Age | Commit message (Collapse) | Author |
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* gnu/packages/patches/m4-readlink-EINVAL.patch: Remove file.
* gnu-system.am (dist_patch_DATA): Remove it.
* gnu/packages/m4.scm (m4): Remove patch.
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* gnu/packages/gcc.scm (gcc-4.8): Update to 4.8.4. Remove patch.
* gnu/packages/patches/gcc-fix-pr61801.patch: Remove.
* gnu-system.am (dist_patch_DATA): Adjust accordingly.
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Fixes <http://bugs.gnu.org/19402>.
Reported by Mark H Weaver <mhw@netris.org>.
* guix/packages.scm (patch-and-repack): Change "--batch" to "--force".
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* gnu/packages/python.scm (python-pysam, python2-pysam): New variables.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/compression.scm (fastjar): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/qemu.scm (qemu): Update to 2.2.0.
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* gnu/packages/ntp.scm (ntp): Update to 4.2.8. Add openssl to inputs.
Add pkg-config to native-inputs. Change source URI to archive.ntp.org.
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This reverts commit afc720d34c43a2fcf0b5871226c15ad6c5f73697.
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Reported by Federico Beffa <beffa@ieee.org>
and Eric Bavier <ericbavier@gmail.com>.
* guix/build-system/python.scm (package-with-explicit-python): Do
nothing when P's build system is not PYTHON-BUILD-SYSTEM.
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* gnu/packages/python.scm (python2-matplotlib, python2-scipy, python2-numpy):
Comment out python2-matplotlib and the packages making use of it as the
generation of the derivation of these packages takes very long.
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* guix/packages.scm (first-value): Remove.
(define-memoized/v): New macro.
(package-transitive-supported-systems): Rewrite.
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* gnu/packages.scm (scheme-files): Call 'sort' on result.
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* nix-upstream: Remove subproject.
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* gnu/packages/xfce.scm (xfce4-terminal): New variable.
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* gnu/packages/gnome.scm (vte, vte/gtk+-2): New variables.
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* gnu/services/xorg.scm (%default-xsessions): New variable.
(xsessions-directory): New procedure.
(slim-service): Add #:sessions and #:auto-login-session parameters.
[slim.cfg]: Honor #:sessions.
(xinitrc): Adjust accordingly.
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* nix/sync-with-upstream: Remove.
* bootstrap: Remove uses of 'git submodule' and 'sync-with-usptream'.
* .gitmodules: Remove.
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* gnu/packages/bioinformatics.scm (bowtie): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/services/networking.scm (static-networking-service): Remove
#:inetutils parameter. Rewrite using 'configure-network-interface'
and 'set-network-interface-flags'.
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* guix/build/syscalls.scm (sizeof*, type-size, write-type, write-types,
read-type, read-types, define-c-struct): New macros.
(SIOCSIFFLAGS, SIOCGIFADDR, SIOCSIFADDR): New variables.
(sockaddr-in, sockaddr-in6): New C structs.
(write-socket-address!, read-socket-address,
set-network-interface-flags, set-network-interface-address,
network-interface-address, configure-network-interface): New
procedures.
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* gnu/packages/perl.scm (perl-clone): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/gtk.scm, gnu/packages/python.scm (python-cairocffi,
python2-cairocffi): Move variables from gtk to python module to avoid
circular dependency.
Reported by Mark H Weaver <mhw@netris.org>
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* gnu/packages/python.scm (python-matplotlib, python2-matplotlib): Add gtk3
backends with the necessary inputs and a 'configure-environment' phase. Add
the optional 'python-pillow' dependency. Move 'python-pyparsing' from
'inputs' to 'propagated-inputs' as it is required at run time.
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* gnu/packages/gtk.scm (python-cairocffi, python2-cairocffi): New variables.
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* gnu/packages/python.scm (python-xcffib, python2-xcffib): New variables.
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* guix/build/python-build-system.scm (rename-pth-file): New rename-pth-file
phase and corresponding function.
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* gnu/packages/gnuzilla.scm (icecat)[arguments]: Add
--enable-pulseaudio.
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* gnu/packages/linux.scm (linux-libre): Update to version 3.18.1.
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* gnu/packages/perl.scm (perl-test-simple): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/perl.scm (perl-test-deep): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/perl.scm (perl-test-nowarnings): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/perl.scm (perl-test-tester): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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This reverts commit 31557440c29f8d93b366422bfec4dab341eff79f as it did not
provide the desired effect. The test is still failing.
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* gnu/packages/bioinformatics.scm (bedtools): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/tmux.scm (tmux): Update to 1.9a
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/bioinformatics.scm (samtools): disable tests for all non-64-bit
systems because of an upstream bug in the test data.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/groff.scm (groff): Disable parallel builds.
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* gnu/packages/groff.scm (groff): Update to 1.22.3.
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* gnu/packages/ghostscript.scm (ghostscript): Update to 9.14.0.
Change license to agpl3+.
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* gnu/packages/ghostscript.scm (lcms): Update to 2.6.
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* gnu/packages/patches/icecat-CVE-2014-1587-bug-1042567.patch,
gnu/packages/patches/icecat-CVE-2014-1587-bug-1072847.patch,
gnu/packages/patches/icecat-CVE-2014-1587-bug-1079729.patch,
gnu/packages/patches/icecat-CVE-2014-1587-bug-1080312.patch,
gnu/packages/patches/icecat-CVE-2014-1587-bug-1089207.patch,
gnu/packages/patches/icecat-CVE-2014-1590.patch,
gnu/packages/patches/icecat-CVE-2014-1592.patch,
gnu/packages/patches/icecat-CVE-2014-1593.patch,
gnu/packages/patches/icecat-CVE-2014-1594.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/gnuzilla.scm (icecat): Add them.
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Fixes a bug whereby removing the next-to-last item in a profile would
lead to an obscure error, as shown at
<http://lists.gnu.org/archive/html/guix-devel/2014-12/msg00292.html>.
Reported by Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>.
* guix/profiles.scm (profile-derivation)[inputs]: Use (list info-dir
"out") instead of just INFO-DIR.
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* tests/profiles.scm (test-assertm): New macro.
("profile-derivation"): Use it instead of 'test-assert' +
'run-with-store'.
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* gnu/packages/game-development.scm: New file
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
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* gnu/packages/gnome.scm (vala): New variable.
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* gnu/packages/video.scm (youtube-dl): Update to 2014.12.15.
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* gnu/packages/xfce.scm (xfce4-battery-plugin): New variable.
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