, and rename it to PARSE-REQUIRES.TXT. Move the CLEAN-REQUIREMENT procedure to the top level. Move the COMMENT? functions inside the PARSE-REQUIRES.TXT procedure. (parse-requires.txt): Add a SECTION-HEADER? predicate, and use it to prevent parsing optional requirements. * tests/pypi.scm (test-requires-with-sections): New variable. ("parse-requires.txt, with sections"): New test.
2019-07-02tests: pypi: Mute the output of tar.Maxim Cournoyer
The output of tar when creating archives for the purpose of tests is not useful, so we mute it. * tests/pypi.scm ("pypi->guix-package"): Mute the output of tar. ("pypi->guix-package, wheels"): Likewise.
2019-07-02import: pypi: Do not consider requirements.txt files.Maxim Cournoyer
PyPI packages are mandated to have a setup.py file, which contains a listing of the required dependencies. The setuptools/distutils machinery embed metadata in the archives they produce, which contains this information. There is no need nor gain to collect the requirements from a "requirements.txt" file, as it is not the true record of dependencies for PyPI packages and may contain extraneous requirements or not exist at all. * guix/import/pypi.scm (guess-requirements): Update comment. [guess-requirements-from-source]: Do not attempt to parse the file requirements.txt. Streamline logic. * tests/pypi.scm (test-requires.txt): Rename from test-requirements, to hint at the file being tested. ("pypi->guix-package"): Adapt so that the fake package contains a requires.txt file rather than a requirements.txt file. ("pypi->guix-package, wheels"): Likewise.
2019-07-02gnu: silkaj: Update to 0.7.2.Nicolas Goaziou
* gnu/packages/finance.scm (silkaj): Update to 0.7.2.
2019-07-02gnu: giac: Update to 1.5.0-61.Nicolas Goaziou
* gnu/packages/algebra.scm (giac): Update to 1.5.0-61.
2019-07-02gnu: python-duniterpy: Update to 0.54.3.Nicolas Goaziou
* gnu/packages/finance.scm (python-duniterpy): Update to 0.54.3.
2019-07-01etc: Do not recommend use of SKS key servers.Ricardo Wurmus
* etc/guix-install.sh: Recommend downloading the GPG key from Savannah.
2019-07-01gnu: guile: Add 2.2.6.Ludovic Courtès
* gnu/packages/guile.scm (guile-2.2.5): Rename to... (guile-2.2.6): ... this, and update to 2.2.6.
2019-07-01gnu: behave: Fix build.Danny Milosavljevic
* gnu/packages/check.scm (behave)[propagated-inputs]: Add python-importlib-metadata.
2019-06-30gnu: gtksourceviewmm: Build against gtksourceview@3.Marius Bakke
* gnu/packages/gtk.scm (gtksourceviewmm)[propagated-inputs]: Change GTKSOURCEVIEW to GTKSOURCEVIEW-3.
2019-06-30guix: import: crate: fix redundant inputs list nestingIvan Petkov
* guix/import/crate.scm (maybe-cargo-inputs): Remove one level of lists. * guix/import/crate.scm (maybe-cargo-development-inputs): Same. * tests/crate.scm: (crate->guix-package)[package]<#:arguments>: Remove one level of list nesting.
2019-06-30gnu: miniupnpc: Update to 2.1.20190625.Marius Bakke
* gnu/packages/upnp.scm (miniupnpc): Update to 2.1.20190625.
2019-06-30gnu: mbedtls-apache: Update to 2.16.2.Marius Bakke
* gnu/packages/tls.scm (mbedtls-apache): Update to 2.16.2.
2019-06-30gnu: ungoogled-chromium: Build against ICU 64.Marius Bakke
* gnu/packages/icu4c.scm (icu4c-64): New public variable. * gnu/packages/chromium.scm (ungoogled-chromium)[inputs]: Change ICU4C to ICU4C-64.
2019-06-29gnu: nginx: Update to 1.17.1.Marius Bakke
* gnu/packages/web.scm (nginx): Update to 1.17.1.
2019-06-29gnu: gstreamer: Fix buffer offset problem.Marius Bakke
* gnu/packages/patches/gstreamer-buffer-reset-offset.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gstreamer.scm (gstreamer)[source](patches): New field. [arguments]: Do not disable any tests.
2019-06-29gnu: stow: Update license information.Efraim Flashner
* gnu/packages/package-management.scm (stow)[license]: Update to gpl3+.
2019-06-29download: Remove hydra from content-addressed URL listTobias Geerinckx-Rice
* guix/build/download-nar.scm (urls-for-item): Remove mirror.hydra.gnu.org. * guix/download.scm (%content-addressed-mirrors): Likewise.
2019-06-29etc: Remove hydra.gnu.org.pub key.Tobias Geerinckx-Rice
* etc/substitutes/hydra.gnu.org.pub: Delete file. * guix/self.scm (miscellaneous-files): Don't install it. * Makefile.am (dist_pkgdata_DATA): Remove it. * gnu/services/base.scm (%default-authorized-guix-keys): Likewise. (hydra-key-authorization): Rename to… (substitute-key-authorization): …this. Adjust only call site.
2019-06-29doc: Correct the software behind ci.guix.gnu.org.Tobias Geerinckx-Rice
* doc/guix.texi (Invoking guix publish): It runs Cuirass.
2019-06-29doc: Remove references to hydra.gnu.org.Tobias Geerinckx-Rice
* doc/contributing.texi (Packaging Guidelines, Submitting Patches): Replace hydra URL with @value{SUBSTITUTE-SERVER}. * doc/guix.texi (Official Substitute Server): Remove ‘hydra’ @cindex. (Substitute Server Authorization): Remove note about hydra.gnu.org.pub.
2019-06-29guix-install.sh: Don't authorise hydra.gnu.org.Tobias Geerinckx-Rice
* etc/guix-install.sh (sys_authorize_build_farms): Authorise only ci.guix.gnu.org and make all references to it singular.
2019-06-29gnu: flashrom: Update to 1.1.Tobias Geerinckx-Rice
* gnu/packages/flashing-tools.scm (flashrom): Update to 1.1.
2019-06-29gnu: di: Update to 4.47.1.Tobias Geerinckx-Rice
* gnu/packages/admin.scm (di): Update to 4.47.1.
2019-06-28gnu: stow: Update to 2.3.0.Eric Bavier
* gnu/packages/package-management.scm (stow): Update to 2.3.0. [propagated-inputs]: New field.
2019-06-28gnu: Add Perl Clone::Choose.Eric Bavier
* gnu/packages/perl.scm (perl-clone-choose): New variable.
2019-06-28gnu: rust: use llvm@8Ivan Petkov
* gnu/packages/llvm.scm (llvm): Rename to... (llvm-8): ...this. (llvm): New variable. * gnu/packages/rust.scm (rust)[inputs]: Use llvm-8
2019-06-28gnu: rust: downgrade older versions to llvm@6Ivan Petkov
* gnu/packages/rust.scm: (rust-1.30): Remove llvm override.
2019-06-28gnu: rust: remove debug-info patch thanks to newer gdb versionIvan Petkov
* gnu/local.mk: (dist_patch_DATA): Delete %D%/packages/patches/rust-1.30-gdb-llvm.patch * gnu/packages/rust.scm: (rust-1.30): Delete patch overrides. (rust-1.31): Delete patch overrides.
2019-06-29gnu: r-quantreg: Update to 5.41.Ricardo Wurmus
* gnu/packages/statistics.scm (r-quantreg): Update to 5.41.
2019-06-29gnu: r-fpc: Update to 2.2-3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-fpc): Update to 2.2-3. [propagated-inputs]: Remove r-mvtnorm.
2019-06-29gnu: r-mclust: Update to 5.4.4.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mclust): Update to 5.4.4.
2019-06-29gnu: r-mvtnorm: Update to 1.0-11.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.0-11.
2019-06-29gnu: r-segmented: Update to 1.0-0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-segmented): Update to 1.0-0.
2019-06-29gnu: r-plotrix: Update to 3.7-6.Ricardo Wurmus
* gnu/packages/statistics.scm (r-plotrix): Update to 3.7-6.
2019-06-29gnu: r-dbplyr: Update to 1.4.2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dbplyr): Update to 1.4.2.
2019-06-29gnu: r-rlang: Update to 0.4.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rlang): Update to 0.4.0.
2019-06-29gnu: r-gdtools: Update to 0.1.9.Ricardo Wurmus
* gnu/packages/statistics.scm (r-gdtools): Update to 0.1.9.
2019-06-29gnu: r-cluster: Update to 2.1.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-cluster): Update to 2.1.0.
2019-06-29gnu: r-future-apply: Update to 1.3.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-future-apply): Update to 1.3.0.
2019-06-29gnu: r-bootstrap: Update to 2019.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-bootstrap): Update to 2019.6.
2019-06-29gnu: r-rnifti: Update to 0.11.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-rnifti): Update to 0.11.0.
2019-06-29gnu: r-rgl: Update to 0.100.24.Ricardo Wurmus
* gnu/packages/cran.scm (r-rgl): Update to 0.100.24.
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