Age | Commit message (Collapse) | Author |
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* emacs/guix-main.scm (generation-package-specifications): Rename to...
(profile-package-specifications): ... this. Take a single 'profile'
argument.
(generation-difference): Rename to...
(profile-difference): ... this. Take profiles as arguments.
(package/output-sexps): Adjust accordingly.
* emacs/guix-ui-generation.el (guix-generation-list-profiles-to-compare):
New procedure.
(guix-generation-list-show-added-packages)
(guix-generation-list-show-removed-packages): Use it.
* emacs/guix-messages.el (guix-messages): Replace 'generation-diff' with
'profile-diff'.
(guix-message-outputs-by-diff): Adjust accordingly.
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For a usual profile, packages are placed in a profile directory itself,
but for a system profile, packages are placed in 'profile'
sub-directory. So we need to do some special cases for system profiles
to find packages there as well.
* emacs/guix-base.el (guix-packages-profile): New procedure.
(guix-manifest-file): Use it. Add optional 'system?' argument.
* emacs/guix-ui-generation.el (guix-system-generation?)
(guix-generation-current-packages-profile): New procedures.
(guix-generation-packages, guix-generation-insert-packages): Remove
'generation' argument.
(guix-generation-packages-buffer): Add optional 'system?' argument.
(guix-profile-generation-manifest-file)
(guix-profile-generation-packages-buffer): Adjust accordingly.
* emacs/guix-main.scm (generation-package-specifications+paths): Rename to...
(profile->specifications+paths): ... this. Use a single 'profile' argument.
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* emacs/guix-profiles.el (guix-system-profile): New variable.
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* guix/scripts/system.scm (previous-grub-entries)
(display-system-generation): Use accessors instead of matching
<boot-parameters>.
(boot-parameters, boot-parameters?, boot-parameters-label)
(boot-parameters-root-device, boot-parameters-kernel)
(boot-parameters-kernel-arguments, read-boot-parameters): Move to...
* gnu/system.scm: ... here. Export them.
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* gnu/packages/python.scm (python-hy, python2-hy): New variables.
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* gnu/packages/python.scm (python-rply, python2-rply): New variables.
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* gnu/packages/python.scm (python-astor, python2-astor): New variables.
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* gnu/packages/python.scm (python-clint, python2-clint): New variables.
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* gnu/packages.scm (python-args, python2-args): New variables.
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* gnu/packages/calendar.scm (khal): New variable.
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* gnu/packages/python.scm (python-urwid)[arguments]: Add
'disable-failing-test' phase.
[source]: Use pypi-uri.
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* gnu/packages/python.scm (python-tzlocal): Update to 1.2.
[source]: Use pypi-uri.
[arguments]: Remove the custom 'unpack phase.
[native-inputs]: Remove unzip, python-setuptools.
[propagated-inputs]: Add python-pytz.
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* gnu/packages/python.scm (python-sphinxcontrib-newsfeed): New variable.
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* gnu/packages/python.scm (python-icalendar): New variable.
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* gnu/packages/dav.scm (vdirsyncer): New variable.
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* gnu/packages/dav.scm (radicale): New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
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* gnu/packages/python.scm (python-pytest-xprocess): New variable.
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* gnu/packages/python.scm (python-wsgi-intercept): New variable.
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* gnu/packages/python.scm (python-pytest-localserver): New variable.
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* gnu/packages/python.scm (python-pytest-cache): New variable.
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* gnu/packages/python.scm (python-execnet): New variable.
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* gnu/packages/python.scm (python-apipkg): New variable.
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* gnu/packages/python.scm (python-click-log): New variable.
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* gnu/packages/python.scm (python-click-threading): New variable.
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* gnu/packages/python.scm (python-requests-toolbelt): New variable.
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* gnu/packages/python.scm (python-atomicwrites): New variable.
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* gnu/packages/gnome.scm (glade): Update to 3.18.5.
[arguments]: Disable tests; add "fix-docbook" phase.
[inputs]: Replace "gtk+-2" with "gtk+".
[native-inputs]: Add "itstool", "libxslt", "docbook-xml", "docbook-xsl";
replace "python" with "python-2".
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* gnu/packages/ssh.scm (openssh): Update to 7.1p2.
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This reverts commit 6d139e53b596ca154800d154b37fcd22741c629c.
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* gnu/packages/ssh.scm (openssh): Update to 7.1p2.
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* gnu/packages/docker.scm (docker-compose): New variable.
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* gnu/packages/docker.scm (python-dockerpty): New variable.
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* gnu/packages/docker.scm: New file.
* Makefile.am (GNU_SYSTEM_MODULES): Add it.
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* gnu/packages/python.scm (python-websocket-client): New variable.
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* gnu/packages/python.scm (python-texttable, python2-texttable): New
variables.
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* gnu/packages/python.scm (python-jsonschema): Update to 2.5.1.
[inputs]: Add python-vcversioner.
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* gnu/packages/python.scm (python-vcversioner, python2-vcversioner): New
variables.
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* gnu/packages/python.scm (python-requests-2.7): New variable.
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* gnu/packages/bioinformatics.scm (r-go-db)[propagated-inputs]: Add
"r-annotationdbi".
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* gnu/packages/statistics.scm (r-sparsem)[inputs]: Add "gfortran".
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* gnu/packages/bioinformatics.scm (bowtie): Update to 2.2.6.
[source]: Remove patch; do not set CC and CPP variables.
[inputs]: Add "tbb".
[arguments]: Pass "prefix" and "WITH_TBB" make flags; remove custom
"install" phase.
* gnu/packages/patches/bowtie-fix-makefile.patch: Remove file.
* gnu-system.am (dist_patch_DATA): Remove patch file.
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* gnu/packages/gnupg.scm (gnupg)[inputs]: Add sqlite.
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* guix/import/gem.scm (gem->guix-package): Use 'beautify-description'.
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* guix/import/cran.scm (beautify-description): Move from here...
* guix/import/utils.scm: ... to here.
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Reported by Ludovic Courtès <ludo@gnu.org> on #guix.
This fixes a regression introduced in commit 7171d824.
'insert-text-button' procedure does not allow to override a button face,
so a specialized button type should be used instead.
* emacs/guix-ui-package.el (guix-package-heading): New button type.
(guix-package-info-insert-heading): Use it.
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* gnu/packages/bioinformatics.scm (orfm): Update to 0.5.3.
[native-inputs]: Add inputs required for tests.
[description]: Add commas.
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* gnu/packages/ruby.scm (ruby-bio-commandeer): New variable.
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* gnu/packages/ruby.scm (ruby-systemu): New variable.
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* build-aux/hydra/guix.scm (tarball-package): Inherit from 'guix-devel'
rather than 'guix'. Pass #:phases to 'dist-package'.
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* guix/build-system/gnu.scm (dist-package): Add #:phases parameter and
honor it.
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