Age | Commit message (Collapse) | Author |
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* gnu/packages/guile.scm (guile-3.0/libgc-7): Inherit from GUILE-3.0.3.
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Until now, we'd call (nar-sha256 file) unconditionally. Thus, if FILE
was a directory, we would traverse it for no reason, and then call
'deduplicate' on FILE, which would again traverse it.
This change also removes redundant (mkdir-p store) calls from the loop,
and avoids 'lstat' calls by using 'scandir*'.
* guix/store/deduplication.scm (deduplicate): Add named loop. Move
'mkdir-p' outside the loop. Use 'scandir*' instead of 'scandir'. Do
not call 'nar-sha256' when FILE has type 'directory.
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* guix/build/compile.scm (optimization-options): Use '-O1' for the
simple case.
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* gnu/packages/emacs-xyz.scm (emacs-helm): Update to 3.6.3.
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* gnu/packages/emacs-xyz.scm (emacs-helm-fish-completion): Update to 0.5.
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* gnu/packages/radio.scm (js8call)[inputs]: Use regular hamlib.
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* gnu/packages/radio.scm (wsjtx-hamlib): Update to 2.2.1.
[arguments]: Add a 'fix-tests' phase.
(wsjtx): Update to 2.2.1.
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* gnu/packages/geo.scm (qgis)[arguments]: Disable a few more failing tests.
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* gnu/packages/bioconductor.scm (r-rgreat): New variable.
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* gnu/packages/crates-io.scm (rust-libc-0.2)[arguments]: Don't skip
build.
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* gnu/packages/crates-io.scm (rust-libc-0.2): Update to 0.2.71.
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* gnu/packages/crates-io.scm (rust-rayon-1.3): Rename to rust-rayon-1.
(rust-criterion-0.3, rust-criterion-0.2, rust-gimli-0.18,
rust-hashbrown-0.5, rust-indexmap-1.3, rust-jpeg-decoder-0.1,
rust-nasm-rs-0.1, rust-scroll-0.9, rust-syn-1.0, rust-syn-0.15)
[arguments]: Adjust accordingly.
* gnu/packages/gnome.scm (librsvg-next)[arguments]: Same.
* gnu/packages/rust-apps.scm (tokei)[arguments]: Same.
* gnu/packages/video.scm (rav1e)[arguments]: Same.
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* gnu/packages/crates-io.scm (rust-rayon-1.1): Remove variable.
(rust-criterion-0.2, rust-gimli-0.18, rust-hashbrown-0.5,
rust-jpeg-decoder-0.1, rust-scroll-0.9, rust-syn-0.15)
[arguments]: Replace rust-rayon-1.1 with 1.3.
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* gnu/packages/crates-io.scm (rust-rayon-core-1.7): Rename to
rust-rayon-core-1.
(rust-criterion-0.2, rust-rayon-1.3, rust-rayon-1.1, rust-rayon-0.8)
[arguments]: Adjust accordingly.
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* gnu/packages/crates-io.scm (rust-rayon-core-1.5): Remove variable.
(rust-criterion-0.2, rust-rayon-1.1) [arguments]: Replace
rust-rayon-core-1.5 with 1.7.
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* gnu/packages/sequoia.scm (sequoia)[arguments]: Move unquote next to
the expression it applies to.
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* gnu/packages/crates-io.scm (rust-regex-1.3): Rename to rust-regex-1.
(rust-ansi-term-0.12, rust-bindgen-0.52, rust-bindgen-0.51,
rust-bindgen-0.50, rust-bindgen-0.37, rust-bindgen-0.49, rust-clap-2,
rust-compiletest-rs-0.3, rust-console-0.9, rust-console-0.7,
rust-docopt-1.1, rust-env-logger-0.7, rust-env-logger-0.6,
rust-env-logger-0.5, rust-gimli-0.18, rust-globset-0.4,
rust-grep-cli-0.1, rust-grep-matcher-0.1, rust-grep-regex-0.1,
rust-grep-searcher-0.1, rust-ignore-0.4, rust-lalrpop-0.17,
rust-lalrpop-util-0.17, rust-locale-config-0.3, rust-localeconfig-0.2,
rust-nom-5, rust-nom-4.2, rust-once-cell-1.2, rust-proptest-0.9,
rust-proptest-0.8, rust-pulldown-cmark-0.4, rust-regex-automata-0.1,
rust-rusqlite-0.19, rust-scan-fmt-0.2, rust-syn-1.0, rust-syn-0.15,
rust-ucd-parse-0.1, rust-version-sync-0.8) [arguments]: Adjust accordingly.
* gnu/packages/gnome.scm (librsvg-next)[arguments]: Same.
* gnu/packages/rust-apps.scm (fd, ripgrep, tokei, rust-cargo-c)
[arguments]: Same.
* gnu/packages/sequoia.scm (sequoia)[arguments]: Same.
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* gnu/packages/crates-io.scm (rust-regex-1.1): Remove variable.
(rust-bindgen-0.50, rust-bindgen-0.49, rust-clap-2,
rust-compiletest-rs-0.2, rust-console-0.7, rust-docopt-1.1,
rust-env-logger-0.7, rust-env-logger-0.6, rust-env-logger-0.5,
rust-gimli-0.18, rust-globset-0.4, rust-grep-cli-0.1,
rust-grep-matcher-0.1, rust-grep-regex-0.1, rust-grep-searcher-0.1,
rust-ignore-0.4, rust-nom-5, rust-nom-4.2, rust-once-cell-1.2,
rust-proptest-0.9, rust-proptest-0.8, rust-pulldown-cmark-0.4,
rust-regex-automata-0.1, rust-rusqlite-0.19, rust-syn-0.15,
rust-ucd-parse-0.1, rust-version-sync-0.8) [arguments]: Replace
rust-regex-1.1 with 1.3.
* gnu/packages/rust-apps.scm (ripgrep)[arguments]: Same.
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* gnu/packages/crates-io.scm (rust-once-cell-0.1): New variable.
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* gnu/packages/crates-io.scm (rust-gettext-rs-0.4): New variable.
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* gnu/packages/crates-io.scm (rust-gettext-sys-0.19): New variable.
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* gnu/packages/crates-io.scm (rust-locale-config-0.2): New variable.
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* gnu/packages/crates-io.scm (rust-proptest-0.7): New variable.
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* gnu/packages/crates-io.scm (rust-regex-syntax-0.4): New variable.
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* gnu/packages/crates-io.scm (rust-section-testing-0.0): New variable.
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* gnu/packages/crates-io.scm (rust-tempfile-3.1): Rename to ...
(rust-tempfile-3): .. this.
(rust-cairo-rs-0.8, rust-cairo-rs-0.7, rust-cc-1.0,
rust-compiletest-rs-0.3, rust-filetime-0.2, rust-gdk-pixbuf-sys-0.9,
rust-gio-sys-0.9, rust-git2-0.11, rust-glib-0.9, rust-glib-0.8,
rust-glib-sys-0.9, rust-gobject-sys-0.9, rust-handlebars-2.0,
rust-lscolors-0.6, rust-native-tls-0.2, rust-nix-0.15, rust-nix-0.14,
rust-no-panic-0.1, rust-pango-sys-0.9, rust-pangocairo-0.10,
rust-proptest-0.9, rust-proptest-0.8, rust-rustdoc-stripper-0.1,
rust-rustls-0.16, rust-rusty-fork-0.2, rust-sourcefile-0.1,
rust-tiff-0.2, rust-tokio-0.2, rust-tokio-fs-0.1, rust-tokio-uds-0.2,
rust-wayland-client-0.23, rust-wayland-client-0.21, rust-xattr-0.2)
[arguments]: Adjust accordingly.
* gnu/packages/rust-apps.scm (rust-cbindgen, tokei)[arguments]: Same.
* gnu/packages/sequoia.scm (sequoia)[arguments]: Same.
* gnu/packages/terminals.scm (alacritty)[arguments]: Same.
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* gnu/packages/crates-io.scm (rust-tempfile-3.0): Remove variable.
(rust-compiletest-rs-0.3, rust-filetime-0.2, rust-handlebars-2.0,
rust-nix-0.15, rust-nix-0.14, rust-proptest-0.9, rust-proptest-0.8,
rust-rustls-0.16, rust-rusty-fork-0.2, rust-tiff-0.2, rust-tokei-fs-0.1,
rust-tokio-uds-0.2, rust-xattr-0.2) [arguments]: Replace
rust-tempfile-3.0 with 3.1.
* gnu/packages/rust-apps.scm (tokei)[arguments]: Same.
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* gnu/packages/crates-io.scm (rust-proptest-0.9): Update to 0.9.
[arguments]: Don't skip build. In cargo-inputs replace rust-rand-0.4
with 0.6, rust-rand-chacha-0.2 with 0.1, rust-rand-xorshift-0.2 with 0.1.
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* gnu/packages/statistics.scm (r-zoo): Move this variable from here...
* gnu/packages/cran.scm (r-zoo): ...to here.
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* gnu/packages/statistics.scm (r-directlabels): Move this variable from here...
* gnu/packages/cran.scm (r-directlabels): ...to here.
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* gnu/packages/statistics.scm (r-boruta): Move this variable from here...
* gnu/packages/cran.scm (r-boruta): ...to here.
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* gnu/packages/statistics.scm (r-boruta)[description]: Fix indentation, add
line breaks, and complete the first sentence fragment.
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* gnu/packages/statistics.scm (r-fit-models): Update to 0.63.
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* gnu/packages/statistics.scm (r-glmnet): Update to 4.0-2.
[propagated-inputs]: Add r-survival.
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* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.3.
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* gnu/packages/statistics.scm (r-backports): Update to 1.1.8.
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* gnu/packages/statistics.scm (r-ggplot2): Update to 3.3.2.
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* gnu/packages/cran.scm (r-isoband): Update to 0.2.2.
[propagated-inputs]: Remove r-rcpp.
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* gnu/packages/cran.scm (r-zvcv): Update to 2.1.0.
[propagated-inputs]: Remove r-partitions; add r-bh, r-dplyr, r-magrittr, and r-rlinsolve.
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* gnu/packages/cran.scm (r-umap): Update to 0.2.6.0.
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* gnu/packages/cran.scm (r-ldheatmap): Update to 0.99-8.
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* gnu/packages/cran.scm (r-nonnest2): Update to 0.5-4.
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* gnu/packages/cran.scm (r-rcppgsl): Update to 0.3.8.
[native-inputs]: Remove r-knitr.
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* gnu/packages/cran.scm (r-ggeffects): Update to 0.15.0.
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* gnu/packages/cran.scm (r-bayestestr): Update to 0.7.0.
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* gnu/packages/cran.scm (r-rstatix): Update to 0.6.0.
[propagated-inputs]: Add r-generics.
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* gnu/packages/cran.scm (r-radiant-data): Update to 1.3.9.
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* gnu/packages/cran.scm (r-tinytex): Update to 0.24.
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* gnu/packages/cran.scm (r-xfun): Update to 0.15.
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* gnu/packages/cran.scm (r-calibrate): Update to 1.7.7.
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