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2017-10-08activation: Do not create setuid binaries in the store [security fix].Ludovic Courtès
Fixes <https://bugs.gnu.org/28751>. * gnu/build/activation.scm (activate-setuid-programs)[link-or-copy]: Remove. Use 'copy-file' instead.
2017-10-08gnu: borg: Update to 1.1.0.Leo Famulari
* gnu/packages/backup.scm (borg): Update to 1.1.0. [native-inputs]: Replace python-sphinx-rtd-theme with python-guzzle-sphinx-theme.
2017-10-08gnu: Add python-guzzle-sphinx-theme.Leo Famulari
* gnu/packages/python.scm (python-guzzle-sphinx-theme, python2-guzzle-sphinx-theme): New variables. Co-authored-by: Tobias Geerinckx-Rice <me@tobias.gr>
2017-10-08gnu: kdevelop: Do not hardcode user profile locations in wrapper.Thomas Danckaert
* gnu/packages/kde.scm (kdevelop): [arguments]: Do not add ${HOME}/.guix-profile/{share,lib/plugins} to XDG_DATA_DIRS and QT_PLUGIN_PATH when wrapping the executable.
2017-10-08tests: databases: Add a simple test for MySQL.Christopher Baines
Previously, the activation phase for this service caused some systems using it to not boot. This test checks that it's possible to boot a system using it, and at least start the service. * gnu/tests/databases.scm (%mysql-os, %test-mysql): New variables. (run-mysql-test): New procedure.
2017-10-08linux-initrd: Ensure that the guile used in the initrd is referenced.Christopher Baines
By referencing guile from the initrd output explicitly, it will be present in the store when this initrd is used. If the exact guile used within the initrd isn't present in the store, then after root is switched during the boot process, loading modules (such as (ice-9 popen)) won't work. This fixes guix-patches bug #28399, "Fix mysql activation, and add a basic test". * gnu/system/linux-initrd.scm (expression->initrd)[builder]: Write out a file called references in to the initrd output, which includes the store path for guile.
2017-10-08gnu: youtube-dl: Update to 2017.10.07.Tobias Geerinckx-Rice
* gnu/packages/video.scm (youtube-dl): Update to 2017.10.07.
2017-10-08gnu: offlineimap: Update to 7.1.3.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (offlineimap): Update to 7.1.3.
2017-10-08services: Remove unneeded imported.Ludovic Courtès
This caused a circular dependency. Reported by Oleg Pykhalov <go.wigust@gmail.com> at <https://lists.gnu.org/archive/html/help-guix/2017-10/msg00021.html>. * gnu/services/networking.scm: Remove unneeded import of (gnu system base).
2017-10-08gnu: gnome-calendar: Update to 3.26.2.Tobias Geerinckx-Rice
* gnu/packages/gnome.scm (gnome-calendar): Update to 3.26.2.
2017-10-08gnu: par2cmdline: Update to 0.7.4.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (par2cmdline): Update to 0.7.4.
2017-10-08gnu: munge: Update to 0.5.13.Tobias Geerinckx-Rice
* gnu/packages/admin.scm (munge): Update to 0.5.13.
2017-10-08gnu: aisleriot: Update to 3.22.3.Kei Kebreau
* gnu/packages/gnome.scm (aisleriot): Update to 3.22.3. [inputs]: Use guile-2.2 instead of guile-2.0.
2017-10-08gnu: Add missing mongodb patch to local.mk.Christopher Baines
* gnu/local.mk (dist_patch_DATA): Add the mongodb-support-unknown-linux-distributions.patch.
2017-10-08web: Add nginx-documentation.Christopher Baines
* gnu/packages/web.scm (nginx): Add comment about updating the documentation. (nginx-xslscript): New variable. (nginx-documentation): New variable.
2017-10-08perl: Add perl-parse-recdescent.Christopher Baines
* gnu/packages/perl.scm (perl-parse-recdescent): New variable.
2017-10-08gnu: Add missing input to python-py3status and fix call path.Tomáš Čech
file is used to determine configuration file encoding and py3status fails to start when this tool is missing. * gnu/packages/python.scm (python-py3status)[inputs]: Add file. [arguments]: Modify phases to patch py3status to call file with an absolute path.
2017-10-07pull: Add GUIX_PULL_URL environment variable.Oleg Pykhalov
* guix/scripts/pull.scm (%repository-url): Add GUIX_PULL_URL environment variable. * doc/guix.texi (Invoking guix pull): Mention GUIX_PULL_URL. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-07gnu: sdl: Add debug output.Oleg Pykhalov
* gnu/packages/sdl.scm (sdl, sdl-gfx, sdl-image, sdl-mixer, sdl-net, sdl-ttf): Add debug output. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-07gnu: getmail: Update to 5.4.ng0
* gnu/packages/mail.scm (getmail): Update to 5.4.
2017-10-07gnu: khal: Update to 0.9.8.Leo Famulari
* gnu/packages/calendar.scm (khal): Update to 0.9.8. [arguments]: Make sure to stop building if the documentation fails to build. Skip some failing tests.
2017-10-07pull: Honor 'parallel-job-count'.Ludovic Courtès
* guix/build/pull.scm (build-guix): Use 'n-par-for-each' and honor 'parallel-job-count'.
2017-10-07store: Add missing import.Ludovic Courtès
* guix/store.scm: Use (ice-9 format).
2017-10-07gnu: zile: Update to 2.4.14.Ludovic Courtès
* gnu/packages/zile.scm (zile): Update to 2.4.14.
2017-10-07guix package: '--upgrade' no longer reverses package order.Ludovic Courtès
Reported by Oleg Pykhalov <go.wigust@gmail.com> at <https://lists.gnu.org/archive/html/help-guix/2017-10/msg00000.html>. * guix/scripts/package.scm (options->installable)[upgraded]: Use 'fold-right' instead of 'fold'.
2017-10-07gnu: vsearch: Update to 2.5.0.Ben Woodcroft
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.5.0.
2017-10-06gnu: linux-libre: Update to 4.13.5.Mark H Weaver
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.13.5. (%linux-libre-hash): Update hash.
2017-10-06gnu: linux-libre@4.9: Update to 4.9.53.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.53.
2017-10-06gnu: linux-libre@4.4: Update to 4.4.90.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.90.
2017-10-07system: Really filter out Linux device names for the store.Ludovic Courtès
This is a followup to db4e8fd5d4a07d3be8ce68fb96722ef7077c0eee. Fixes <https://bugs.gnu.org/28445>. Reported by Mark H Weaver <mhw@netris.org>. * gnu/system.scm (ensure-not-/dev): New procedure. (read-boot-parameters)[ensure-not-/dev]: Remove. (operating-system-boot-parameters): Use it.
2017-10-06services: Add MongoDB.Christopher Baines
* gnu/services/databases.scm (%default-mongodb-configuration-file, %mongodb-accounts, mongodb-service-type): New variables. (<mongodb-configuration>): New record type. (mongodb-activation, mongodb-shepherd-service): New procedures. * gnu/tests/databases.scm (%test-mongodb): New variable. * doc/guix.texi (Database Services): Add MongoDB documentation.
2017-10-06gnu: Add mongodb.Christopher Baines
* gnu/packages/databases.scm (mongodb): New variable.
2017-10-06gnu: btrfs-progs: Update to 4.13.2.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (btrfs-progs): Update to 4.13.2.
2017-10-06gnu: glibc-locales: Use 'modify-phases' syntax.Efraim Flashner
* gnu/packages/base.scm (glibc-locales)[arguments]: Use 'modify-phases' syntax.
2017-10-06gnu: guix: Update development snapshot.Ludovic Courtès
* gnu/packages/package-management.scm (guix): Update to 8b920d7.
2017-10-06import: Use a 'file://' URL in 'alist->package' test.Ludovic Courtès
* tests/import-utils.scm ("alist->package with simple source"): Use a 'file://' URL.
2017-10-06uuid: Fix typo in 'uuid=?' test.Ludovic Courtès
* tests/uuid.scm ("uuid=?"): Change to 'test-assert'.
2017-10-06gnu: dconf: Update to 0.26.1.Tobias Geerinckx-Rice
* gnu/packages/gnome.scm (dconf): Update to 0.26.1.
2017-10-06gnu: glade: Update to 3.20.1.Tobias Geerinckx-Rice
* gnu/packages/gnome.scm (glade): Update to 3.20.1.
2017-10-06gnu: tor: Enable directory protocol compression.Tobias Geerinckx-Rice
* gnu/packages/tor.scm (tor)[native-inputs]: Add pkg-config. [inputs]: Add xz and zstd.
2017-10-06gnu: tor: Fix typo.Tobias Geerinckx-Rice
* gnu/packages/tor.scm (tor)[inputs]: Move unquote to its operand.
2017-10-06gnu: octave: Reference makeinfo with absolute path.Arun Isaac
* gnu/packages/maths.scm (octave)[arguments]: Add configure-makeinfo phase. [inputs]: Add texinfo. [native-inputs]: Remove texinfo.
2017-10-05publish: Cache uncompressed nars as well.Ludovic Courtès
Fixes <https://bugs.gnu.org/28664>. Reported by Maxim Cournoyer <maxim.cournoyer@gmail.com>. * guix/scripts/publish.scm (bake-narinfo+nar): When COMPRESSION is 'none, write NAR instead of doing nothing. (make-request-handler): Use 'render-nar/cached' for /nar URLs with no compression. * tests/publish.scm ("with cache", "with cache, uncompressed"): Adjust expected result accordingly.
2017-10-05gnu: vte-ng: Update to 0.50.1.a.Marius Bakke
* gnu/packages/gnome.scm (vte-ng): Update to 0.50.1.a.
2017-10-05gnu: openjpeg: Update to 2.3.0.Marius Bakke
* gnu/packages/patches/openjpeg-CVE-2017-12982.patch, gnu/packages/patches/openjpeg-CVE-2017-14040.patch, gnu/packages/patches/openjpeg-CVE-2017-14041.patch, gnu/packages/patches/openjpeg-CVE-2017-14151.patch, gnu/packages/patches/openjpeg-CVE-2017-14152.patch, gnu/packages/patches/openjpeg-CVE-2017-14164.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. * gnu/packages/image.scm (openjpeg): Update to 2.3.0. [source](patches): Remove. * gnu/packages/gstreamer.scm (gst-plugins-bad)[arguments]: Adjust openjpeg substitution.
2017-10-05gnu: imagemagick: Update to 6.9.9-18.Marius Bakke
Fixes <https://bugs.gnu.org/28692>. Reported by Diego Nicola Barbato <dnbarbato@posteo.de>. * gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-18.
2017-10-05gnu: libpng@1.2: Update to 1.2.59.Leo Famulari
* gnu/packages/image.scm (libpng-1.2): Update to 1.2.59.
2017-10-05gnu: certbot, python-acme: Update to 0.19.0.Leo Famulari
* gnu/packages/tls.scm (certbot, python-acme): Update to 0.19.0.
2017-10-05gnu: lightning: Update to 2.1.2.Kei Kebreau
* gnu/packages/assembly.scm (lightning): Update to 2.1.2.
2017-10-05gnu: Add pdsh.Ricardo Wurmus
* gnu/packages/ssh.scm (pdsh): New variable.
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