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2019-12-18gnu: Add r-reactome-db.•••* gnu/packages/bioconductor.scm (r-reactome-db): New variable. Ricardo Wurmus
2019-12-18gnu: libmicrohttpd: Update to 0.9.69.•••* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.69. Efraim Flashner
2019-12-18gnu: cmst: Update to 2019.01.13.•••* gnu/packages/connman.scm (cmst): Update to 2019.01.13. Efraim Flashner
2019-12-18gnu: python-ecdsa: Actually run the test suite.•••* gnu/packages/python-crypto.scm (python-ecdsa)[arguments]: Replace 'check phase. [native-inputs]: Add python-pytest. Efraim Flashner
2019-12-18gnu: python-ecdsa: Update to 0.14.1.•••* gnu/packages/python-crypto.scm (python-ecdsa): Update to 0.14.1. [inputs]: Move openssl ... [native-inputs]: ... to here. [propagated-inputs]: Add python-six. Efraim Flashner
2019-12-17swh: Fix API call for getting origin.•••When using the archival linter, git origins already in the archive where not recognized due to an API change and where repeatedly asked for archival. This is fixed here. * guix/swh.scm (lookup-origin): Fix API URI for getting origin. (<origin>): Fix comment with API URI example. Björn Höfling
2019-12-17gnu: linux-libre: Update to 5.3.17.•••* gnu/packages/linux.scm (linux-libre-5.3-version): Update to 5.3.17. (linux-libre-5.3-pristine-source): Update hash. Mark H Weaver
2019-12-17gnu: linux-libre@4.19: Update to 4.19.90.•••* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.90. (linux-libre-4.19-pristine-source): Update hash. Mark H Weaver
2019-12-17gnu: linux-libre@4.14: Update to 4.14.159.•••* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.159. (linux-libre-4.14-pristine-source): Update hash. Mark H Weaver
2019-12-17gnu: Add r-biobroom.•••* gnu/packages/bioconductor.scm (r-biobroom): New variable. Ricardo Wurmus
2019-12-17gnu: Add r-bioassayr.•••* gnu/packages/bioconductor.scm (r-bioassayr): New variable. Ricardo Wurmus
2019-12-17gnu: Add r-chemminer.•••* gnu/packages/bioconductor.scm (r-chemminer): New variable. Ricardo Wurmus
2019-12-17gnu: Add r-bigpint.•••* gnu/packages/bioconductor.scm (r-bigpint): New variable. Ricardo Wurmus
2019-12-17gnu: Add r-bigmemoryextras.•••* gnu/packages/bioconductor.scm (r-bigmemoryextras): New variable. Ricardo Wurmus
2019-12-17gnu: Add r-biggr.•••* gnu/packages/bioconductor.scm (r-biggr): New variable. Ricardo Wurmus
2019-12-17gnu: Add r-hyperdraw.•••* gnu/packages/bioconductor.scm (r-hyperdraw): New variable. Ricardo Wurmus
2019-12-17gnu: Add r-hypergraph.•••* gnu/packages/bioconductor.scm (r-hypergraph): New variable. Ricardo Wurmus
2019-12-17gnu: Add r-rsbml.•••* gnu/packages/bioconductor.scm (r-rsbml): New variable. Ricardo Wurmus
2019-12-17gnu: Add r-bifet.•••* gnu/packages/bioconductor.scm (r-bifet): New variable. Ricardo Wurmus
2019-12-17gnu: Add r-bicare.•••* gnu/packages/bioconductor.scm (r-bicare): New variable. Ricardo Wurmus
2019-12-17gnu: Add r-bhc.•••* gnu/packages/bioconductor.scm (r-bhc): New variable. Ricardo Wurmus
2019-12-17gnu: Add r-bgx.•••* gnu/packages/bioconductor.scm (r-bgx): New variable. Ricardo Wurmus
2019-12-17gnu: Add r-bgmix.•••* gnu/packages/bioconductor.scm (r-bgmix): New variable. Ricardo Wurmus
2019-12-17gnu: Add r-rsvg.•••* gnu/packages/cran.scm (r-rsvg): New variable. Ricardo Wurmus
2019-12-17gnu: Add r-shinycssloaders.•••* gnu/packages/cran.scm (r-shinycssloaders): New variable. Ricardo Wurmus
2019-12-17gnu: Add r-lim.•••* gnu/packages/cran.scm (r-lim): New variable. Ricardo Wurmus
2019-12-17gnu: Add r-diagram.•••* gnu/packages/cran.scm (r-diagram): New variable. Ricardo Wurmus
2019-12-17gnu: Add r-poibin.•••* gnu/packages/cran.scm (r-poibin): New variable. Ricardo Wurmus
2019-12-17gnu: Add libsbml.•••* gnu/packages/bioinformatics.scm (libsbml): New variable. Ricardo Wurmus
2019-12-17gnu: Add love-nuklear.•••* gnu/packages/game-development.scm (love-nuklear): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Jethro Cao
2019-12-17gnu: txr: Update to 229.•••* gnu/packages/lisp.scm (txr): Update to 229. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Guillaume Le Vaillant
2019-12-17gnu: gfortran: change to a hidden package•••* gnu/packages/gcc.scm (gfortran-4.8, gfortran-4.9) (gfortran-5, gfortran-6, gfortran-7, gfortran-8) (gfortran-9): Wrap in 'hidden-package'. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Konrad Hinsen
2019-12-17gnu: python-elasticsearch: Update to 7.1.0.•••* gnu/packages/python-web.scm (python-elasticsearch): Update to 7.1.0. Ludovic Courtès
2019-12-17gnu: r-pracma: Update to 2.2.9.•••* gnu/packages/cran.scm (r-pracma): Update to 2.2.9. Ricardo Wurmus
2019-12-17gnu: r-repr: Update to 1.0.2.•••* gnu/packages/cran.scm (r-repr): Update to 1.0.2. Ricardo Wurmus
2019-12-17gnu: r-ggeffects: Update to 0.14.0.•••* gnu/packages/cran.scm (r-ggeffects): Update to 0.14.0. [propagated-inputs]: Remove r-dplyr and r-rlang. Ricardo Wurmus
2019-12-17gnu: r-dvmisc: Update to 1.1.4.•••* gnu/packages/cran.scm (r-dvmisc): Update to 1.1.4. [propagated-inputs]: Add r-tab; remove r-purrr. Ricardo Wurmus
2019-12-17gnu: r-ttr: Update to 0.23-6.•••* gnu/packages/cran.scm (r-ttr): Update to 0.23-6. Ricardo Wurmus
2019-12-17gnu: r-argparser: Update to 0.6.•••* gnu/packages/cran.scm (r-argparser): Update to 0.6. Ricardo Wurmus
2019-12-17gnu: r-ordinal: Update to 2019.12-10.•••* gnu/packages/cran.scm (r-ordinal): Update to 2019.12-10. Ricardo Wurmus
2019-12-17gnu: r-seurat: Update to 3.1.2.•••* gnu/packages/bioinformatics.scm (r-seurat): Update to 3.1.2. Ricardo Wurmus
2019-12-17gnu: r-bh: Update to 1.72.0-1.•••* gnu/packages/statistics.scm (r-bh): Update to 1.72.0-1. Ricardo Wurmus
2019-12-17gnu: Add r-tab.•••* gnu/packages/cran.scm (r-tab): New variable. Ricardo Wurmus
2019-12-17gnu: Add r-gee.•••* gnu/packages/cran.scm (r-gee): New variable. Ricardo Wurmus
2019-12-17gnu: shotwell: Clean-up inputs.•••* gnu/packages/gnome.scm (shotwell)[arguments]: Add phase to skip gtk-update-icon-cache. [inputs]: Sort alphabetically. Move glib:bin ... [native-inputs]: ... to here. Remove desktop-file-utils, gtk+:bin. Efraim Flashner
2019-12-17gnu: dia: Fix version number.•••This commit is actually after to 0.97.3 release. * gnu/packages/gnome.scm (dia)[version]: Use git-version. [source]: Update to new source uri. Use git-file-name. Efraim Flashner
2019-12-17gnu: dia: Don't override bootstrap phase.•••* gnu/packages/gnome.scm (dia)[arguments]: Remove custom 'run-autogen phgase. Add phase before 'bootstrap to not run configure. Efraim Flashner
2019-12-17gnu: dia: Fix-up inputs.•••* gnu/packages/gnome.scm (dia)[inputs]: Sort alphabetically. Move glib:bin ... [native-inputs]: ... to here. Sort alphabetically. Efraim Flashner
2019-12-17gnu: libidl: Hard-code name in source uri.•••* gnu/packages/gnome.scm (libidl)[source]: Hard-code name. Efraim Flashner
2019-12-17gnu: libidl: Set upstream name.•••* gnu/packages/gnome.scm (libidl)[properties]: New field. Efraim Flashner
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