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2021-07-28gnu: r-isoband: Update to 0.2.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-isoband): Update to 0.2.5.
2021-07-28gnu: r-seewave: Update to 2.1.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-seewave): Update to 2.1.8.
2021-07-28gnu: r-showtext: Update to 0.9-3.Ricardo Wurmus
* gnu/packages/cran.scm (r-showtext): Update to 0.9-3.
2021-07-28gnu: r-sysfonts: Update to 0.8.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-sysfonts): Update to 0.8.4.
2021-07-28gnu: r-styler: Update to 1.5.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-styler): Update to 1.5.1.
2021-07-28gnu: r-rttf2pt1: Update to 1.3.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-rttf2pt1): Update to 1.3.9.
2021-07-28gnu: r-adegenet: Update to 2.1.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-adegenet): Update to 2.1.4.
2021-07-28gnu: r-wk: Update to 0.5.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-wk): Update to 0.5.0.
2021-07-28gnu: r-compositions: Update to 2.0-2.Ricardo Wurmus
* gnu/packages/cran.scm (r-compositions): Update to 2.0-2.
2021-07-28gnu: r-parallelly: Update to 1.27.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-parallelly): Update to 1.27.0.
2021-07-28gnu: r-rgl: Update to 0.107.10.Ricardo Wurmus
* gnu/packages/cran.scm (r-rgl): Update to 0.107.10. [propagated-inputs]: Remove r-manipulatewidget and r-shiny.
2021-07-28gnu: r-afex: Update to 1.0-1.Ricardo Wurmus
* gnu/packages/cran.scm (r-afex): Update to 1.0-1.
2021-07-28gnu: r-credentials: Update to 1.3.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-credentials): Update to 1.3.1.
2021-07-28gnu: r-sjplot: Update to 2.8.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-sjplot): Update to 2.8.9. [propagated-inputs]: Add r-datawizard.
2021-07-28gnu: r-performance: Update to 0.7.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-performance): Update to 0.7.3. [propagated-inputs]: Add r-datawizard.
2021-07-28gnu: r-bayestestr: Update to 0.10.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-bayestestr): Update to 0.10.5. [propagated-inputs]: Add r-datawizard.
2021-07-28gnu: r-glmmtmb: Update to 1.1.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-glmmtmb): Update to 1.1.2.
2021-07-28gnu: r-survey: Update to 4.1-1.Ricardo Wurmus
* gnu/packages/cran.scm (r-survey): Update to 4.1-1.
2021-07-28gnu: r-doby: Update to 4.6.11.Ricardo Wurmus
* gnu/packages/cran.scm (r-doby): Update to 4.6.11.
2021-07-28gnu: r-flextable: Update to 0.6.7.Ricardo Wurmus
* gnu/packages/cran.scm (r-flextable): Update to 0.6.7.
2021-07-28gnu: r-officer: Update to 0.3.19.Ricardo Wurmus
* gnu/packages/cran.scm (r-officer): Update to 0.3.19.
2021-07-28gnu: r-renv: Update to 0.14.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-renv): Update to 0.14.0.
2021-07-28gnu: r-rastervis: Update to 0.50.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-rastervis): Update to 0.50.3.
2021-07-28gnu: r-vim: Update to 6.1.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-vim): Update to 6.1.1.
2021-07-28gnu: r-utf8: Update to 1.2.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-utf8): Update to 1.2.2. [native-inputs]: Add r-rmarkdown.
2021-07-28gnu: r-cli: Update to 3.0.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-cli): Update to 3.0.1.
2021-07-28gnu: r-laplacesdemon: Update to 16.1.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-laplacesdemon): Update to 16.1.6.
2021-07-28gnu: r-fastmatch: Update to 1.1-3.Ricardo Wurmus
* gnu/packages/cran.scm (r-fastmatch): Update to 1.1-3.
2021-07-28gnu: r-jpeg: Update to 0.1-9.Ricardo Wurmus
* gnu/packages/cran.scm (r-jpeg): Update to 0.1-9.
2021-07-28gnu: r-rvest: Update to 1.0.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-rvest): Update to 1.0.1.
2021-07-28gnu: r-ggpp: Update to 0.4.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggpp): Update to 0.4.1. [propagated-inputs]: Remove r-generics and r-plyr.
2021-07-28gnu: r-googlesheets4: Update to 1.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-googlesheets4): Update to 1.0.0. [propagated-inputs]: Remove r-lifecycle; add r-cli.
2021-07-28gnu: Add r-lobstr.Ricardo Wurmus
* gnu/packages/cran.scm (r-lobstr): New variable.
2021-07-28gnu: Add r-datawizard.Ricardo Wurmus
* gnu/packages/cran.scm (r-datawizard): New variable.
2021-07-28gnu: r-with-tests: Hardcode path to coreutils’ rmLars-Dominik Braun
When running R in a container like this guix environment --no-cwd -C --ad-hoc r-minimal -- Rscript -e 'Sys.timezone()' it would print an additional line sh: rm: command not found before exiting. * gnu/packages/statistics.scm (r-with-tests) [#:phases]: Add substitute* to patch call to `rm` and rename phase to reflect what it does now.
2021-07-28gnu: Add python-modin.Ricardo Wurmus
* gnu/packages/python-science.scm (python-modin): New variable.
2021-07-28gnu: Add python-distributed.Ricardo Wurmus
* gnu/packages/python-science.scm (python-distributed): New variable.
2021-07-28gnu: Add python-zict.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-zict): New variable.
2021-07-28gnu: Add python-heapdict.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-heapdict): New variable.
2021-07-28gnu: python-pyarrow: Fix parquet support.Ricardo Wurmus
Co-authored-by: Phil Beadling <phil@beadling.co.uk>. * gnu/packages/databases.scm (python-pyarrow)[arguments]: Add phases patch-cmake-variables, patch-parquet-library, and set-PYARROW_WITH_PARQUET. [propagated-inputs]: Add "include" output of apache-arrow package.
2021-07-28gnu: python-pandas: Update to 1.3.0.Ricardo Wurmus
* gnu/packages/python-science.scm (python-pandas): Update to 1.3.0. [arguments]: Adjust check phase.
2021-07-28gnu: python-dask: Update to 2021.7.1.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-dask): Update to 2021.7.1. [arguments]: Do not skip test_shuffle.
2021-07-28gnu: python-partd: Update to 1.2.0.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-partd): Update to 1.2.0.
2021-07-28gnu: python-numexpr: Update to 2.7.3.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-numexpr): Update to 2.7.3.
2021-07-28gnu: python-cloudpickle: Update to 1.6.0.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-cloudpickle-testpkg): New variable. (python-cloudpickle): Update to 1.6.0; inherit from python-cloudpickle-testpkg. [source]: Fetch from git repository. [native-inputs]: Add python-cloudpickle-testpkg; replace python-tornado with python-tornado-6.
2021-07-28gnu: python2-cloudpickle: Override version, source, and native-inputs.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python2-cloudpickle)[version]: Explicitly set to 1.3.0. [source]: Copy from base package. [native-inputs]: Do not inherit; copy.
2021-07-28gnu: cmake: Update to 3.21.1.Ricardo Wurmus
* gnu/packages/cmake.scm (cmake): Update to 3.21.1. [arguments]: Skip one more test.
2021-07-28gnu: julia-distances: Update flakey tests.Efraim Flashner
* gnu/packages/julia-xyz.scm (julia-distances)[arguments]: Adjust the custom 'skip-flakey-tests phase.
2021-07-28gnu: julia-docstringextensions: Skip tests.Efraim Flashner
* gnu/packages/julia-xyz.scm (julia-docstringextensions)[arguments]: Skip tests.
2021-07-28gnu: julia-datavalues: Skip tests.Efraim Flashner
* gnu/packages/julia-xyz.scm (julia-datavalues)[arguments]: Skip tests.
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