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Fixes build failures on Hydra. Reported by Mark H Weaver in
<https://lists.gnu.org/archive/html/guix-devel/2017-12/msg00391.html>.
* gnu/packages/gtk.scm (girara)[arguments]: Set CK_DEFAULT_TIMEOUT before
running tests.
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This fixes the security issues described at
https://www.ruby-lang.org/en/news/2018/02/17/multiple-vulnerabilities-in-
rubygems/
* gnu/packages/patches/ruby-rubygems-276-for-ruby24.patch: New file.
* gnu/packages/ruby.scm (ruby-2.4.3)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
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* gnu/packages/haskell.scm (ghc-mtl)[arguments]: Explain why we need to allow
a newer version of the transformers package.
[inputs]: Remove ghc-transformers.
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* gnu/packages/bioinformatics.scm (vsearch): Update to 2.7.1.
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* gnu/services/xorg.scm (xinitrc): Import (ice-9 rdelim).
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* gnu/packages/version-control.scm (git): Update to 2.16.2.
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* gnu/packages/maths.scm (glpk): Update to 4.65.
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* gnu/packages/xorg.scm (xf86-video-vesa): Update to 2.4.0.
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* gnu/packages/games.scm (colobot): New variable.
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Fixes <https://bugs.gnu.org/30436>.
* gnu/packages/scheme.scm (bigloo)[source]: Fix hash.
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* gnu/packages/game-development.scm (tiled): Update to 1.1.2.
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* gnu/packages/video.scm (mpv): Update to 0.28.2.
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* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.7.4.
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* gnu/packages/xfce.scm (ristretto): Update to 0.8.2.
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* gnu/packages/xiph.scm (opusfile): Update to 0.10.
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* gnu/packages/erlang.scm (erlang)[arguments]: Substitute INVOKE for
SYSTEM*, don't use %OUTPUTS, and end phases with #t.
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* gnu/packages/erlang.scm (erlang): Update to 20.2.3.
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* gnu/packages/gkrellm.scm (gkrellm): Update to 2.3.10.
[arguments]: Remove X11_LIBS override.
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* gnu/packages/gnustep.scm (wmbattery, wmclock, wmcpuload)[home-pages]:
Use new dockapps.net domain.
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* gnu/packages/gnustep.scm (windowmaker)[arguments]: Don't use %OUTPUT.
End phases with #t.
(wmbattery, wmclock)[arguments]: Substitute INVOKE for SYSTEM*. End
phases with #t.
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* gnu/packages/gnustep.scm (wmcpuload): Update to 1.1.1.
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* gnu/packages/gnustep.scm (wmbattery): Update to 2.51.
[source]: Remove upstreamed bugfix snippet.
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* gnu/packages/acl.scm (acl)[home-page]: Use HTTPS.
* gnu/packages/admin.scm (dmidecode)[home-page]: Likewise.
* gnu/packages/attr.scm (attr)[home-page]: Likewise.
* gnu/packages/audio.scm (lash)[home-page]: Likewise.
* gnu/packages/avr.scm (avr-libc)[home-page]: Likewise.
* gnu/packages/backup.scm (rdiff-backup, libchop)[home-page]: Likewise.
* gnu/packages/compression.scm (fastjar, lzip, lziprecover, atool)
(lunzip, clzip, lzlib, plzip)[home-page]: Likewise.
* gnu/packages/emacs.scm (geiser, bbdb, m17n-lib, m17n-lib)[home-page]:
Likewise.
* gnu/packages/flashing-tools.scm (avrdude)[home-page]: Likewise.
* gnu/packages/fontutils.scm (libotf)[home-page]: Likewise.
* gnu/packages/game-development.scm (gzochi)[home-page]: Likewise.
* gnu/packages/games.scm (enigma)[home-page]: Likewise.
* gnu/packages/gsasl.scm (libntlm)[home-page]: Likewise.
* gnu/packages/gtk.scm (guile-cairo)[home-page]: Likewise.
* gnu/packages/guile.scm (guile-reader, guile-lib, guile-json)
(guile-redis, g-wrap)[home-page]: Likewise.
* gnu/packages/libunwind.scm (libunwind)[home-page]: Likewise.
* gnu/packages/lout.scm (lout)[home-page]: Likewise.
* gnu/packages/mpd.scm (sonata)[home-page]: Likewise.
* gnu/packages/networking.scm (quagga)[home-page]: Likewise.
* gnu/packages/ratpoison.scm (ratpoison)[home-page]: Likewise.
* gnu/packages/skribilo.scm (skribilo)[home-page]: Likewise.
* gnu/packages/telephony.scm (exosip)[home-page]: Likewise.
* gnu/packages/texinfo.scm (texi2html)[home-page]: Likewise.
* gnu/packages/xdisorg.scm (xbindkeys)[home-page]: Likewise.
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* gnu/packages/compression.scm (plzip): Update to 1.7.
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* gnu/packages/compression.scm (lzlib): Update to 1.10.
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* gnu/packages/compression.scm (clzip): Update to 1.10.
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* gnu/packages/compression.scm (lziprecover): Update to 1.20.
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* gnu/packages/compression.scm (pbzip2): Update to 1.1.13.
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* gnu/packages/compression.scm (lzop)[home-page]: Use HTTPS.
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* gnu/packages/compression.scm (lzop): Update to 1.04.
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Reported by <pkill9@runbox.com>.
Fixes <https://bugs.gnu.org/30470>.
* guix/import/utils.scm (alist->package): Check whether 'license' is
false and set the 'license' field to #f in this case.
* tests/import-utils.scm ("alist->package with false license"): New
test.
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Reported by Pjotr Prins <pjotr.public12@thebird.nl>.
* gnu/packages/ldc.scm (ldc-bootstrap)[properties]: New field.
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See the advisories at
<https://git.savannah.gnu.org/cgit/quagga.git/tree/doc/security?h=quagga-1.2.3>
for more information about the security-related bugs fixed in this
release.
* gnu/packages/networking.scm (quagga): Update to 1.2.3.
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* gnu/packages/python.scm (python-botocore): Update to 1.8.43.
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Reported by Konrad Hinsen <konrad.hinsen@fastmail.net>.
* guix/scripts/pack.scm (show-help): Adjust --manifest documentation.
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* gnu/packages/kde.scm(kholidays): New variable.
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* gnu/packages/java.scm (java-fasterxml-jackson-dataformat-xml): Update
to 2.9.4.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/java.scm (java-fasterxml-jackson-dataformat-yaml): Update
to 2.9.4.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/java.scm (java-fasterxml-jackson-modules-base-jaxb):
Update to 2.9.4.
Signed-off-by: Leo Famulari <leo@famulari.name>
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CVE-{2017-17485, 2018-5968}].
* gnu/packages/java.scm (java-fasterxml-jackson-databind): Update to 2.9.4.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/java.scm (java-fasterxml-jackson-core): Update to 2.9.4.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/java.scm (java-fasterxml-jackson-annotations): Update to 2.9.4.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.18.
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* gnu/packages/python-web.scm (python-elasticsearch, python2-elasticsearch):
Update to 6.1.1.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/python.scm (bpython, bpython2): New variables.
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* gnu/packages/terminals.scm (python-curtsies, python2-curtsies): New
variables.
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* gnu/packages/terminals.scm (python-blessings, python2-blessings): New
variables.
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* gnu/packages/terminals.scm (python-pyte, python2-pyte): New variables.
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* gnu/packages/irc.scm (irssi): Update to 1.1.1.
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* guix/build/union.scm (union-build): Wrap collisions with newlines.
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