Age | Commit message (Collapse) | Author |
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The autogenerated tarball was modified upstream.
* gnu/packages/man.scm (scdoc)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
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Amend the changes in 1a265842e634656411bc7304c4648273f174f65e to properly
access the origin patches from libtirpc.
I noticed this as guix weather didn't work for this package.
* gnu/packages/onc-rpc.scm (libtirpc/hurd)[source]: Call origin-patches
on (package-source libtirpc) rather than the libtirpc package.
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* gnu/packages/lua.scm: Sort package module imports alphabetically.
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* gnu/packages/python-xyz.scm (python-pygments/fixed): New variable.
(python-pygments)[replacement]: Graft.
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* gnu/packages/emacs-xyz.scm (emacs-kotlin-mode): New variable.
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* gnu/packages/emacs-xyz.scm (emacs-marginalia): Update to 0.4.
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* gnu/packages/gnome.scm (komikku): Update to 0.27.0.
[inputs]: Add python-brotli and webkitgtk.
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* gnu/packages/lolcode.scm (lci): Move from here...
* gnu/packages/esolangs.scm (lolcode-lci): ... to here.
* gnu/packages/lolcode.scm: Delete file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
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* etc/news.scm: Add missing French translations.
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* gnu/packages/version-control.scm (tig): Update to 2.5.3.
Co-authored-by: jgart <jgart@dismail.de>
Co-authored-by: donotshake <donotshake:matrix.org>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* guix/gnu-maintenance.scm (latest-ftp-release): Pass #:timeout to
'ftp-open'.
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* guix/gnu-maintenance.scm (latest-ftp-release): Remove #:ftp-open, #:ftp-close,
and #:keep-file?.
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* gnu/packages/mpi.scm (hwloc-1)[properties]: New field.
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This brings total updater coverage, as reported by 'guix refresh
--list-updaters', from 78% to 88.3%. Among many other things, it covers
freedesktop.org packages.
* guix/gnu-maintenance.scm (html-updatable-package?)
(latest-html-updatable-release): New procedures.
(%generic-html-updater): New variable.
* doc/guix.texi (Invoking guix refresh): Document it.
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* guix/gnu-maintenance.scm (latest-html-release): Use 'tarball->version'
rather than 'package-name->name+version' to extract the version number.
This fixes problems with packages like 'netsurf' and 'libdom' that have
"-src" in their tarball name, where "src" would be taken as the new
version number.
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* guix/gnu-maintenance.scm (latest-html-release): #:file->signature
defaults to #f.
[file->signature/guess]: New procedure.
[url->release]: Use it when FILE->SIGNATURE is #f.
Introduce 'links' variable.
(url-prefix-rewrite): Check whether URL is true before calling
'string-prefix?'.
(latest-savannah-release): Adjust comment about detached signatures.
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* guix/gnu-maintenance.scm (release-file?): Reject ".md5sum",
".sha1sum", and ".sha256sum".
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* guix/gnu-maintenance.scm (latest-html-release): Allow for URL to be an
arbitrary URL rather than a relative URL reference.
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* guix/gnu-maintenance.scm (html->sxml): Remove. Autoload (htmlprag)
instead.
* doc/guix.texi (Requirements): Mention 'guix refresh' for the Guile-Lib
dependency.
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This is a followup to a04aef2430645357d7796969d4b6453478ff8a3f.
* m4/guix.m4 (GUIX_CHECK_GUILE_ZLIB): New macro.
* configure.ac: Use it when checking for Guile-zlib.
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Fixes <https://bugs.gnu.org/46803>.
Reported by Luis Felipe <luis.felipe.la@protonmail.com>.
* doc/guix.texi (Getting Started): Introduce the term "profile".
(Invoking guix package): Likewise.
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Previously, we'd get:
$ guix-daemon --discover
error: basic_string::_M_construct null not valid
* nix/nix-daemon/guix-daemon.cc (parse_opt): Change second argument to
'settings.set' to properly handle case where ARG is NULL.
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* gnu/packages/gnome.scm (gnome-autoar): Update to 0.3.1.
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* gnu/packages/compression.scm (pzstd): Use 'package/inherit' over zstd so any
graft applied to zstd cascades onto pzstd which is built from the same
source.
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* gnu/packages/algebra.scm (fftwf, fftw-openmpi),
gnu/packages/audio.scm (ztoolkit-rsvg),
gnu/packages/bioinformatics.scm (python2-dendropy),
gnu/packages/boost.scm (boost-with-python2),
gnu/packages/check.scm (python2-mock, python2-pytest-mock),
gnu/packages/cups.scm (hplip-minimal),
gnu/packages/freedesktop.scm (libinput-minimal),
gnu/packages/gettext.scm (gnu-gettext),
gnu/packages/glib.scm (python2-pygobject),
gnu/packages/gnome.scm (gdl-minimal, libsoup-minimal, python2-pyatspi),
gnu/packages/groff.scm (groff-minimal),
gnu/packages/jami.scm (ffmpeg-jami),
gnu/packages/libcanberra.scm (libcanberra/gtk+-2),
gnu/packages/lirc.scm (python2-lirc),
gnu/packages/llvm.scm (clang-runtime-3.5),
gnu/packages/mpi.scm (java-openmpi, openmpi-thread-multiple),
gnu/packages/node.scm (libnode),
gnu/packages/onc-rpc.scm (libtirpc/hurd),
gnu/packages/python-compression.scm (bitshuffle-for-snappy),
gnu/packages/python-crypto.scm (python2-pycrypto, python2-cryptography)
(python2-cryptography, python2-m2crypto),
gnu/packages/python-web.scm (python2-html2text, python2-tornado)
(python2-terminado, python2-ndg-httpsclient, python2-websocket-client)
(python2-rauth, python2-url, python2-s3transfer),
gnu/packages/python-xyz.scm (python2-psutil, python2-serpent)
(python2-humanfriendly, python2-empy, python2-parse-type, python2-polib)
(python2-jsonschema, python2-pystache, python2-cython, python2-numpydoc)
(python2-ipyparallel, python2-traitlets, python2-dbus)
(python2-beautifulsoup4, python2-pep517, python2-flake8, python2-llfuse)
(python2-tlsh, python-file, python2-notebook, python-jupyter-console-minimal)
(python2-contextlib2, python2-promise, python2-anyjson, python2-amqp)
(python2-kombu, python2-billiard, python2-celery, python2-whoosh)
(python2-jellyfish, python-rope, ptpython-2, python2-binaryornot)
(python2-setproctitle, python2-argcomplete, python2-xopen, python2-isort)
(python2-radon, python2-rfc6555, python2-activepapers, python2-send2trash)
(python2-cloudpickle, python2-reparser),
gnu/packages/python.scm (python2-called-python),
gnu/packages/qt.scm (python2-sip, python-pyqt-without-qtwebkit, python2-pyqt)
(python-qscintilla, python-pyqt+qscintilla),
gnu/packages/scanner.scm (sane-backends),
gnu/packages/sdl.scm (guile3.0-sdl2),
gnu/packages/selinux.scm (checkpolicy, libselinux, libsemanage, secilc)
(python-sepolgen, policycoreutils),
gnu/packages/serialization.scm (lua5.1-libmpack, lua5.2-libmpack),
gnu/packages/simulation.scm (fenics),
gnu/packages/statistics.scm (python2-statsmodels),
gnu/packages/texinfo.scm (info-reader),
gnu/packages/wxwidgets.scm (wxwidgets-gtk2, wxwidgets-gtk2-3.1),
gnu/packages/xml.scm (xmlsec-nss),
gnu/packages/xorg.scm (uim-gtk, uim-qt),
guix/build-system/python.scm (package-with-explicit-python)
(strip-python2-variant): Use PACKAGE/INHERIT.
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* gnu/packages/gnome.scm (gvfs)[properties]: New field, marking
CVE-2019-12447, CVE-2019-12448, and CVE-2019-12449 as fixed.
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* gnu/packages/gnome.scm (gnome-shell)[properties]: New field, marking
CVE-2019-3820 as fixed.
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Fixes <https://issues.guix.gnu.org/47176>. The solution was suggested by
bonzini on OFTC's #qemu channel.
* gnu/packages/virtualization.scm (qemu)[snippet]: Delete bundled meson copy.
[native-inputs]: Add meson-next.
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* gnu/packages/build-tools.scm (meson-next): New variable.
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* gnu/packages/patches/mpg321-CVE-2019-14247.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/mp3.scm (mpg321)[source]: Apply it.
Signed-off-by: Léo Le Bouter <lle-bout@zaclys.net>
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/web.scm (varnish-modules): Update to 0.17.1.
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* gnu/packages/tor.scm (tor): Update to 0.4.5.7.
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* gnu/packages/python-xyz.scm (snakemake)[propagated-inputs]: Add
python-nbformat, python-pulp, and python-toposort.
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* gnu/packages/python-xyz.scm (python-toposort): New variable.
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* gnu/packages/python-xyz.scm (python-pulp): New variable.
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* gnu/packages/python-xyz.scm (python-amply): New variable.
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* gnu/packages/emacs-xyz.scm (emacs-easy-kill): Update to 0.9.4.
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* gnu/packages/emacs-xyz.scm (emacs-leaf): Update to 4.4.0.
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* gnu/packages/python-xyz.scm (python-pikepdf): Update to 2.9.0.
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* gnu/packages/plotutils.scm (asymptote): Update to 2.70.
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* gnu/packages/version-control.scm (b4)[source]: Add snippet to not
require too specific of a version.
Reported-by: Kyle Meyer <kyle@kyleam.com>
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* gnu/packages/databases.scm (libmemcached): Disable test suite. Removing
trailing #t.
[phases]{fix-configure}: Remove useless group in pattern.
{disable-failing-tests}: Remove phase.
{build-and-install-html-doc}: Order after the build phase.
[home-page]: Please 'guix lint'.
Reported-by: Simon Tournier <zimon.toutoune@gmail.com>
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* gnu/packages/bioinformatics.scm (hisat2): Update to 2.2.1.
[source]: Fetch from git repository on Github.
[arguments]: Add phase to build manual; remove trailing #t from other phases.
[native-inputs]: Remove unzip.
[home-page]: Update.
[inputs]: Add python-wrapper.
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mongodb 3.4.10 has unpatched CVEs and mongodb 3.4.24 has some files in the
release tarball under the SSPL, therefore we cannot provide mongodb while
upholding to good security standards.
It turns out feff80cec3c97a3df2c20d300be12d67f79d4f22 was right since while
the main license file wasnt altered to SSPL, some files in the tree contain
SSPL headers.
* gnu/packages/databases.scm (go-gopkg.in-mgo.v2): Remove.
* gnu/packages/databases.scm (mongo-tools): Remove.
* doc/guix.texi (mongodb-service-type): Remove.
* gnu/tests/databases.scm (%test-mongodb, %mongodb-os, run-mongodb-test):
Remove.
* gnu/services/databases.scm (mongodb-configuration, mongodb-configuration?,
mongodb-configuration-mongodb, mongodb-configuration-config-file,
mongodb-configuration-data-directory, mongodb-service-type,
%default-mongodb-configuration-file, %mongodb-accounts, mongodb-activation,
mongodb-shepherd-service): Remove.
* gnu/packages/databases.scm (mongodb): Remove.
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This is a follow-up to commit ab9629b7c91ff7d6392a03512cfe442823267777.
* gnu/packages/version-control.scm (git)[native-inputs]: Fix git-manpages's
hash.
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* gnu/packages/version-control.scm (git): Update to 2.31.0.
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* gnu/packages/python-web.scm (python2-urllib3)[base]: Base off of
python-urllib3/fixed.
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* gnu/packages/python-web.scm (python-urllib3/fixed): New variable.
(python-urllib3)[replacement]: Graft.
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* gnu/packages/file-systems.scm (tmsu)[arguments]: Don't install go
source files. Install binary as tmsu instead of TMSU.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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