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2020-09-11gnu: r-maldiquant: Move to (gnu packages cran).zimoun
* gnu/packages/bioinformatics.scm (r-maldiquant): Move from here... * gnu/packages/cran.scm (r-maldiquant): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: r-seqminer: Move to (gnu packages cran).zimoun
* gnu/packages/bioinformatics.scm (r-seqminer): Move from here... * gnu/packages/cran.scm (r-seqminer): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: r-qtl2: Move to (gnu packages cran).zimoun
* gnu/packages/bioinformatics.scm (r-qtl2): Move from here... * gnu/packages/cran.scm (r-qtl2): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: r-qtl: Move to (gnu packages cran).zimoun
* gnu/packages/bioinformatics.scm (r-qtl): Move from here... * gnu/packages/cran.scm (r-qtl): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: r-igraph: Move to (gnu packages cran).zimoun
* gnu/packages/graph.scm (r-igraph): Move from here... * gnu/packages/cran.scm (r-igraph): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: r-diffusionmap: Move to (gnu packages cran).zimoun
* gnu/packages/graph.scm (r-diffusionmap): Move from here... * gnu/packages/cran.scm (r-diffusionmap): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: r-adaptivesparsity: Move to (gnu packages cran).zimoun
* gnu/packages/machine-learning.scm (r-adaptivesparsity): Move from here... * gnu/packages/cran.scm (r-adaptivesparsity): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: r-codedepends: Comment why it is in bioconductor.scm.zimoun
* gnu/packages/bioconductor.scm (r-codedepends): Add comment.
2020-09-11gnu: Add r-fhtest.Peter Lo
* gnu/packages/bioconductor.scm (r-fhtest): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-interval.Peter Lo
* gnu/packages/bioconductor.scm (r-interval): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-perm.Peter Lo
* gnu/packages/cran.scm (r-perm): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-mlecens.Peter Lo
* gnu/packages/cran.scm (r-mlecens): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-icens.Peter Lo
* gnu/packages/bioconductor.scm (r-icens): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: r-tidymodels: Update to 0.1.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-tidymodels): Update to 0.1.1. [propagated-inputs]: Remove r-pillar, r-tidyposterior, r-tidypredict, and r-tidytext; add r-modeldata and r-tidyr. [native-inputs]: Add r-rmarkdown, pandoc, and pandoc-citeproc.
2020-09-11gnu: r-infer: Update to 0.5.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-infer): Update to 0.5.3.
2020-09-11gnu: Add r-modeldata.Ricardo Wurmus
* gnu/packages/cran.scm (r-modeldata): New variable.
2020-09-11gnu: r-parsnip: Update to 0.1.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-parsnip): Update to 0.1.3.
2020-09-11gnu: r-tidytext: Update to 0.2.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-tidytext): Update to 0.2.5. [propagated-inputs]: Remove r-stopwords; add r-tibble.
2020-09-11gnu: r-tidypredict: Update to 0.4.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-tidypredict): Update to 0.4.6.
2020-09-11gnu: r-tune: Update to 0.1.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-tune): Update to 0.1.1. [propagated-inputs]: Add r-vctrs.
2020-09-11gnu: r-dials: Update to 0.0.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-dials): Update to 0.0.8.
2020-09-11gnu: r-yardstick: Update to 0.0.7.Ricardo Wurmus
* gnu/packages/cran.scm (r-yardstick): Update to 0.0.7. [propagated-inputs]: Remove r-rcpp.
2020-09-11gnu: r-workflows: Update to 0.1.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-workflows): Update to 0.1.3.
2020-09-11gnu: r-hardhat: Update to 0.1.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-hardhat): Update to 0.1.4.
2020-09-11gnu: Add r-tidymodels.Peter Lo
* gnu/packages/cran.scm (r-tidymodels): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-infer.Peter Lo
* gnu/packages/cran.scm (r-infer): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-parsnip.Peter Lo
* gnu/packages/cran.scm (r-parsnip): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-tidytext.Peter Lo
* gnu/packages/cran.scm (r-tidytext): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-hunspell.Peter Lo
* gnu/packages/cran.scm (r-hunspell): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-tokenizers.Peter Lo
* gnu/packages/cran.scm (r-tokenizers): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-janeaustenr.Peter Lo
* gnu/packages/cran.scm (r-janeaustenr): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-tidypredict.Peter Lo
* gnu/packages/cran.scm (r-tidypredict): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-tidyposterior.Peter Lo
* gnu/packages/cran.scm (r-tidyposterior): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-tune.Peter Lo
* gnu/packages/cran.scm (r-tune): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-dials.Peter Lo
* gnu/packages/cran.scm (r-dials): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-dicedesign.Peter Lo
* gnu/packages/cran.scm (r-dicedesign): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-rsample.Peter Lo
* gnu/packages/cran.scm (r-rsample): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-yardstick.Peter Lo
* gnu/packages/cran.scm (r-yardstick): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-gpfit.Peter Lo
* gnu/packages/cran.scm (r-gpfit): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-hardhat.Peter Lo
* gnu/packages/cran.scm (r-hardhat): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add r-workflows.Peter Lo
* gnu/packages/cran.scm (r-workflows): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11gnu: Add reproc.Alexandros Theodotou
* gnu/packages/cpp.scm (reproc): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-09-11daemon: Simplify interface with 'guix authenticate'.Ludovic Courtès
There's no reason at this point to mimic the calling convention of the 'openssl' command. * nix/libstore/local-store.cc (LocalStore::exportPath): Add only "sign" and HASH to ARGS. Remove 'tmpDir' and 'hashFile'. (LocalStore::importPath): Add only "verify" and SIGNATURE to * guix/scripts/authenticate.scm (guix-authenticate): Adjust accordingly; remove the OpenSSL-style clauses. (read-hash-data): Remove. (sign-with-key): Replace 'port' with 'sha256' and adjust accordingly. (validate-signature): Export SIGNATURE to be a canonical sexp. * tests/guix-authenticate.sh: Adjust tests accordingly.
2020-09-11doc: Distinguish the "nar bundle" format from "nar".Ludovic Courtès
* doc/guix.texi (Invoking guix archive): Introduce the term "nar bundle" and clarify what the output of "guix archive --export" really is. * guix/nar.scm (restore-one-item, restore-file-set): Use the term "nar bundle" in docstrings.
2020-09-11store: Test 'import-paths' with unauthorized and unsigned nar bundles.Ludovic Courtès
* tests/store.scm ("import not signed") ("import signed by unauthorized key"): New tests.
2020-09-11gnu: hangups: Update to 0.4.11.Tobias Geerinckx-Rice
* gnu/packages/messaging.scm (hangups): Update to 0.4.11.
2020-09-11gnu: samplv1: Update to 0.9.17.Tobias Geerinckx-Rice
* gnu/packages/music.scm (samplv1): Update to 0.9.17.
2020-09-11gnu: drumkv1: Update to 0.9.17.Tobias Geerinckx-Rice
* gnu/packages/music.scm (drumkv1): Update to 0.9.17.
2020-09-11gnu: synthv1: Update to 0.9.17.Tobias Geerinckx-Rice
* gnu/packages/music.scm (synthv1): Update to 0.9.17.
2020-09-11gnu: moreutils: Update to 0.64.Tobias Geerinckx-Rice
* gnu/packages/moreutils.scm (moreutils): Update to 0.64.
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