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2024-02-10gnu: r-aws: Update to 2.5-5.Ricardo Wurmus
* gnu/packages/cran.scm (r-aws): Update to 2.5-5. Change-Id: I39f0394bfed327c04c275e1c42d2d47b2cef27fe
2024-02-10gnu: r-lisreltor: Update to 0.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-lisreltor): Update to 0.3. Change-Id: I423e7116d80f236c39a3f30d4f9e3717658433a9
2024-02-10gnu: r-lim: Update to 1.4.7.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-lim): Update to 1.4.7.1. Change-Id: Ibe9c04b0f0e7109f9e01f4902f034175da933fb6
2024-02-10gnu: r-idpmisc: Update to 1.1.21.Ricardo Wurmus
* gnu/packages/cran.scm (r-idpmisc): Update to 1.1.21. Change-Id: I5acf372d08a8a7829bd3d2f6e17897234bf0856a
2024-02-10gnu: r-smpracticals: Update to 1.4-3.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-smpracticals): Update to 1.4-3.1. Change-Id: I200db8be3842c8716a3e5583a43b975294e5e03e
2024-02-10gnu: r-parameters: Update to 0.21.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-parameters): Update to 0.21.5. Change-Id: If0de907fd0f0004468f3dcb4f4f5ca438a380c56
2024-02-10gnu: r-plot3d: Update to 1.4.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-plot3d): Update to 1.4.1. Change-Id: I5734b726f80b5ac06b217d0bcee90f1584823bfc
2024-02-10gnu: r-ggnewscale: Update to 0.4.10.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggnewscale): Update to 0.4.10. Change-Id: Icb68ac0a8ee0cf780b077869e9c6adbf53a2bb39
2024-02-10gnu: r-ggvis: Update to 0.4.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggvis): Update to 0.4.9. Change-Id: Iacdffbfb6ca558a3e1979bf63e76c04909924310
2024-02-10gnu: r-haplo-stats: Update to 1.9.5.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-haplo-stats): Update to 1.9.5.1. Change-Id: I9b0111e471f88766ccc2096cb65720f9716ad1a2
2024-02-10gnu: r-spdep: Update to 1.3-3.Ricardo Wurmus
* gnu/packages/cran.scm (r-spdep): Update to 1.3-3. Change-Id: Iab08e69f7a8bb5163a8dc5bd042ea19709316563
2024-02-10gnu: r-lemon: Update to 0.4.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-lemon): Update to 0.4.9. Change-Id: I31e9a3ae0e1e40bbf7806f891b26a7be13d1d346
2024-02-10gnu: r-remacor: Update to 0.0.18.Ricardo Wurmus
* gnu/packages/cran.scm (r-remacor): Update to 0.0.18. Change-Id: I20b0441a601a03cbfe3fa99382913491c73b267f
2024-02-10gnu: r-cobs: Update to 1.3-7.Ricardo Wurmus
* gnu/packages/cran.scm (r-cobs): Update to 1.3-7. Change-Id: I2f3cdef942b6875e5072b7802871308cff78b090
2024-02-10gnu: r-rnaturalearthdata: Update to 1.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-rnaturalearthdata): Update to 1.0.0. [propagated-inputs]: Remove r-sp. Change-Id: Ib649f9242b14aa2c167ce480c768d2e4a1f98a88
2024-02-10gnu: r-multicool: Update to 1.0.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-multicool): Update to 1.0.1. Change-Id: I347ada2b10281ddc90a0e0cf5859fc0dbedea7e0
2024-02-10gnu: r-rcpphnsw: Update to 0.6.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcpphnsw): Update to 0.6.0. Change-Id: Id6e99e2a081b73711f3e4f64a00c0d205a8aa9f5
2024-02-10gnu: r-ggeffects: Update to 1.4.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggeffects): Update to 1.4.0. Change-Id: I61183ed38aeae82b40d4c5479d13e7e5d9a60e4a
2024-02-10gnu: r-tarchetypes: Update to 0.7.12.Ricardo Wurmus
* gnu/packages/cran.scm (r-tarchetypes): Update to 0.7.12. Change-Id: Ib20dda1be9bfd9c6f7f36876303686e0be3a01b2
2024-02-10gnu: r-writexl: Update to 1.5.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-writexl): Update to 1.5.0. Change-Id: I5561f74f174dc3a803c63210cefed334cb4f7282
2024-02-10gnu: r-nodbi: Update to 0.10.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-nodbi): Update to 0.10.1. Change-Id: Iddd501fa36d0765cf24832531009da277abe97b4
2024-02-10gnu: r-officer: Update to 0.6.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-officer): Update to 0.6.4. Change-Id: I71997fa352044fa48ae26193bbc6e2a6d0efc344
2024-02-10gnu: r-ggseqlogo: Update to 0.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggseqlogo): Update to 0.2. [native-inputs]: Add r-knitr. Change-Id: Ia2cea22a0bd5f6c96303b82207dcbe6678d7d0c3
2024-02-10gnu: r-xfun: Update to 0.42.Ricardo Wurmus
* gnu/packages/cran.scm (r-xfun): Update to 0.42. Change-Id: I3e43a59fcaf2a50595c2efa11a0c9aaf11973170
2024-02-10gnu: r-cvxr: Update to 1.0-12.Ricardo Wurmus
* gnu/packages/cran.scm (r-cvxr): Update to 1.0-12. Change-Id: I94c8f094cbdac0c9533ffd604fc3b7a1b6fdac77
2024-02-10gnu: r-limsolve: Update to 1.5.7.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-limsolve): Update to 1.5.7.1. Change-Id: I12c1e939457aa272bdf073ad760b156c263f2196
2024-02-10gnu: r-extremes: Update to 2.1-4.Ricardo Wurmus
* gnu/packages/cran.scm (r-extremes): Update to 2.1-4. Change-Id: Ie4e30f2ea18f4b5abbba401663e89cc1fc555b54
2024-02-10gnu: r-rmumps: Update to 5.2.1-27.Ricardo Wurmus
* gnu/packages/cran.scm (r-rmumps): Update to 5.2.1-27. Change-Id: I7e1eb956468de977a98f4835019421382e362131
2024-02-10gnu: r-ctrdata: Update to 1.17.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-ctrdata): Update to 1.17.1. Change-Id: Ibc5497bae7ba774aa066944b1a10e90c66038224
2024-02-10gnu: r-rcppthread: Update to 2.1.7.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcppthread): Update to 2.1.7. Change-Id: Ia97e0a99216feaeed4fb6971da36d8521cc0414d
2024-02-10gnu: r-servr: Update to 0.29.Ricardo Wurmus
* gnu/packages/cran.scm (r-servr): Update to 0.29. Change-Id: Id3cd1434a8653d280d1d1114222d1313046a98f0
2024-02-10gnu: r-aer: Update to 1.2-12.Ricardo Wurmus
* gnu/packages/cran.scm (r-aer): Update to 1.2-12. Change-Id: Ibdc99bf4a72aded3e76b8f21b95007d9b9d89189
2024-02-10gnu: r-knitrbootstrap: Update to 1.0.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-knitrbootstrap): Update to 1.0.3. [native-inputs]: Add r-knitr. Change-Id: Ic049e0c898f7c6a258796a59d87972fc9e0a6ff3
2024-02-10gnu: r-nmf: Update to 0.27.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-nmf): Update to 0.27. Change-Id: I85f44258abaaceeef6d20e3b3f29512560f5efbb
2024-02-10gnu: whoogle-search: Update to 0.8.4.Skylar Chan
* gnu/packages/python-web.scm (whoogle-search): Update to 0.8.4. [propagated-inputs]: Add python-validators. Change-Id: I4543808d662e7e946c8a398b28ca963e75d4bfd1 Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-02-10gnu: clojure-tools: Update to 1.11.1.1200.Rostislav Svoboda
* gnu/packages/clojure.scm (clojure-tools): Update to 1.11.1.1200. Change-Id: Ifcd272ab679c5a8634167cfd289ca6719c36bbdb Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-02-10gnu: execline: Correct symlink permissions on the hurd.Christopher Baines
* gnu/packages/skarnet.scm (execline)[arguments]: Patch tools/install.sh umask. Change-Id: I1e5d2497e1fd2ad8a39a5e1ca1c3c409968204a8
2024-02-10build-system: perl: Accept Gexps for #:module-build-flags.Christopher Baines
Matching the change in 2d40e6f7ab04ec367a9a7fc1af3daa507fb60d3c otherwise the cross build derivations are broken, as was the case for emacs-pde. * guix/build-system/perl.scm (perl-cross-build) [module-build-flags]: Accept gexps. Change-Id: I2dc85bc50bc077581e3abfc5baaedc6487118192
2024-02-10gnu: Add python-pdbfixer.nafkhamdc
* gnu/packages/bioinformatics.scm (python-pdbfixer): New variable. Change-Id: I2894a08ab3eed463f052b9df6372d4016b718d1a Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2024-02-10gnu: nvc: Update to 1.11.3.Danny Milosavljevic
* gnu/packages/fpga.scm (nvc): Update to 1.11.3. [inputs]: Add zstd. Change-Id: I7347a047a559c15beec75bfe5feb0b15a6cc5584
2024-02-09gnu: patool: Update to 2.1.1.Sharlatan Hellseher
* gnu/packages/patool.scm (patool): Update to 2.1.1. Change-Id: I86a5e93b10e377a6705c3b7f4a822d8d54f66483
2024-02-09gnu: patool: Fix build.Sharlatan Hellseher
* gnu/packages/patool.scm (patool): Fix build. [build-system]: Swap to pyproject-build-system. [arguments] <#:test-flags>: Disable failing tests. Change-Id: I53ccec4b39bfae6649bfd715fdb2158b2f7a33e1
2024-02-09gnu: vale: Remove package labeles.Sharlatan Hellseher
* gnu/packages/textutils.scm (vale) [native-inputs]: Remove labeles. Change-Id: Id6ac7bcf26b90291b2ec9de18cde8078f6f8f115
2024-02-09gnu: Deprecate the go-github-com-errata-ai-vale variable.Sharlatan Hellseher
* gnu/packages/ipfs.scm (go-github-com-errata-ai-vale): Rename to "vale". (go-github-com-errata-ai-vale): Define as deprecated by "vale". Change-Id: I3c715a36295cd52e36b16e99f39455b7ad961743
2024-02-09gnu: packages: textuitils: Sort use-module alphabetically.Sharlatan Hellseher
* gnu/packages/textutils.scm: Sort use-module alphabetically to ease maintenance. Change-Id: Ia698a0b3e137ce2fc2f68d0206d209649acdad5e
2024-02-09gnu: moe: Update to 1.14.Andy Tai
* gnu/packages/moe.scm (moe): Update to 1.14. Change-Id: I176ec1a3a2505a4e50426863282dbc73815ae904 Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-02-09gnu: gama: Update to 2.28.Andy Tai
* gnu/packages/gps.scm (gama): Update to 2.28. Change-Id: I5e74bf81e158970559e4937c9563578eae253241 Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-02-09gnu: wlr-randr: Update to 0.4.0.Timotej Lazar
* gnu/packages/wm.scm (wlr-randr): Update to 0.4.0. Change-Id: I3a04bf965c4ec098268c9ac4a1328c6ca575cf9e Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-02-09gnu: mupdf: Update to 1.23.9.Timotej Lazar
* gnu/packages/pdf.scm (mupdf): Update to 1.23.9. Change-Id: Id67767304d33a09df8cea7b91111729d0bc99366 Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-02-09gnu: dos2unix: Update to 7.5.2.Timotej Lazar
* gnu/packages/textutils.scm (dos2unix): Update to 7.5.2. Change-Id: I8b27da05c0780fe942fe19f00766cd2772c66bc0 Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>