| Age | Commit message (Expand) | Author |
|---|
| 2021-06-08 | gnu: Add rust-derive-builder-0.10....* gnu/packages/crates-io.scm (rust-derive-builder-0.10): New variable.
(rust-derive-builder-0.9): Inherit from above.
| Nicolas Goaziou |
| 2021-06-08 | gnu: Add rust-derive-builder-macro-0.10....* gnu/packages/crates-io.scm (rust-derive-builder-macro-0.10): New variable.
| Nicolas Goaziou |
| 2021-06-08 | gnu: Add rust-derive-builder-core-0.10....* gnu/packages/crates-io.scm (rust-derive-builder-core-0.10): New variable.
(rust-derive-builder-core-0.9): Inherit from above.
| Nicolas Goaziou |
| 2021-06-08 | gnu: Add rust-darling-0.12....* gnu/packages/crates-io.scm (rust-darling-0.12): New variable.
(rust-darling-0.10): Inherit from above.
| Nicolas Goaziou |
| 2021-06-08 | gnu: Add rust-darling-macro-0.12....* gnu/packages/crates-io.scm (rust-darling-macro-0.12): New variable.
(rust-darling-macro-0.10): Inherit from above.
| Nicolas Goaziou |
| 2021-06-08 | gnu: Add rust-darling-core-0.12....* gnu/packages/crates-io.scm (rust-darling-core-0.12): New variable.
(rust-darling-core-0.10): Inherit from above.
| Nicolas Goaziou |
| 2021-06-08 | gnu: rust-syn-1: Update to 1.0.72....* gnu/packages/crates-io.scm (rust-syn-1): Update to 1.0.72.
| Nicolas Goaziou |
| 2021-06-08 | gnu: rust-proc-macro2-1: Update to 1.0.27....* gnu/packages/crates-io.scm (rust-proc-macro2-1): Update to 1.0.27.
| Nicolas Goaziou |
| 2021-06-08 | gnu: rust-globset-0.4: Update to 0.4.6....* gnu/packages/crates-io.scm (rust-globset-0.4): Update to 0.4.6.
| Nicolas Goaziou |
| 2021-06-08 | gnu: rust-walkdir-2: Update to 2.3.2....* gnu/packages/crates-io.scm (rust-walkdir-2): Update to 2.3.2.
[arguments]<#:cargo-inputs> Reorder alphabetically.
| Nicolas Goaziou |
| 2021-06-08 | gnu: bsnes: Don't build native binaries....* gnu/packages/emulators.scm (bsnes)[arguments]: Add configure-flag to
not build native binaries.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| nixo |
| 2021-06-08 | gnu: Add u-boot-sifive-unmatched....* gnu/packages/bootloaders.scm (u-boot-sifive-unmatched): New variable.
| Efraim Flashner |
| 2021-06-08 | gnu: u-boot-2021.07: Update to 2021.07-rc4....* gnu/packages/bootloaders.scm (u-boot-2021.07): Update to 2021.07-rc4.
| Efraim Flashner |
| 2021-06-08 | grafts: Cache the derivation/graft mapping for the whole session....Partly fixes <https://bugs.gnu.org/41702>.
Reported by Lars-Dominik Braun <ldb@leibniz-psychology.org>.
Previously, 'graft-derivation' would start anew at every call. When
creating a profile with lots of packages, it would potentially do the
same work multiple times. The per-session cache addresses this. It
increases the derivation-graft-cache hit rate from 77.9% to 80.1% on:
GUIX_PROFILING="derivation-graft-cache" ./pre-inst-env \
guix environment --ad-hoc libreoffice inkscape krita darktable -n
The effect is more visible on the pathological case below, where cache
hit rate goes from 75% to 87% and wall-clock time from 5.0s to 3.5s:
GUIX_PROFILING="derivation-graft-cache" ./pre-inst-env \
guix environment --ad-hoc r-learnr --search-paths
* guix/grafts.scm (%graft-cache): New variable.
(graft-derivation): Add calls to 'store-connection-cache' and
'set-store-connection-cache!'.
| Ludovic Courtès |
| 2021-06-08 | store: 'references/cached' now uses a per-session cache....* guix/store.scm (%reference-cache): Remove.
(%reference-cache-id): New variable.
(references/cached): Rewrite in terms of it.
| Ludovic Courtès |
| 2021-06-08 | store: Remove 'references/substitutes'....This procedure lost its only user in commit
710854304b1ab29332edcb76f3de532e0724c197.
* guix/store.scm (references/substitutes): Remove.
* tests/store.scm ("references/substitutes missing reference info")
("references/substitutes with substitute info"): Remove.
| Ludovic Courtès |
| 2021-06-08 | grafts: Use SRFI-71 instead of SRFI-11....* guix/grafts.scm (reference-origins): Use SRFI-71 'let*'.
| Ludovic Courtès |
| 2021-06-08 | grafts: Record cache lookups for profiling....* guix/grafts.scm (record-cache-lookup!): New procedure.
(with-cache): Use it.
| Ludovic Courtès |
| 2021-06-08 | store: Generalize cache lookup recording....* guix/store.scm (cache-lookup-recorder): New procedure.
(record-cache-lookup!): Define in terms of it.
| Ludovic Courtès |
| 2021-06-08 | store: Support dynamic allocation of per-connection caches....* guix/store.scm (<store-connection>)[object-cache]: Remove.
[caches]: New field.
(open-connection, port->connection): Adjust '%make-store-connection'
calls accordingly.
(%store-connection-caches, %object-cache-id): New variables.
(allocate-store-connection-cache, vector-set)
(store-connection-cache, set-store-connection-cache)
(set-store-connection-caches!, set-store-connection-cache!): New
procedures.
(cache-object-mapping): Add #:cache parameter.
(set-store-connection-object-cache!): Remove.
(lookup-cached-object): Use 'store-connection-cache'.
(run-with-store): Use 'store-connection-caches' and
'set-store-connection-caches!'.
| Ludovic Courtès |
| 2021-06-08 | gnu: pantheon: Use modern 'define-module' syntax....The :prefix bit introduced in 9f59a9b4bc93b3ef6cd3bd1c9eed04c30ba2d2d4
led to a test failure in 'tests/graph.scm'.
* gnu/packages/pantheon.scm: Write #:prefix, not :prefix.
| Ludovic Courtès |
| 2021-06-08 | doc: Update minimum Guile-Git version....* doc/guix.texi (Requirements): Update Guile-Git version.
| Ludovic Courtès |
| 2021-06-08 | news: Fix typo....* etc/news.scm: Remove 'x' introduced by mistake in
dfdcd9d812d20a86babc4da8a01bc17e44900c3c.
| Ludovic Courtès |
| 2021-06-08 | gnu: python-mappy: Move to (gnu packages bioinformatics)....* gnu/packages/python-xyz.scm (python-mappy): Move to ...
* gnu/packages/bioinformatics.scm: ... here.
| Efraim Flashner |
| 2021-06-08 | gnu: jami: Update to 20210606.1.e2f9490....* gnu/packages/jami.scm (jami): Update to 20210606.1.e2f9490.
(pjproject-jami)[0019-ignore-down-interfaces]: Apply new custom patch.
(jami-qt)[source]: Use %jami-sources, which now includes the Qt client.
[phases]{change-directory}: New phase.
| Maxim Cournoyer |
| 2021-06-08 | gnu: jami: Always include the custom Jami patches with the sources....Before this change, there was a Jami origin containing the sources with the
patches, and another one containing the sources but with the patches removed.
Unify the source to always contain the patches, which adds just 1 MiB to the
corresponding tarball and simplifies things.
* gnu/packages/jami.scm (%jami-sources): Make it a simple variable. Move the
docstring to a comment. Only remove the tarballs, always keeping the patches
with the sources. Adjust the comments.
(%sfl-patches): Remove variable.
(jami-apply-dependency-patches): Rename to...
(jami-apply-custom-patches): ... this. Adjust the input label used to
'jami-sources'.
(pjproject-jami): Replace %sfl-patches by %jami-sources. Adjust following the
renaming of the jami-apply-custom-patches procedure.
(ffmpeg-jami): Likewise. Do not make a temporary binding, simply call the
unquoted jami-apply-custom-patches procedure.
| Maxim Cournoyer |
| 2021-06-08 | gnu: opendht: Update to 2.2.0rc7-1.c8a0b44....* gnu/packages/networking.scm (opendht): Update to 2.2.0rc7-1.c8a0b44.
| Maxim Cournoyer |
| 2021-06-07 | gnu: Add l3afpad....* gnu/packages/text-editors.scm (l3afpad): New variable.
| Leo Famulari |
| 2021-06-08 | gnu: pigx-rnaseq: Update to 0.0.17....* gnu/packages/bioinformatics.scm (pigx-rnaseq): Update to 0.0.17.
[arguments]: Remove "use-latest-salmon" phase; add "set-timezone" phase.
[inputs]: Replace r-gprofiler with r-gprofiler2; add r-ggpubr and
python-deeptools.
[native-inputs]: Add tzdata.
| Ricardo Wurmus |
| 2021-06-07 | gnu: ghostwriter: Update to 2.0.1....* gnu/packages/text-editors.scm (ghostwriter): Update to 2.0.1.
| Leo Famulari |
| 2021-06-07 | gnu: python-pikepdf: Update to 2.12.2....* gnu/packages/python-xyz.scm (python-pikepdf): Update to 2.12.2.
| Nicolas Goaziou |
| 2021-06-07 | gnu: dino: Update to 0.2.1 [fixes CVE-2021-33896]....* gnu/packages/messaging.scm (dino): Update to 0.2.1.
Signed-off-by: Leo Famulari <leo@famulari.name>
| Jack Hill |
| 2021-06-07 | gnu: qtwebengine: Enable H.264 WebRTC encoding....* gnu/packages/qt.scm (qtwebengine)[inputs]: Add openh264.
[source]: Remove bundled openh264.
[arguments]: Adjust build scripts accordingly in the 'substitute-source' phase.
Pass '-webengine-proprietary-codecs' in the custom 'configure' phase.
Signed-off-by: Leo Famulari <leo@famulari.name>
| Sergey Trofimov |
| 2021-06-07 | gnu: youtube-dl: Update to 2021.06.06....* gnu/packages/video.scm (youtube-dl): Update to 2021.06.06.
Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
| Xinglu Chen |
| 2021-06-07 | gnu: isync: Update to 1.4.2....* gnu/packages/mail.scm (isync): Update to 1.4.2.
Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
| Xinglu Chen |
| 2021-06-07 | gnu: pigx-rnaseq: Adjust to upgrade of salmon....* gnu/packages/bioinformatics.scm (pigx-rnaseq)[arguments]: Add phase
"use-latest-salmon".
| Ricardo Wurmus |
| 2021-06-07 | gnu: salmon: Update to 1.4.0....* gnu/packages/bioinformatics.scm (salmon): Update to 1.4.0.
[arguments]: Remove unnecessary flags, add other soon-to-be-unnecessary flags;
remove "prepare-rapmap" phase, add "prepare-pufferfish" phase, add
"fix-error-message-in-tests" phase, simplify "use-system-libraries" phase.
[inputs]: Add curl and pufferfish sources; remove libdivsufsort and rapmap
sources.
| Ricardo Wurmus |
| 2021-06-07 | gnu: cereal: Update to 1.3.0....* gnu/packages/serialization.scm (cereal): Update to 1.3.0.
| Ricardo Wurmus |
| 2021-06-07 | gnu: macs: Update to 2.2.7.1....* gnu/packages/bioinformatics.scm (macs): Update to 2.2.7.1.
| Ricardo Wurmus |
| 2021-06-07 | gnu: libgff: Update to 2.0.0....* gnu/packages/bioinformatics.scm (libgff): Update to 2.0.0.
[home-page]: Update to new home.
| Ricardo Wurmus |
| 2021-06-07 | gnu: jellyfish: Update to 2.3.0....* gnu/packages/bioinformatics.scm (jellyfish): Update to 2.3.0.
[arguments]: Disable SSE to avoid tuning to the build node's CPU.
[native-inputs]: Replace python-2 with python-wrapper.
[license]: Update.
| Ricardo Wurmus |
| 2021-06-07 | gnu: sbcl-fof: Update to 0.2.0....* gnu/packages/lisp-xyz.scm (sbcl-fof): Update to 0.2.0.
| Pierre Neidhardt |
| 2021-06-07 | etc: Add "bordeaux.guix.gnu.org.pub" public key file....* etc/substitutes/bordeaux.guix.gnu.org.pub: New file.
* Makefile.am (dist_pkgdata_DATA): Add it.
* guix/self.scm (miscellaneous-files): Add
"share/guix/bordeaux.guix.gnu.org.pub".
| Christopher Baines |
| 2021-06-07 | gnu: guix-build-coordinator: Update to 0-31.4a47417....* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-31.4a47417.
| Christopher Baines |
| 2021-06-07 | gnu: multiqc: Update to 1.10.1....* gnu/packages/bioinformatics.scm (multiqc): Update to 1.10.1.
[arguments]: Remove build phase "relax-requirements"; replace "check" phase.
[propagated-inputs]: Add python-coloredlogs, python-future, python-networkx,
and python-rich; remove python-nose.
[native-inputs]: Add python-pytest and the test suite.
| Ricardo Wurmus |
| 2021-06-07 | gnu: Add python-rich....* gnu/packages/python-xyz.scm (python-rich): New variable.
| Ricardo Wurmus |
| 2021-06-07 | gnu: python-dataclasses: Update to 0.8....* gnu/packages/python-xyz.scm (python-dataclasses): Update to 0.8.
| Ricardo Wurmus |
| 2021-06-07 | gnu: python-attrs: Update to 21.2.0....* gnu/packages/python-xyz.scm (python-attrs): Update to 21.2.0.
(python-attrs-bootstrap): Keep this at 19.3.0 to avoid mass rebuilds.
| Ricardo Wurmus |
| 2021-06-07 | gnu: python-attrs: Conditionally execute tests....* gnu/packages/python-xyz.scm (python-attrs)[arguments]: Wrap "check" phase in
conditional expression.
| Ricardo Wurmus |
| 2021-06-07 | gnu: python-hic2cool: Update to 0.8.3....* gnu/packages/bioinformatics.scm (python-hic2cool): Update to 0.8.3.
[source]: Download using git-fetch.
[arguments]: Enable tests. Add phase to make test data writable.
[propagated-inputs]: Add python-h5py, python-numpy, python-pandas,
python-scipy.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| Mădălin Ionel Patrașcu |
