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2023-04-02gnu: Add python-clingraph.Liliana Marie Prikler
* gnu/packages/potassco.scm (python-clingraph): New variable.
2023-04-02gnu: Separate potassco packages into their own module.Liliana Marie Prikler
* gnu/packages/potassco.scm: New file. * gnu/packages/maths.scm (libpotassco, clasp, clingo, python-clingo) (python-telingo): Move to potassco module. Adjust imports accordingly. * gnu/packages/emacs-xyz.scm (emacs-pasp-mode): Move to potassco module. * gnu/local.mk (GNU_SYSTEM_MODULES): Add %D%/packages/potassco.scm.
2023-04-02gnu: python-imageio: Update to 2.26.0.Liliana Marie Prikler
* gnu/packages/python-xyz.scm (python-imageio): Update to 2.26.0. [build-system]: Use pyproject-build-system. [arguments]: Use G-Expressions. <#:tests?>: Drop argument. <#:test-flags>: New argument. <#:phases>: Drop replacement for ‘check’. Add ‘fix-source’ and ‘fix-failing-tests’. [inputs]: Add freeimage. [propagated-inputs]: Add python-imageio-ffmpeg.
2023-04-02gnu: Add python-imageio-ffmpeg.Liliana Marie Prikler
* gnu/packages/python-xyz.scm (python-imageio-ffmpeg): New variable.
2023-04-01gnu: emacs-slime: Add missing propagated input.John Kehayias
Fixes error "Cannot open load file: No such file or directory, ../lib/macrostep" when trying to run slime. * gnu/packages/emacs-xyz.scm (emacs-slime)[propagated-inputs]: Add emacs-macrostep.
2023-04-01gnu: Add mecab-unidic.Julien Lepiller
* gnu/packages/language.scm (mecab-unidic): New variable.
2023-04-01gnu: Add mecab-ipadic.Julien Lepiller
* gnu/packages/language.scm (mecab-ipadic): New variable.
2023-04-01gnu: Add mecab.Julien Lepiller
* gnu/packages/language.scm (mecab): New variable. * gnu/packages/patches/mecab-variable-param.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2023-03-31gnu: conan: Disable more flaky tests.Maxim Cournoyer
* gnu/packages/package-management.scm (conan) [arguments]: Run test suite verbosely. Skip the test_toolchain and test_list tests.
2023-03-31gnu: conan: Do not hard-code package versions.Maxim Cournoyer
* gnu/packages/package-management.scm (conan) [arguments]: Add #:modules argument. Avoid hard-coding package versions in configure-tests phase.
2023-03-31gnu: r-bionero: Update to 1.6.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bionero): Update to 1.6.1.
2023-03-31gnu: r-flowclust: Update to 3.36.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-flowclust): Update to 3.36.1.
2023-03-31gnu: r-rhdf5filters: Update to 1.10.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-rhdf5filters): Update to 1.10.1.
2023-03-31gnu: r-biomart: Update to 2.54.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.54.1.
2023-03-31gnu: r-annotationforge: Update to 1.40.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-annotationforge): Update to 1.40.2.
2023-03-31gnu: r-anvil: Update to 1.10.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-anvil): Update to 1.10.2.
2023-03-31gnu: r-amaretto: Update to 1.14.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-amaretto): Update to 1.14.0.
2023-03-31gnu: Add fbautostart.Danny Milosavljevic
* gnu/packages/wm.scm (fbautostart): New variable.
2023-03-31gnu: Add emu8051.c4droid
* gnu/packages/emulators.scm (emu8051): New variable. Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2023-03-31gnu: Add tree-sitter-heex.ivan-p-sokolov@ya.ru
gnu/packages/tree-sitter.scm (tree-sitter-heex): New variable. Signed-off-by: Andrew Tropin <andrew@trop.in>
2023-03-30gnu: linux-libre 5.15: Update to 5.15.105.Leo Famulari
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.105. (linux-libre-5.15-pristine-source): Update hash.
2023-03-30gnu: linux-libre 6.1: Update to 6.1.22.Leo Famulari
* gnu/packages/linux.scm (linux-libre-6.1-version): Update to 6.1.22. (linux-libre-6.1-pristine-source): Update hash.
2023-03-30gnu: linux-libre: Update to 6.2.9.Leo Famulari
* gnu/packages/linux.scm (linux-libre-6.2-version): Update to 6.2.9. (linux-libre-6.2-pristine-source): Update hash.
2023-03-31gnu: icedove: Update to 102.9.1 [fixes CVE-2023-28427].Jonathan Brielmaier
* gnu/packages/gnuzilla.scm (%icedove-version): Update to 102.9.1. (%icedove-build-id, thunderbird-comm-l10n): Update accordingly.
2023-03-30gnu: Add zsh-completionsTimo Wilken
* gnu/packages/shellutils.scm (zsh-completions): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-30gnu: Add zsh-history-substring-searchTimo Wilken
* gnu/packages/shellutils.scm (zsh-history-substring-search): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-30services: pam-limits-service-type: Deprecate file-like object support in ↵Bruno Victal
favour for lists as service value. * doc/guix.texi (Base Services): Document it. * gnu/local.mk: Register test. * gnu/services/base.scm (pam-limits-service-type): Accept both lists and file-like objects. Deprecate file-like object support. * gnu/tests/pam.scm: New file. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-30services: base: Deprecate 'pam-limits-service' procedure.Bruno Victal
* doc/guix.texi (Base Services): Replace pam-limits-service with pam-limits-service-type. * gnu/packages/benchmark.scm (python-locust)[description]: Update index anchor to manual. * gnu/services/base.scm (pam-limits-service-type): Set default value. (pam-limits-service): Deprecate procedure. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-30system: Remove obsolete GUIX_LOCPATH workaround.Bruno Victal
* gnu/system.scm (operating-system-environment-variables): Do not set GUIX_LOCPATH. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-30gnu: Add scilab.Nicolas Graves
* gnu/packages/maths.scm (scilab): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-30gnu: Add suitesparse-3.Nicolas Graves
* gnu/packages/maths.scm (suitesparse-3): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-30gnu: matio: Add header file.Nicolas Graves
* gnu/packages/maths.scm (matio): [arguments] (phases): Add phase install-matioConfig.h. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-30gnu: Add audmes.Ricardo Wurmus
* gnu/packages/engineering.scm (audmes): New variable.
2023-03-30Revert "gnu: network-manager: Update to 1.43.4."Maxim Cournoyer
This reverts commit 01984774a27f12991f109edabb5527f838557ccd. It is apparently a development snapshot, and while working great for the most part, it caused issues with WPA2 Enterprise WiFi configuration in nm-connection-editor (see: https://issues.guix.gnu.org/62496). Reported-by: John Kehayias <john.kehayias@protonmail.com>
2023-03-30gnu: conan: Update to 2.0.2.Maxim Cournoyer
* gnu/packages/package-management.scm (conan): Update to 2.0.2. [arguments]: Delete relax-requirements phase. Update patch-paths phase. Add new patch-hard-coded-GCC-references, use-current-cmake-for-tests and configure-tests phases. Update check phase. [native-inputs]: Replace autoconf with autoconf-wrapper. Add libtool.
2023-03-30gnu: conan: Use gexps and remove input labels.Maxim Cournoyer
* gnu/packages/package-management.scm (conan) [arguments]: Use gexps. Use search-input-file in patch-paths phase. [native-inputs]: Remove labels.
2023-03-30gnu: r-mumin: Update to 1.47.5.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mumin): Update to 1.47.5. [propagated-inputs]: Add r-insight.
2023-03-30gnu: r-tclust: Update to 1.5-4.Ricardo Wurmus
* gnu/packages/statistics.scm (r-tclust): Update to 1.5-4.
2023-03-30gnu: r-car: Update to 3.1-2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-car): Update to 3.1-2.
2023-03-30gnu: r-robustbase: Update to 0.95-1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-robustbase): Update to 0.95-1.
2023-03-30gnu: r-hexbin: Update to 1.28.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-hexbin): Update to 1.28.3.
2023-03-30gnu: r-glmnet: Update to 4.1-7.Ricardo Wurmus
* gnu/packages/statistics.scm (r-glmnet): Update to 4.1-7.
2023-03-30gnu: r-segmented: Update to 1.6-3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-segmented): Update to 1.6-3.
2023-03-30gnu: r-rcurl: Update to 1.98-1.12.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rcurl): Update to 1.98-1.12. [inputs]: Remove zlib.
2023-03-30gnu: r-gtable: Update to 0.3.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-gtable): Update to 0.3.3.
2023-03-30gnu: r-rmarkdown: Update to 2.21.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.21. [propagated-inputs]: Add r-fontawesome.
2023-03-30gnu: r-hms: Update to 1.1.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-hms): Update to 1.1.3. [propagated-inputs]: Remove r-ellipsis.
2023-03-30gnu: r-dbplyr: Update to 2.3.2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dbplyr): Update to 2.3.2.
2023-03-30gnu: r-dplyr: Update to 1.1.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dplyr): Update to 1.1.1.
2023-03-30gnu: r-gdtools: Update to 0.3.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-gdtools): Update to 0.3.3. [propagated-inputs]: Remove r-memoise.
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