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2022-05-28guix: Upgrade to Bioconductor 3.15.Ricardo Wurmus
* guix/build-system/r.scm (bioconductor-uri): Bump Bioconductor version to 3.15. * guix/import/cran.scm (%bioconductor-version): Same.
2022-05-28gnu: apache-arrow: Update to 8.0.0.Ricardo Wurmus
* gnu/packages/databases.scm (apache-arrow): Update to 8.0.0.
2022-05-28gnu: Add r-rcppml.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcppml): New variable.
2022-05-28gnu: Add r-dixontest.Ricardo Wurmus
* gnu/packages/cran.scm (r-dixontest): New variable.
2022-05-28gnu: r-biostrings: Patch for R 4.2.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biostrings)[arguments]: Add build phase 'patch-for-R-4.2.0.
2022-05-28gnu: r-rcurl: Update to 1.98-1.6.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rcurl): Update to 1.98-1.6. [source]: Take from CRAN. [arguments]: Remove trailing #T from build phase. [native-inputs]: Add libxml2. [inputs]: Use new input list style.
2022-05-28gnu: nlopt: Update to 2.7.1.Ricardo Wurmus
* gnu/packages/maths.scm (nlopt): Update to 2.7.1. [source]: Fetch from git. [build-system]: Use cmake-build-system. [arguments]: Adjuts 'set-libnlopt-file-name phase. [inputs]: Replace guile-2.0 with guile-3.0; add octave and python. [native-inputs]: Add swig.
2022-05-28gnu: r-binom: Update to 1.1-1.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-binom): Update to 1.1-1.1.
2022-05-28gnu: r-desctools: Update to 0.99.45.Ricardo Wurmus
* gnu/packages/statistics.scm (r-desctools): Update to 0.99.45. [propagated-inputs]: Add r-httr and r-readxl.
2022-05-28gnu: r-datasaurus: Update to 0.1.6.Ricardo Wurmus
* gnu/packages/statistics.scm (r-datasaurus): Update to 0.1.6.
2022-05-28gnu: r-logspline: Update to 2.1.17.Ricardo Wurmus
* gnu/packages/statistics.scm (r-logspline): Update to 2.1.17.
2022-05-28gnu: r-clubsandwich: Update to 0.5.6.Ricardo Wurmus
* gnu/packages/statistics.scm (r-clubsandwich): Update to 0.5.6.
2022-05-28gnu: r-tclust: Update to 1.5-1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-tclust): Update to 1.5-1.
2022-05-28gnu: r-car: Update to 3.0-13.Ricardo Wurmus
* gnu/packages/statistics.scm (r-car): Update to 3.0-13.
2022-05-28gnu: r-nloptr: Update to 2.0.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-nloptr): Update to 2.0.3.
2022-05-28gnu: r-quantreg: Update to 5.93.Ricardo Wurmus
* gnu/packages/statistics.scm (r-quantreg): Update to 5.93. [propagated-inputs]: Add r-mass and r-survival. [native-inputs]: Add r-r-rsp. [arguments]: Add phase 'set-HOME.
2022-05-28gnu: r-rrcov: Update to 1.7-0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rrcov): Update to 1.7-0.
2022-05-28gnu: r-pcapp: Update to 2.0-1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-pcapp): Update to 2.0-1.
2022-05-28gnu: r-mclust: Update to 5.4.10.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mclust): Update to 5.4.10.
2022-05-28gnu: r-randomforest: Update to 4.7-1.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-randomforest): Update to 4.7-1.1.
2022-05-28gnu: r-lars: Update to 1.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-lars): Update to 1.3.
2022-05-28gnu: r-gplots: Update to 3.1.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-gplots): Update to 3.1.3.
2022-05-28gnu: r-gdata: Update to 2.18.0.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-gdata): Update to 2.18.0.1.
2022-05-28gnu: r-gtools: Update to 3.9.2.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-gtools): Update to 3.9.2.1.
2022-05-28gnu: r-hmisc: Update to 4.7-0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-hmisc): Update to 4.7-0.
2022-05-28gnu: r-matrixstats: Update to 0.62.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-matrixstats): Update to 0.62.0.
2022-05-28gnu: r-bigmemory: Update to 4.6.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-bigmemory): Update to 4.6.1. [propagated-inputs]: Add r-uuid. [inputs]: Add util-linux:lib.
2022-05-28gnu: r-rtsne: Update to 0.16.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rtsne): Update to 0.16.
2022-05-28gnu: r-glmnet: Update to 4.1-4.Ricardo Wurmus
* gnu/packages/statistics.scm (r-glmnet): Update to 4.1-4.
2022-05-28gnu: r-dt: Update to 0.23.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dt): Update to 0.23.
2022-05-28gnu: r-segmented: Update to 1.5-0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-segmented): Update to 1.5-0.
2022-05-28gnu: r-rsqlite: Update to 2.2.14.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.2.14.
2022-05-28gnu: r-rmarkdown: Update to 2.14.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.14.
2022-05-28gnu: r-rcpparmadillo: Update to 0.11.1.1.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.11.1.1.0.
2022-05-28gnu: r-httr: Update to 1.4.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-httr): Update to 1.4.3.
2022-05-28gnu: r-openssl: Update to 2.0.2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-openssl): Update to 2.0.2.
2022-05-28gnu: r-roxygen2: Update to 7.2.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-roxygen2): Update to 7.2.0. [propagated-inputs]: Add r-cli and r-withr.
2022-05-28gnu: r-checkmate: Update to 2.1.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-checkmate): Update to 2.1.0. [native-inputs]: Add r-knitr.
2022-05-28gnu: r-ade4: Update to 1.7-19.Ricardo Wurmus
* gnu/packages/statistics.scm (r-ade4): Update to 1.7-19.
2022-05-28gnu: r-dplyr: Update to 1.0.9.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dplyr): Update to 1.0.9.
2022-05-28gnu: r-tibble: Update to 3.1.7.Ricardo Wurmus
* gnu/packages/statistics.scm (r-tibble): Update to 3.1.7.
2022-05-28gnu: r-testthat: Update to 3.1.4.Ricardo Wurmus
* gnu/packages/statistics.scm (r-testthat): Update to 3.1.4.
2022-05-28gnu: r-knitr: Update to 1.39.Ricardo Wurmus
* gnu/packages/statistics.scm (r-knitr): Update to 1.39.
2022-05-28gnu: r-ggplot2: Update to 3.3.6.Ricardo Wurmus
* gnu/packages/statistics.scm (r-ggplot2): Update to 3.3.6.
2022-05-28gnu: r-dichromat: Update to 2.0-0.1.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dichromat): Update to 2.0-0.1.
2022-05-28gnu: r-mass: Update to 7.3-57.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mass): Update to 7.3-57.
2022-05-28gnu: r-mlearning: Update to 1.1.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-mlearning): Update to 1.1.1.
2022-05-28gnu: r-zoolog: Update to 1.0.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-zoolog): Update to 1.0.1.
2022-05-28gnu: r-rfigshare: Update to 0.3.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-rfigshare): Update to 0.3.8. [propagated-inputs]: Remove r-plyr. [native-inputs]: Add r-knitr.
2022-05-28gnu: r-keras: Update to 2.9.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-keras): Update to 2.9.0.
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