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2024-03-07gnu: emacs-ox-tufte: Simplify test invocation....* gnu/packages/emacs-xyz.scm (emacs-ox-tufte): Simplify the test invocation using the --use-emacsloadpath option in emacs-eldev@1.9. Change-Id: Ie61a336251b2670872cc8d049cc1c62284b7f350 Signed-off-by: Andrew Tropin <andrew@trop.in> Suhail Singh
2024-03-07gnu: emacs-eldev: Update to 1.9....* gnu/packages/emacs-xyz.scm (emacs-eldev): Update to 1.9. Change-Id: I364f261a5d332793d7dd0b789e32a993fa749bd4 Signed-off-by: Andrew Tropin <andrew@trop.in> Suhail Singh
2024-03-06gnu: go-github-com-hashicorp-hcl-v2: Move to golang-xyz....* gnu/packages/golang.scm (go-github-com-hashicorp-hcl-v2): Move from here ... * gnu/packages/golang-xyz.scm: ... to here. Change-Id: Ife07c1ca7b0ba7241955767ebd2430a8e60aec90 Sharlatan Hellseher
2024-03-06gnu: go-github-com-hashicorp-hcl: Move to golang-xyz....* gnu/packages/golang.scm (go-github-com-hashicorp-hcl): Move from here ... * gnu/packages/golang-xyz.scm: ... to here. Change-Id: I431689059384d203cdb1c2d40f16ef9c5958b5ab Sharlatan Hellseher
2024-03-06gnu: go-github-com-hashicorp-go-version: Fix indentation....* gnu/packages/golang-xyz.scm (go-github-com-hashicorp-go-version): Fix indentation. Change-Id: Ib6f81057c9434097209875b91806703695c5089c Sharlatan Hellseher
2024-03-06gnu: go-github-com-hashicorp-go-version: Update to 1.6.0....* gnu/packages/golang-xyz.scm (go-github-com-hashicorp-go-version): Update to 1.6.0. Change-Id: I964c450d42a436bf093222c90abadcaf84b2968d Sharlatan Hellseher
2024-03-06gnu: go-github-com-hashicorp-go-version: Move to golang-xyz....* gnu/packages/golang.scm (go-github-com-hashicorp-go-version): Move from here ... * gnu/packages/golang-xyz.scm: ... to here. Change-Id: Ica0c069e90ade97efbbb201f36d92ff70bad1c8b Sharlatan Hellseher
2024-03-06gnu: go-github-com-spf13-viper: Remove input labels....* gnu/package/golang.scm (go-github-com-spf13-viper) [propagated-inputs]: Remove input labels. Change-Id: I0c8c616b9b44a2fd21f83dbfb609fe1bd861d657 Sharlatan Hellseher
2024-03-06gnu: go-github-com-hashicorp-go-uuid: Move to golang-xyz....* gnu/packages/golang.scm (go-github-com-hashicorp-go-uuid): Move from here ... * gnu/packages/golang-xyz.scm: ... to here. Change-Id: Ib97abb60b716c971bb54144d7d1ea015211e1ed4 Sharlatan Hellseher
2024-03-06gnu: go-github-com-hashicorp-go-syslog: Move to golang-xyz....* gnu/packages/golang.scm (go-github-com-hashicorp-go-syslog): Move from here ... * gnu/packages/golang-xyz.scm: ... to here. Change-Id: Iae1acbde5fcccb7879944dbcbda8a32672478f6a Sharlatan Hellseher
2024-03-06gnu: Add go-github-com-hashicorp-go-multierror....* gnu/packages/golang-xyz.scm (go-github-com-hashicorp-go-multierror): New variable. Change-Id: I6b09a52dc314c4cc6903690738debf4b6c99393f Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Artyom V. Poptsov
2024-03-06gnu: Add go-github-com-hashicorp-errwrap....* gnu/packages/golang-xyz.scm (go-github-com-hashicorp-errwrap): New variable. Change-Id: I4a0e7c23f9aaab4e29c81a68d976dafcd86dd2d1 Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Artyom V. Poptsov
2024-03-06gnu: Add go-github-com-cskr-pubsub....* gnu/packages/golang-xyz.scm (go-github-com-cskr-pubsub): New variable. Change-Id: Ia0a3d5b86cdaad45b6b58af9441b1ea3396ec056 Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Artyom V. Poptsov
2024-03-06gnu: go-go-uber-org-zap: Move to golang-xyz....* gnu/packages/golang.scm (go-go-uber-org-zap): Move from here ... * gnu/packages/golang-xyz.scm: ... to here. * gnu/packages/radio.scm: Add (gnu packages golang-xyz) module. Change-Id: Id4de6cb4714b9b28e43e5aecabf5b32684f1a370 Sharlatan Hellseher
2024-03-06gnu: kubo: Update to 0.22.0....* gnu/packages/ipfs.scm (kubo): Update to 0.22.0. Change-Id: Iee640c01024a399bdf2b9c6e07ef6951e5567f54 Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Artyom V. Poptsov
2024-03-06gnu: go-go-uber-org-zap: Update to 1.24.0....* gnu/packages/golang.scm (go-go-uber-org-zap): Update to 1.24.0. Change-Id: I3028c065ac71ca3accd2789f491829e466068cc2 Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Artyom V. Poptsov
2024-03-06gnu: go-github-com-spf13-afero: Add missing input....* gnu/packages/golang.scm (go-github-com-spf13-afero): Add missing input. [propagated-inputs]: Add go-github-com-pkg-sftp. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Change-Id: If428fdf82c191ce3e408053886c5ec726e9644df Troy Figiel
2024-03-06gnu: Add go-github-com-pkg-sftp....* gnu/packages/golang-web.scm (go-github-com-pkg-sftp): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Troy Figiel
2024-03-06gnu: sqls: Add missing inputs....* gnu/packages/databases (sqls): Add missing inputs. [native-inputs]: Add go-github-com-google-go-cmp-cmp and go-github-com-k0kubun-pp. * gnu/packages/databases: Add (gnu packages golang-xyz) module. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Troy Figiel
2024-03-06gnu: Add go-github-com-k0kubun-pp....* gnu/packages/golang-xyz.scm (go-github-com-k0kubun-pp): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Troy Figiel
2024-03-06gnu: Add go-github-com-ugorji-go-codec....* gnu/packages/golang-web.scm (go-github-com-ugorji-go-codec): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Troy Figiel
2024-03-06gnu: Add go-github-com-nwaples-rardecode-v2....* gnu/packages/golang-compression.scm (go-github-com-nwaples-rardecode-v2): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Troy Figiel
2024-03-06gnu: go-github.com-ulikunitz-xz: Adjust name....* gnu/packages/golang-compression.scm (go-github.com-ulikunitz-xz): Rename variable to go-github-com-ulikunitz-xz to follow golang naming style. * gnu/packages/admin.scm (fiano) [inputs]: Remove go-github.com-ulikunitz-xz. Add go-github-com-ulikunitz-xz. * gnu/packages/bioinformatics.scm (go-github-com-biogo-hts-cram) [propagated-inputs]: Remove go-github.com-ulikunitz-xz. Add go-github-com-ulikunitz-xz. Change-Id: Id2f2556666c4f9a08e0203f5ca7eb8352c492051 Sharlatan Hellseher
2024-03-06gnu: Add go-github-com-hhrutter-tiff....* gnu/packages/golang-xyz.scm (go-github-com-hhrutter-tiff): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Troy Figiel
2024-03-06gnu: Add go-github-com-hhrutter-lzw....* gnu/packages/golang-compression.scm (go-github-com-hhrutter-lzw): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Troy Figiel
2024-03-06gnu: Add go-github-com-dave-jennifer....* gnu/packages/golang-xyz.scm (go-github-com-dave-jennifer): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Troy Figiel
2024-03-06gnu: go-github-com-vividcortex-ewma: Move to golang-xyz....* gnu/packages/golang.scm (go-github-com-vividcortex-ewma): Move from here ... * gnu/packages/golang-xyz.scm: ... to here. Change-Id: Iabf8a6ee15240c0817d80584a34e80dcbce1c974 Sharlatan Hellseher
2024-03-06gnu: go-github-com-cheggaaa-pb-v3: Move to golang-xyz....* gnu/packages/golang.scm (go-github-com-cheggaaa-pb-v3): Move from here ... * gnu/packages/golang-xyz.scm: ... to here. * gnu/packages/golang.scm (go-github-com-cheggaaa-pb): Remove variable. Change-Id: Ieddfddfec841e5b35c14002dbfe8655a7b5dec0f Sharlatan Hellseher
2024-03-06gnu: go-github-com-vividcortex-ewma: Update description....* gnu/packages/golang.scm (go-github-com-vividcortex-ewma) [description]: Provide link to a wiki page sourced from the project's README. Change-Id: I0520b0502f676b8891ddd746774acd483358b95e Sharlatan Hellseher
2024-03-06gnu: go-github-com-cheggaaa-pb-v3: Remove unnecessary inputs....* gnu/packages/golang.scm (go-github-com-cheggaaa-pb-v3): Remove unnecessary inputs. [propagated-inputs]: Remove go-golang-org-x-sys and go-github-com-rivo-uniseg. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Troy Figiel
2024-03-06gnu: go-github-com-cheggaaa-pb-v3: Enable tests....* gnu/packages/golang.scm (go-github-com-cheggaaa-pb-v3): Enable tests. [arguments] <#:tests?>: Set to true. <#:unpack-path>: Set unpack-path to the repository root. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Change-Id: Ic8b64dcf4717ff6a163d8a674e5e7c2c6d162b98 Troy Figiel
2024-03-06gnu: go-github-com-vividcortex-ewma: Fix import-path....* gnu/packages/golang.scm (go-github-com-vividcortex-ewma): Fix import-path. [arguments]<#:import-path>: Use proper capitalization. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Troy Figiel
2024-03-06gnu: Add go-github-com-shirou-gopsutil-v3....* gnu/packages/golang-xyz.scm (go-github-com-shirou-gopsutil-v3): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Change-Id: Ibbfe76f0a56daf76fc4a4ecd844b445e9355a7ce Troy Figiel
2024-03-06gnu: go-github-com-shirou-gopsutil: Reformat with guix style....* gnu/packages/golang-xyz.scm (go-github-com-shirou-gopsutil): Reformat with guix style. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Troy Figiel
2024-03-06gnu: go-github-com-shirou-gopsutil: Update to 2.21.11....* gnu/packages/golang-xyz.scm (go-github-com-shirou-gopsutil): Update to 2.21.11. [arguments]: Fix tests. <#:go>: Update to go-1.18. <#:phases>: Add 'remove-v3 and 'remove-failing-tests phases. [propagated-inputs]: Add go-golang-org-x-sys. [native-inputs]: Add go-github-com-stretchr-testify and procps. * gnu/packages/golang-xyz.scm: Add (gnu packages linux) module. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Troy Figiel
2024-03-06gnu: go-github-com-shirou-gopsutil: Move to golang-xyz....* gnu/packages/golang.scm (go-github-com-shirou-gopsutil): Move from here ... * gnu/packages/golang-xyz.scm: ... to here. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Troy Figiel
2024-03-06gnu: Add go-numcpus....* gnu/packages/golang-xyz.scm (go-numcpus): New variable. Change-Id: I2edb2f355fd14f2f9a470c91519e7fe1581cc243 Sharlatan Hellseher
2024-03-06gnu: Add go-github-com-tklauser-go-sysconf....* gnu/packages/golang-xyz.scm (go-github-com-tklauser-go-sysconf): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Troy Figiel
2024-03-06gnu: Add go-github-com-tklauser-numcpus....* gnu/packages/golang-xyz.scm (go-github-com-tklauser-numcpus): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com> Troy Figiel
2024-03-07gnu: emacs-ess: Disable two bad tests....These tests used to be disabled before and they do still fail. * gnu/packages/statistics.scm (emacs-ess)[arguments]: Disable two more tests. Change-Id: I44a18b43d4fa6af2c9244bb8f3697a01c6c8d255 Ricardo Wurmus
2024-03-06gnu: r-with-tests: Update to 4.3.3....* gnu/packages/statistics.scm (r-with-tests): Update to 4.3.3. Change-Id: Ida43d1e7f747245b01aa6fc73716b79611f0bbfd Ricardo Wurmus
2024-03-06gnu: libtheora: Fix cross-compiling to riscv64-linux....* gnu/packages/xiph.scm (libtheora): [native-inputs]: When cross compiling to riscv64-linux-gnu, add config. [arguments]: When target riscv64-linux-gnu, add update-config phase. Change-Id: Ie055cd4f6cb9d2a4601b93d1f9db227598349c7c Signed-off-by: Ludovic Courtès <ludo@gnu.org> Zheng Junjie
2024-03-06gnu: libtheora: Use Gexps....* gnu/packages/xiph.scm (libtheora): Use Gexps. Change-Id: Ie055cd4f6cb9d2a4601b93d1f9db227598349c7c Signed-off-by: Ludovic Courtès <ludo@gnu.org> Zheng Junjie
2024-03-06gnu: home: dotfiles: Properly support both plain and Stow directory layouts....Fixes <https://issues.guix.gnu.org/68848>. The current implementation of the home-dotfiles-service-type contradicts the Guix manual. This patch properly implements both the plain and Stow dotfiles directory layouts. It does so by refactoring home-dotfiles-configuration adding a new packages field to support GNU Stow's users workflow and introducing a new layout field to switch between the two directory layouts. * gnu/home/services/dotfiles (home-dotfiles-configuration): Migrate to (gnu services configuration); [packages]: new field; [layout]: new field; (strip-stow-dotfile): new variable; (strip-plain-dotfile): new variable; (home-dotfiles-configuration->files): use the new fields; [directory-contents]: allow for selecting a subset of application dotfile directories; * doc/guix.texi: document the new layouts. Change-Id: I2e96037608353e360828290f055ec5271cfdfd48 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Giacomo Leidi
2024-03-06services: virtual-build-machine: Disable substitutes by default....These are useless when offloading yet were causing problems on systems where the default substitute servers are unreachable. * gnu/services/virtualization.scm (%virtual-build-machine-operating-system): Add ‘use-substitutes?’ field to ‘guix-configuration’. Change-Id: I7d5e380a6f2e2d537de43fdb3c550958ed4db255 Ludovic Courtès
2024-03-06doc: Fix typo in “Getting Started with the System”....* doc/guix.texi (Getting Started with the System): Fix typo. Change-Id: Idc52b9a4d5f5003899613595b6b275e098f6a3a8 Ludovic Courtès
2024-03-06gnu: r-seuratdata: Update to 0.2.2.9001-1.4dc08e0....* gnu/packages/cran.scm (r-seuratdata): Update to 0.2.2.9001-1.4dc08e0. [propagated-inputs]: Add r-seurat and r-seuratobject. Change-Id: I8bf21d23ec0bdfbc0b8930673ac5750d081ac780 Ricardo Wurmus
2024-03-06gnu: r-snprelate: Update to 1.36.1....* gnu/packages/bioconductor.scm (r-snprelate): Update to 1.36.1. Change-Id: I5cf14d463c0f4ca3707a8ac33c7a06baa4337789 Ricardo Wurmus
2024-03-06gnu: r-s4arrays: Update to 1.2.1....* gnu/packages/bioconductor.scm (r-s4arrays): Update to 1.2.1. Change-Id: I68c0ee03264073e8816fc92fbaa97ebb6c5036ed Ricardo Wurmus
2024-03-06gnu: r-ggcyto: Update to 1.30.2....* gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.30.2. Change-Id: I29c123aa60347b491412631f036923c3bbb7d6c9 Ricardo Wurmus