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2016-03-30gnu: r-genomicfeatures: Update to 1.22.13.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.22.13.
2016-03-30gnu: r-rtracklayer: Update to 1.30.4.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.30.4.
2016-03-30gnu: r-genomicalignments: Update to 1.6.3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.6.3.
2016-03-30gnu: r-summarizedexperiment: Update to 1.0.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.0.2.
2016-03-30gnu: r-biostrings: Update to 2.38.4.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.38.4.
2016-03-30gnu: r-genomicranges: Update to 1.22.4.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.22.4.
2016-03-30gnu: r-genomeinfodb: Update to 1.6.3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.6.3.
2016-03-30gnu: libpaper: Update source url.Efraim Flashner
Reported by shanemikel_ on irc. * gnu/packages/ghostscript.scm (libpaper)[source]: Update source url to download from Fedora. [home-page]: Use https.
2016-03-29gnu: guix: Ignore the user's 'GUILE_LOAD_COMPILED_PATH'.Ludovic Courtès
Reported by <rain1@openmailbox.org>. * gnu/packages/package-management.scm (guix-0.10.0)[arguments]: Use '= instead of 'prefix in call to 'wrap-program'.
2016-03-29gnu: Add libzapojit.Rene Saavedra
* gnu/packages/gnome.scm (libzapojit): New variable. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-03-29gnu: khal: Disable failing tests.Leo Famulari
* gnu/packages/calendar.scm (khal)[arguments]: Disable failing tests in 'disable-tests' phase.
2016-03-29gnu: gst-plugins-good: Update to 1.8.0.Efraim Flashner
* gnu/packages/gstreamer.scm (gst-plugins-good): Update to 1.8.0. [home-page]: Use https. [arguments]: Disable tests that fail non-deterministically.
2016-03-29gnu: gst-plugins-ugly: Update to 1.8.0.Efraim Flashner
* gnu/packages/gstreamer.scm (gst-plugins-ugly): Update to 1.8.0. [home-page]: Use https.
2016-03-29gnu: python-gst: Update to 1.8.0.Efraim Flashner
* gnu/packages/gstreamer.scm (python-gst, python2-gst): Update to 1.8.0. [home-page]: Use https.
2016-03-29gnu: gst-plugins-base: Update to 1.8.0.Efraim Flashner
* gnu/packages/gstreamer.scm (gst-plugins-base): Update to 1.8.0. [home-page]: Use https.
2016-03-29gnu: gstreamer: Update to 1.8.0.Efraim Flashner
* gnu/packages/gstreamer.scm (gstreamer): Update to 1.8.0.
2016-03-29Merge branch 'version-0.10.0'Ludovic Courtès
2016-03-29gnu: guix: Update development snapshot.Ludovic Courtès
* gnu/packages/package-management.scm (guix-devel): Update to 7611393. (guix): Set to GUIX-DEVEL.
2016-03-29gnu: Add uwsgi.宋文武
* gnu/packages/web.scm (uwsgi): New variable.
2016-03-29gnu: Add cgit.宋文武
* gnu/packages/version-control.scm (cgit): New variable.
2016-03-28gnu: guix: Default to 0.10.0.Ludovic Courtès
This updates 58f0aae. * gnu/packages/package-management.scm (guix): Set to GUIX-0.10.0.
2016-03-28gnu: guix: Update to 0.10.0.Ludovic Courtès
* gnu/packages/package-management.scm (guix-0.8.3): Rename to... (guix-0.10.0): ... this. Adjust users. (guix): Set to GUIX-0.10.0.
2016-03-28Update NEWS.Ludovic Courtès
2016-03-28guix system: Warn against missing 'guix pull'.Ludovic Courtès
Suggested by Leo Famulari and others. * guix/scripts/system.scm (maybe-suggest-running-guix-pull): New procedure. (perform-action): Call it when ACTION is 'reconfigure.
2016-03-28doc: We have even more than 3,000 packages.Ludovic Courtès
Suggested by Chris Marusich <cmmarusich@gmail.com>. * doc/guix.texi (Limitations): Increase package count.
2016-03-28store: Prepend mirror.hydra.gnu.org to %DEFAULT-SUBSTITUTE-URLS.Ludovic Courtès
This allows GuixSD to default to the right list of URLs, with mirror.hydra.gnu.org coming first. Reported by Chris Marusich <cmmarusich@gmail.com>. * guix/store.scm (%default-substitute-urls): Prepend "mirror.hydra.gnu.org."
2016-03-28doc: Explain why the config file should be stored on the target.Ludovic Courtès
Suggested by Chris Marusich <cmmarusich@gmail.com>. * doc/guix.texi (Proceeding with the Installation): Explain why the config file should be on the target file system.
2016-03-28doc: Suggest 'dhclient -v'.Ludovic Courtès
Suggested by Chris Marusich <cmmarusich@gmail.com>. * doc/guix.texi (Preparing for Installation): Add "-v" for dhclient.
2016-03-28doc: Suggest running "info info" during system installation.Ludovic Courtès
Based on a suggestion by Chris Marusich <cmmarusich@gmail.com>. * doc/guix.texi (System Installation): Suggest running "info info".
2016-03-28doc: Clarify 'cow-store'.Ludovic Courtès
Suggested by Chris Marusich <cmmarusich@gmail.com>. * doc/guix.texi (Proceeding with the Installation): Clarify what 'cow-store' is about.
2016-03-28doc: Make it clear that networking is needed for GuixSD installation.Ludovic Courtès
Suggested by Jan Nieuwenhuizen <janneke@gnu.org>. * doc/guix.texi (Preparing for Installation): Make it clear that networking is required.
2016-03-28doc: Augment documentation about security updates.Ludovic Courtès
* doc/guix.texi (Security Updates): Add paragraph on the big picture of security updates. Cross-reference 'guix lint'. (Invoking guix lint): Add CVE URLs.
2016-03-28nls: Update 'da' translation.Ludovic Courtès
2016-03-28gnu: qtractor: Update to 0.7.5.Ricardo Wurmus
* gnu/packages/music.scm (qtractor): Update to 0.7.5.
2016-03-27gnu: beets: Run tests with python-nose.Leo Famulari
* gnu/packages/music.scm (nose)[native-inputs]: Add python-nose. [arguments]: Replace 'check' and use python-nose.
2016-03-27environment: Properly handle SIGINT.David Thompson
Switching to execlp means that the process spawned in a container is PID 1, which obsoleted one of the 'guix environment --container' tests because the init process can't be killed in the usual manner. * guix/scripts/environment.scm (launch-environment/fork): New procedure. (launch-environment): Switch from system* to execlp. Add handler for SIGINT. (guix-environment): Use launch-environment/fork. * tests/guix-environment-container.sh: Replace abnormal exit test with one that works now that the spawned process is PID 1.
2016-03-27Update 'NEWS'.Ludovic Courtès
2016-03-26gnu: python-pyechonest: Clean up description.Leo Famulari
* gnu/packages/music.scm (pyechonest)[description]: Remove "open source" from the description.
2016-03-26gnu: pspp: Update to 0.10.0.Efraim Flashner
* gnu/packages/maths.scm (pspp): Update to 0.10.0. [inputs]: Switch gtk+-2 to gtk+, gtksourceview-2 to gtksourceview.
2016-03-26gnu: sdl2-ttf: Update to 2.0.14.David Thompson
* gnu/packages/sdl.scm (sdl2-ttf): Update to 2.0.14 and remove bundled libraries from source tarball.
2016-03-26gnu: sdl2-image: Update to 2.0.1.David Thompson
* gnu/packages/sdl.scm (sdl2-image): Update to 2.0.1.
2016-03-26gnu: sdl2-mixer: Update to 2.0.1.David Thompson
* gnu/packages/sdl.scm (sdl2-mixer): Update to 2.0.1 and remove bundled libraries in source tarball.
2016-03-26gnu: sdl-mixer: Add ModPlug support.David Thompson
* gnu/packages/sdl.scm (sdl-mixer)[inputs]: Add libmodplug.
2016-03-26gnu: sdl2: Update to 2.0.4.David Thompson
* gnu/packages/sdl.scm (sdl2): Update to 2.0.4.
2016-03-26doc: Fix typo: "wpa_supplication" --> "wpa_supplicant".Mark H Weaver
* doc/guix.texi (Preparing for Installation): Fix typo.
2016-03-26gnu: crossguid: Set explicit file name for source checkout.David Thompson
* gnu/packages/kodi.scm (crossguid)[source]: Set explicit file-name to satisfy linter.
2016-03-26environment: container: Create dummy home directory and /etc/passwd.David Thompson
* guix/scripts/environment.scm (launch-environment/container): Change $HOME to the current user's home directory instead of /homeless-shelter. Create a dummy /etc/passwd with a single entry for the current user. * doc/guix.texi ("invoking guix environment"): Add a note about the dummy home directory and /etc/passwd.
2016-03-25doc: Mention 'guix challenge' in "Features".Ludovic Courtès
* doc/guix.texi (Features): Mention trust and 'guix challenge'.
2016-03-25doc: Rephrase introduction to give a better overview.Ludovic Courtès
Suggested by myglc2 <myglc2@gmail.com>. * doc/guix.texi (Introduction): Rephrase to mention features and use cases first, and foundations last. (Features): Mention "GuixSD". (Utilities): Change intro: not all the tools are for packagers.
2016-03-25Revert "gnu: expat: Replace with 2.1.1 [fixes CVE-2015-1283]."Mark H Weaver
This reverts commit 6458876597d292ea06f0d41048948fd801cedb8a.
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