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2017-07-22gnu: r-s4vectors: Update to 0.14.3.•••* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.14.3. Ricardo Wurmus
2017-07-22gnu: r-genomicranges: Update to 1.28.4.•••* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.28.4. Ricardo Wurmus
2017-07-22gnu: Remove python-fake-factory leftovers.•••This is a followup to c799eb2eb8b1a820147af96988eddaa9f752994b. * gnu/packages/patches/python-fake-factory-fix-build-32bit.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Marius Bakke
2017-07-22gnu: Remove python-fake-factory.•••Superseded by python-faker since ce7911ddae5d30ba73c8c9552b7d4e71268e5db3. * gnu/packages/python.scm (python-fake-factory, python2-fake-factory): Remove variables. Marius Bakke
2017-07-22gnu: python-pyopenssl: Update to 17.2.0.•••* gnu/packages/patches/python-pyopenssl-17.1.0-test-overflow.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl): Update to 17.2.0. [native-inputs]: Add PYTHON-FLAKY. [source](patches): Remove. Marius Bakke
2017-07-22gnu: Add python-flaky.•••* gnu/packages/python.scm (python-flaky, python2-flaky): New variables. Marius Bakke
2017-07-22gnu: maim: Update to 5.4.64.•••* gnu/packages/xdisorg.scm (maim): Update to 5.4.64. Marius Bakke
2017-07-22gnu: slop: Update to 6.3.47.•••* gnu/packages/xdisorg.scm (slop): Update to 6.3.47. [inputs]: Add GLEW. Marius Bakke
2017-07-22gnu: parallel: Update to 20170722.•••* gnu/packages/parallel.scm (parallel): Update to 20170722. Tobias Geerinckx-Rice
2017-07-22gnu: font-gnu-unifont: Update to 10.0.05.•••* gnu/packages/fonts.scm (font-gnu-unifont): Update to 10.0.05. Tobias Geerinckx-Rice
2017-07-22gnu: nano: Update to 2.8.6.•••* gnu/packages/nano.scm (nano): Update to 2.8.6. Tobias Geerinckx-Rice
2017-07-22gnu: acct: Update to 6.6.4.•••* gnu/packages/acct.scm (acct): Update to 6.6.4. Tobias Geerinckx-Rice
2017-07-22gnu: Add conda.•••* gnu/packages/package-management.scm (conda): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Muriithi Frederick Muriuki
2017-07-22gnu: Add python-conda.•••* gnu/packages/package-management.scm (python-conda, python2-conda): New variables. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Muriithi Frederick Muriuki
2017-07-22gnu: Add python-anaconda-client.•••* gnu/packages/package-management.scm (python-anaconda-client, python2-anaconda-client): New variables. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Muriithi Frederick Muriuki
2017-07-22gnu: Add python-clyent.•••* gnu/packages/python.scm (python-clyent, python2-clyent): New variables. Muriithi Frederick Muriuki
2017-07-22gnu: Update python-pytz to 2017.2.•••* gnu/packages/python.scm (python-pytz, python2-pytz): Update to 2017.2. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Muriithi Frederick Muriuki
2017-07-22gnu: man-pages: Update to 4.12.•••* gnu/packages/man.scm (man-pages): Update to 4.12. Tobias Geerinckx-Rice
2017-07-21gnu: tint2: Update to 0.14.6.•••* gnu/packages/xdisorg.scm (tint2): Update to 0.14.6. Eric Bavier
2017-07-21gnu: icedtea@3: Update to 3.5.0 [security fixes].•••Fixes CVE-2017-{10053,10067,10074,10074,10078,10081,10087,10089,10090,10096, 10101,10102,10107,10108,10109,10110,10111,10115,10116,10118,10135,10176,10193, 10198}. * gnu/packages/java.scm (icedtea-8): Update to 3.5.0. Leo Famulari
2017-07-21services: cuirass: Add fallback parameter.•••* gnu/services/cuirass.scm (<cuirass-configuration>)[fallback?]: New field. (cuirass-shepherd-service): Take it into account. * doc/guix.texi (Continuous Integration): Document it. Mathieu Othacehe
2017-07-21gnu: vim: Update to 8.0.0727 [fixes CVE-2017-11109].•••* gnu/packages/vim.scm (vim): Update to 8.0.0727. (vim-full)[source]: Add field and hold back at version 8.0.0600. Leo Famulari
2017-07-21gnu: mysql: Update to 5.7.19.•••* gnu/packages/databases.scm (mysql): Update to 5.7.19. Leo Famulari
2017-07-21publish: Make the cache eviction policy less aggressive.•••Suggested by Mark H Weaver <mhw@netris.org>. * guix/scripts/publish.scm (nar-expiration-time): New procedure. (render-narinfo/cached): Use it as the #:entry-expiration passed to 'maybe-remove-expired-cache-entries'. Ludovic Courtès
2017-07-21publish: Avoid 'valid-path?' RPC for non-existent items.•••* guix/scripts/publish.scm (render-narinfo/cached): Call 'file-exists?' before calling 'valid-path?'. This makes the 404 path slightly faster. Ludovic Courtès
2017-07-21store: Rewrite 'store-path-hash-part' to not use regexps.•••* guix/store.scm (store-path-hash-part): Rewrite without using a regexp. This speeds up 'guix substitute'. Ludovic Courtès
2017-07-21publish: Remove 'regexp-exec' call from the hot path.•••* guix/scripts/publish.scm (extract-narinfo-hash): Rewrite without resorting to regexps. Ludovic Courtès
2017-07-21base32: Export the base32 charsets.•••* guix/base32.scm (%nix-base32-charset, %rfc4648-base32-charset): New variables. Ludovic Courtès
2017-07-21substitute: Avoid repeated calls to 'length'.•••* guix/scripts/substitute.scm (fetch-narinfos)[update-progress!]: Move 'length' call outside of lambda. Ludovic Courtès
2017-07-21substitute: Optimize hash-part-to-path conversion on non-200 responses.•••Previously this operation was linear in the number of requests and involved costly calls to 'string-contains'. * guix/scripts/substitute.scm (fetch-narinfos)[hash-part->path]: New procedure. [handle-narinfo-response]: Use it for caching when CODE is not 200. Ludovic Courtès
2017-07-21gnu: libpsl: Update to 0.18.0.•••* gnu/packages/web.scm (libpsl): Update to 0.18.0. [native-inputs]: Add pkg-config. [inputs]: Replace icu4c with libidn2; add libunistring. Tobias Geerinckx-Rice
2017-07-21gnu: borg: Update to 1.0.11.•••* gnu/packages/backup.scm (borg): Update to 1.0.11. Leo Famulari
2017-07-20gnu: bitcoin-core: Actually build the graphical client.•••* gnu/packages/finance.scm (bitcoin-core)[inputs]: Replace qtbase with qt. Leo Famulari
2017-07-20gnu: heimdal: Fix CVE-2017-{6594,11103}.•••* gnu/packages/patches/heimdal-CVE-2017-6594.patch, gnu/packages/patches/heimdal-CVE-2017-11103.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/kerberos.scm (heimdal)[source]: Use them. Alex Vong
2017-07-20gnu: Add bmon.•••* gnu/packages/networking.scm (bmon): New variable. Arun Isaac
2017-07-20doc: Show the "git clone" command.•••Suggested by Joshua Branson <jbranso91@gmail.com>. * doc/contributing.texi (Building from Git): Add "git clone" command. Ludovic Courtès
2017-07-20gexp: Slightly improve error reporting for 'local-file'.•••Reported by Ricardo Wurmus. * guix/gexp.scm (local-file): Define using 'syntax-case' instead of 'syntax-rules'. Explicitly handle the zero-argument case and the use-as-an-identifier case. Ludovic Courtès
2017-07-20gnu: texlive-latex-mdwtools: Fix syntax error in description.•••* gnu/packages/tex.scm (texlive-latex-mdwtools)[description]: Fix texinfo syntax error. Ricardo Wurmus
2017-07-20gnu: texlive-latex-environ: Fix invalid texinfo markup.•••* gnu/packages/tex.scm (texlive-latex-environ)[description]: Fix texinfo syntax errors. Ricardo Wurmus
2017-07-20gnu: Add mksh.•••* gnu/packages/shells.scm (mksh): New variable. Arun Isaac
2017-07-20licenses: Add MirOS license.•••* guix/licenses.scm (miros): New variable. Arun Isaac
2017-07-20guix package: '-l' correctly handles zero-generation profiles.•••* guix/scripts/package.scm (process-query) <'list-generations>: Properly handle the case where 'profile-generations' returns the empty list. Ludovic Courtès
2017-07-20guix package: Trim trailing slashes from the profile name.•••Fixes <https://bugs.gnu.org/25762>. Reported by Ricardo Wurmus <rekado@elephly.net>. * guix/scripts/package.scm (canonicalize-profile): Trim trailing slashes from PROFILE. Ludovic Courtès
2017-07-20doc: Discuss when to run a GC.•••* doc/guix.texi (Invoking guix gc): Add a paragraph on when to run a GC. Ludovic Courtès
2017-07-20gnu: Remove a left-over patch.•••This is a followup to commit 426b0b898f70a58133d80779980f163a5761686e. * gnu/packages/patches/pcre-CVE-2017-7186.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Leo Famulari
2017-07-20gnu: pcre: Update replacement to 8.41 [fixes CVE-2017-{7244,7245,7246}].•••* gnu/packages/pcre.scm (pcre)[replacement]: Update to pcre-8.41. (pcre/fixed): Replace with ... (pcre-8.41): ... new variable. Leo Famulari
2017-07-20profiles: Remove workaround for an old Guile 'scandir' bug.•••* guix/profiles.scm (generation-numbers)[scandir]: Remove. Ludovic Courtès
2017-07-20tests: Use 'virtual-machine' records instead of monadic procedures.•••* gnu/tests/base.scm (%test-basic-os): Use 'let*' instead of 'mlet*' and 'virtual-machine' instead of 'system-qemu-image/shared-store-script'. (run-mcron-test): Likewise. (run-nss-mdns-test): Likewise. * gnu/tests/dict.scm (run-dicod-test): Likewise. * gnu/tests/mail.scm (run-opensmtpd-test): Likewise. (run-exim-test): Likewise. * gnu/tests/messaging.scm (run-xmpp-test): Likewise. * gnu/tests/networking.scm (run-inetd-test): Likewise. * gnu/tests/nfs.scm (run-nfs-test): Likewise. * gnu/tests/ssh.scm (run-ssh-test): Likewise. * gnu/tests/web.scm (run-nginx-test): Likewise. Ludovic Courtès
2017-07-20vm: Add a <virtual-machine> type and associated gexp compiler.•••* gnu/system/vm.scm (system-qemu-image/shared-store-script): Add #:options parameter and honor it. (<virtual-machine>): New record type. (virtual-machine): New macro. (port-forwardings->qemu-options, virtual-machine-compiler): New procedures. Ludovic Courtès
2017-07-20gnu: Add premake4.•••* gnu/packages/build-tools.scm (premake4): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Oleg Pykhalov
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