Age | Commit message (Collapse) | Author |
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* gnu/packages/bioinformatics.scm (scregseg): Update to 0.1.3.
[source]: Simplify snippet.
[build-system]: Use pyproject-build-system.
[arguments]: Add phases 'set-numba-cache-dir and 'build-extensions; enable
tests.
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* gnu/packages/bioinformatics.scm (python-doubletdetection): New variable.
Co-authored-by: Navid Afkhami <navid.afkhami@mdc-berlin.de>
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* gnu/packages/graph.scm (python-vtraag-louvain): New variable.
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* gnu/packages/bioinformatics.scm (python-phenograph): New variable.
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* gnu/packages/bioinformatics.scm (louvain): New variable.
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* gnu/packages/machine-learning.scm (python-hmmlearn): Update to 0.2.8.
[arguments]: Use gexp; simplify 'check phase.
[propagated-inputs]: Remove python-cython.
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* gnu/packages/text-editors.scm (xnedit): New variable.
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
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* gnu/packages/lesstif.scm (motif): New variable.
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
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* gnu/packages/wm.scm (icewm)[inputs]: Add glib.
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* gnu/packages/wm.scm (icewm): New variable.
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
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* gnu/packages/wxwidgets.scm (perl-alien-wxwidgets): New variable.
Co-authored-by: Malte Frank Gerdes <malte.f.gerdes@gmail.com>
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* gnu/packages/perl.scm (perl-growl-gntp): New variable.
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* gnu/packages/networking.scm (perl-net-bonjour): New variable.
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* gnu/packages/golang.scm (go-github-com-spf13-pflag)[source]: Add
snippet to fix test suite with newer versions of go.
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* gnu/packages/ncdu.scm (ncdu): Update to 2.2.2.
[native-inputs]: Switch from zig-0.9 to zig-0.10.
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* gnu/packages/zig.scm (zig-0.10): New variable.
(zig-0.9): Rename from zig. Inherit from zig-0.10.
(zig): Define as zig-0.10.
* gnu/packages/ncdu.scm (ncdu)[native-inputs]: Use zig-0.9.
* gnu/packages/zig-xyz.scm (zig-zls)[inputs]: Use zig-0.9.
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* gnu/packages/gcc.scm (gccgo-12): New variable.
(make-gccgo)[arguments]: Adapt custom 'remove-tool-reference-from-libgo
to changes in the source.
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* gnu/packages/lisp-xyz.scm (sbcl-nfiles): Update to 1.1.0.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
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* gnu/packages/radio.scm (sdrangel): Update to 7.8.6.
[inputs]: Add hidapi.
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* gnu/packages/radio.scm (urh): Update to 2.9.4.
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* gnu/packages/radio.scm (qdmr): Update to 0.11.2.
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Fixes <https://issues.guix.gnu.org/61121>.
* gnu/packages/julia.scm (julia)[arguments]: Add a phase to have Julia
use the SSL_CERT_FILE search path.
[native-search-paths]: Add SSL_CERT_FILE.
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* gnu/services/base.scm (make-greetd-terminal-configuration-file): Add missing
'general' section to configuration file.
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* gnu/packages/freedesktop.scm (basu): Propagate libcap so that pkg-config can
find basu's dependency.
Signed-off-by: Jelle Licht <jlicht@fsfe.org>
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* gnu/packages/package-management.scm (rpm) [inputs]: Add zstd.
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* gnu/packages/kde-frameworks.scm (kio): Fix indentation.
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* gnu/packages/kde-frameworks.scm (kio) [phases]: Skip the
kiowidgets-kdirlistertest test in the check phase.
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* gnu/packages/crates-io.scm (tree-sitter-grammar): New variable.
(tree-sitter-grammar-html): New variable.
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* gnu/packages/tree-sitter.scm (tree-sitter-cli): New variable.
Signed-off-by: Andrew Tropin <andrew@trop.in>
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* gnu/packages/crates-io.scm (rust-smallbitvec-2): New variable.
Signed-off-by: Andrew Tropin <andrew@trop.in>
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* gnu/packages/crates-io.scm (rust-html-escape): New variable.
Signed-off-by: Andrew Tropin <andrew@trop.in>
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* gnu/packages/tree-sitter.scm (tree-sitter): Add gexps, remove trailing #t,
reformat code.
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* gnu/packages/tree-sitter.scm (tree-sitter): Update to 0.20.7.
Signed-off-by: Andrew Tropin <andrew@trop.in>
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* gnu/packages/text-editors.scm (tree-sitter): Move to ...
* gnu/packages/tree-sitter.scm: ... here, a new module.
* gnu/packages/vim.scm: Use (gnu packages tree-sitter).
* gnu/packages/emacs.scm: Use (gnu packages tree-sitter).
* gnu/local.mk (GNU_SYSTEM_MODULES): Register tree-sitter.scm new module.
Signed-off-by: Andrew Tropin <andrew@trop.in>
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* gnu/packages/golang.scm (go-std-1.20): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/golang.scm (go-1.20): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/admin.scm (greetd)[inputs]: Use new-style inputs.
Signed-off-by: Jelle Licht <jlicht@fsfe.org>
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* gnu/packages/admin.scm (greetd): Update to 0.9.0.
Signed-off-by: Jelle Licht <jlicht@fsfe.org>
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* gnu/packages/crates-io.scm (rust-nix-0.26): New variable.
(rust-nix-0.24): Inherit from above.
Signed-off-by: Jelle Licht <jlicht@fsfe.org>
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* gnu/packages/bioinformatics.scm (python-scrublet): New variable.
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* gnu/packages/enlightenment.scm (efl)[propagated-inputs]: Use luajit or
lua based on the system's luajit support.
[arguments]: Adjust configure-flags to use the correct lua.
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Table entry @item nodes cannot span multiple lines.
* gnu/services/lightdm.scm
(lightdm-gtk-greeter-configuration): Fix cursor-theme-size description.
* doc/guix.texi (lightdm-service-type): Sync with source.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
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* gnu/services/configuration.scm
(generate-documentation): Format a list of packages by their names.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
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* gnu/packages/qt.scm (qtdeclarative) [phases]: Mark the
tst_qquickfolderdialogimpl test as skipped in the check phase.
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Deprecates %facebook-host-aliases in favour of using
hosts-service-type service extensions.
* gnu/services/networking.scm
(block-facebook-hosts-service-type): New variable.
(%facebook-host-aliases): Deprecate variable.
* doc/guix.texi: Document it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/system.scm (operating-system-hosts-file): Deprecate procedure.
(warn-hosts-file-field-deprecation): New procedure, helper for
deprecated variable.
(operating-system)[hosts-file]: Use helper to warn deprecated field.
(local-host-aliases): Mark as deprecated.
(local-host-entries): New procedure.
(operating-system-default-essential-services,
hurd-default-essential-services): Use hosts-service-type. Use
'%operating-system-hosts-file' and 'local-host-entries'.
(default-/etc/hosts): Remove procedure.
(operating-system-etc-service): Remove hosts file.
* doc/guix.texi (operating-system Reference)
(Networking Services) (Virtualization Services): Rewrite documentation
entries to use hosts-service-type.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/services/base.scm (<host>): New record type.
(host): New procedure.
(hosts-service-type): New variable.
* doc/guix.texi (Service Reference): Document it.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/valgrind.scm (valgrind-3.20): Delete variable.
(valgrind/interactive): Update to 3.20.0.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/backup.scm (libchop)[source]: Adjust snippet to work
around build error in Gnulib's <stdio.h>.
[arguments]: Remove 'skip-test' phase and add 'adjust-test' phase.
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* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.305.
(linux-libre-4.14-pristine-source): Update hash.
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