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2022-08-01gnu: Add r-millefy.Mădălin Ionel Patrașcu
* gnu/packages/bioinformatics.scm (r-millefy): New variable.
2022-08-01gnu: exiv2: Fix test failure on ppc64le and aarch64.Marcel van der Boom
ppc64 and aarch64 do not raise exception and thus output and exit code for test is different. See: https://github.com/Exiv2/exiv2/issues/365 and https://github.com/Exiv2/exiv2/issues/933 * gnu/packages/image.scm (exiv2)[arguments]: Add 'adjust-tests' phase. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2022-08-01gnu: Add python-biblib.Philip McGrath
* gnu/packages/python-xyz.scm (python-biblib): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-08-01services: opensmtpd: Make commands setgid to "smtpq" by default.Maya
This is a patch that fixes "<executable name>: this program must be setgid smtpq". * gnu/services/mail.scm (<opensmtpd-configuration>)[setgid-commands?]: New field. (opensmtpd-set-gids): New procedure. (opensmtpd-service-type)[extensions]: Add SETUID-PROGRAM-SERVICE-TYPE extension. * doc/guix.texi (Mail Services): Document it. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2022-08-01gnu: tractor: Update to 3.14.Danial Behzadi
* gnu/packages/tor.scm (tractor): Update to 3.14. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-08-01gnu: Add comma after “i.e.” in descriptions.Paul A. Patience
* gnu/packages/bioconductor.scm (r-anota)[description]: Add comma after “i.e.”. * gnu/packages/code.scm (xenon)[description]: Same. * gnu/packages/cran.scm (r-crosstalk)[description]: Same. * gnu/packages/python-xyz.scm (python-radon)[description]: Same. * gnu/packages/statistics.scm (r-logspline)[description]: Same. * gnu/packages/suckless.scm (tabbed)[description]: Same. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-08-01gnu: hdf5-1.8: Add missing comma to linker flag.Paul A. Patience
* gnu/packages/maths.scm (hdf5-1.8)[arguments]<#:phases>: Add missing comma to linker flag. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-08-01gnu: guile-lens: Fix build.Z572
* gnu/packages/guile-xyz.scm (guile-lens) [phases]{run-hall}: replace "dist" to "build-system". Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-08-01gnu: xdot: Build with librsvg-for-system.Denis 'GNUtoo' Carikli
* gnu/packages/graphviz.scm (xdot)[inputs]: Replace librsvg with librsvg-for-system. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-08-01gnu: Add cardpeek.Denis 'GNUtoo' Carikli
* gnu/packages/security-token.scm (cardpeek): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-08-01gnu: python-sep: Update to 1.2.1Sharlatan Hellseher
* gnu/packages/astronomy.scm: (python-sep): Update to 1.2.1. Inherit from libsep Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-08-01gnu: Add libsepSharlatan Hellseher
* gnu/packages/astronomy.scm: (libsep): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-08-01gnu: gnutls: Add 3.7.7.Ludovic Courtès
* gnu/packages/tls.scm (gnutls-latest): New variable.
2022-08-01download: 'url-fetch' closes its HTTP/HTTPS port.Ludovic Courtès
* guix/build/download.scm (url-fetch)[fetch]: In the http/https case, close PORT before returning.
2022-08-01gnu: python-bbknn: Set NUMBA_CACHE_DIR.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-bbknn)[arguments]: Add phase 'set-numba-cache-dir.
2022-08-01gnu: python-umap-learn: Disable unreliable test.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-umap-learn)[arguments]: Disable test_densmap_trustworthiness_on_iris_supervised.
2022-08-01gnu: python-umap-learn: Set NUMBA_CACHE_DIR.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-umap-learn)[arguments]: Add phase to set NUMBA_CACHE_DIR.
2022-07-31gnu: jami: Apply upstream patch that fixes a usability issue.Maxim Cournoyer
* gnu/packages/patches/jami-fix-esc-bug.patch: New patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/jami.scm (%jami-sources): Apply it.
2022-07-31gnu: jami: Update to 20220726.1515.da8d1da.Maxim Cournoyer
* gnu/packages/jami.scm (jami): Update to 20220726.1515.da8d1da. [configure-flags]: New argument. [phases]{fix-version-string}: Adjust file name. {use-desktop-opengl}: Delete obsolete phase. {patch-source}: New phase. [native-inputs]: Add googletest and vulkan-headers. Replace qttools-5 with qttools. [inputs]: Add libxkbcommon, qt5compat, qtnetworkauth, qtpositioning and vulkan-loader. Remove qtwebengine-5, qtwebchannel-5, qtgraphicaleffects, qtquickcontrols-5 and qtquickcontrols2-5. Update qtsvg-5, qtmultimedia-5 and qtdeclarative-5 to their Qt 6 equivalent.
2022-07-31gnu: Deprecate jami-gnome for jami.Maxim Cournoyer
* gnu/packages/jami.scm (jami-gnome): Delete package, deprecating it for jami.
2022-07-31gnu: Remove jami-libclient.Maxim Cournoyer
* gnu/packages/jami.scm (jami-libclient): Delete variable. (libringclient): Likewise. (jami-gnome)[inputs]: Remove jami-libclient. (jami)[inputs]: Likewise.
2022-07-31gnu: libjami: Enable test agent.Maxim Cournoyer
* gnu/packages/jami.scm (libjami)[configure-flags]: Add '--enable-agent' and remove FIXME. [tests?]: Update comment.
2022-07-31gnu: libjami: Update to 20220726.1515.da8d1da.Maxim Cournoyer
* gnu/packages/patches/jami-fix-crash-on-quit.patch: Delete file. * gnu/packages/patches/jami-images-loading.patch: Likewise. * gnu/packages/patches/jami-libclient-audio-managers.patch: Likewise. * gnu/packages/patches/jami-memory-usage.patch: Likewise. * gnu/local.mk (dist_patch_DATA): De-register removed patches. * gnu/packages/jami.scm (%jami-version): Update to 20220726.1515.da8d1da. (libjami)[configure-flags]: Add '--disable-static'. (jami-apply-custom-patches): Adjust for top directory renaming. (%ffmpeg-default-configure-flags): Add muxer support for g726 and g726le. Add demuxer support for g723_1, g726 and g726le. Add encoder/decoder support for g726, g726le and g723_1. Add decoder support for g729. (ffmpeg-jami)[patches]: Add 'libopusenc-reload-packet-loss-at-encode'. (jami-libclient)[native-inputs]: New field. [inputs]: Add ffmpeg-jami and libxkbcommon. [propagated-inputs]: Replace qtbase-5 with qtbase.
2022-07-31build: qt: Add qtbase argument and wrap Qt environment variables exactly.Maxim Cournoyer
* guix/build-system/qt.scm (default-qtbase): New variable. (lower) <#:qtbase>: Add argument... [build-inputs]: ... and propagate it here. (qt-build): Add qtbase argument. (qt-cross-build): Likewise. * guix/build/qt-utils.scm (%default-qt-major-version): New variable. (variables-for-wrapping): Add qt-major-version argument, and use it to format the various path prefixes. Wrap QT environment variables exactly. (wrap-qt-program*): Add qt-major-version argument, and pass it to variables-for-wrapping. (wrap-qt-program): Add qt-major-version argument, and pass it to wrap-qt-program*. (wrap-all-qt-programs): Add qtbase argument, and extract the major version from it, passing it to wrap-qt-program*.
2022-07-31gnu: Add qtpositioning.Maxim Cournoyer
* gnu/packages/qt.scm (qtpositioning): New variable.
2022-07-31gnu: Add qtnetworkauth, version 6.3.1.Maxim Cournoyer
* gnu/packages/qt.scm (qtnetworkauth): New variable.
2022-07-31gnu: qtnetworkauth: Rename to qtnetworkauth-5.Maxim Cournoyer
Automated with: git grep -l qtnetworkauth | xargs sed 's/\bqtnetworkauth\b/\0-5/g' -i
2022-07-31gnu: Add qttools, version 6.3.1.Maxim Cournoyer
* gnu/packages/qt.scm (qttools): New variable.
2022-07-31gnu: qttools: Rename to qttools-5.Maxim Cournoyer
Automated with: git grep -l qttools | xargs sed 's/\bqttools\b/\0-5/g' -i git checkout NEWS
2022-07-31gnu: Add qt5compat.Maxim Cournoyer
* gnu/packages/qt.scm (qt5compat): New variable.
2022-07-31gnu: Add qtwebengine, version 6.3.1.Maxim Cournoyer
* gnu/packages/qt.scm (qtwebengine): New variable.
2022-07-31gnu: qtwebengine: Rename to qtwebengine-5.Maxim Cournoyer
Automated with: git grep -l qtwebengine | xargs sed 's/\bqtwebengine\b/\0-5/g' -i git checkout NEWS
2022-07-31gnu: Add qtwebchannel, version 6.3.1.Maxim Cournoyer
* gnu/packages/qt.scm (qtwebchannel): New variable.
2022-07-31gnu: qtwebchannel: Rename to qtwebchannel-5.Maxim Cournoyer
Automated via: git grep -l qtwebchannel | xargs sed 's/\bqtwebchannel\b/\0-5/g' -i git checkout NEWS
2022-07-31gnu: Add qtwebsockets, version 6.3.1.Maxim Cournoyer
* gnu/packages/qt.scm (qtwebsockets): New variable.
2022-07-31gnu: qtwebsockets: Rename to qtwebsockets-5.Maxim Cournoyer
Automated via: git grep -l qtwebsockets | xargs sed 's/\bqtwebsockets\b/\0-5/g' -i git checkout NEWS
2022-07-31gnu: qtquickcontrols2: Define as obsoleted by qtdeclarative.Maxim Cournoyer
* gnu/packages/qt.scm (qtquickcontrols2): New variable.
2022-07-31gnu: qtquickcontrols2: Rename to qtquickcontrols2-5.Maxim Cournoyer
Automated via: git grep -l qtquickcontrols2 | xargs sed 's/\bqtquickcontrols2\b/\0-5/g' -i git checkout NEWS
2022-07-31gnu: qtquickcontrols: Rename to qtquickcontrols-5.Maxim Cournoyer
Automated via: git grep -l qtquickcontrols | xargs sed 's/\bqtquickcontrols\b/\0-5/g' -i git checkout NEWS
2022-07-31gnu: Add qtdeclarative, version 6.3.1.Maxim Cournoyer
* gnu/packages/qt.scm (qtdeclarative): New variable.
2022-07-31gnu: qtdeclarative: Rename to qtdeclarative-5.Maxim Cournoyer
Automated via the following commands: git grep -l '\bqtdeclarative\b' | xargs sed -E 's/qtdeclarative/\0-5/g' -i git checkout NEWS
2022-07-31gnu: Add qtmultimedia, version 6.3.1.Maxim Cournoyer
* gnu/packages/qt.scm (qtmultimedia): New variable.
2022-07-31gnu: qtmultimedia: Rename to qtmultimedia-5.Maxim Cournoyer
Automated via: git grep -l qtmultimedia | xargs sed 's/qtmultimedia/qtmultimedia-5/g' -i git checkout NEWS
2022-07-31gnu: Add qtshadertools.Maxim Cournoyer
* gnu/packages/qt.scm (qtshadertools): New variable.
2022-07-31gnu: qpwgraph: Migrate to Qt 6 and add libxkbcommon input.Maxim Cournoyer
* gnu/packages/audio.scm (qpwgraph)[inputs]: Replace qtbase-5 with qtbase, qtsvg-5 with qtsvg. Add libxkbcommon.
2022-07-31gnu: Add qtsvg, version 6.3.1.Maxim Cournoyer
* gnu/packages/qt.scm (qtsvg): New variable.
2022-07-31gnu: qtsvg-5: Fix indentation.Maxim Cournoyer
* gnu/packages/qt.scm (qtsvg-5): Fix indentation.
2022-07-31gnu: qtsvg: Rename variable to qtsvg-5.Maxim Cournoyer
This is in preparation of the qtsvg update to version 6. This change was automated via the following command: git grep -l '\bqtsvg\b' | xargs sed 's/qtsvg/qtsvg-5/g' -i
2022-07-31gnu: qtbase: Revert to gtk+ (3) instead of gtk (4).Maxim Cournoyer
This revert the upgrade from GTK 3 to 4 in 8d7fdbe261e32a63df8c47f06b1a43095b6084c7. Qt doesn't yet support GTK 4. * gnu/packages/qt.scm (qtbase)[native-inputs]: Remove gtk. [inputs]: Do not replace gtk+ by gtk.
2022-07-31gnu: qtbase: Enable test suite.Maxim Cournoyer
* gnu/packages/qt.scm (qtbase)[tests?]: Delete argument. [configure-flags]: Add "-DQT_BUILD_TESTS=ON". [phases]{check}: Move after the patch-prl-files phase and override. [native-inputs]: Add xvfb-run.
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