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2022-12-04gnu: libapparmor: Restrict supported systems to GNU/Linux....* gnu/packages/apparmor.scm (libapparmor)[supported-systems]: New field. Ludovic Courtès
2022-12-04gnu: Add pam-apparmor....* gnu/packages/apparmor.scm (pam-apparmor): New variable. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Hilton Chain
2022-12-04gnu: Add apparmor....* gnu/packages/apparmor.scm (apparmor): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Hilton Chain
2022-12-04gnu: Add libapparmor....* gnu/packages/apparmor.scm: New file. (libapparmor): New variable. * gnu/local.mk (GNU_SYSTEM_MODULES): Add the file. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Hilton Chain
2022-12-04gnu: Add velox....* gnu/packages/wm.scm (velox): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> zamfofex
2022-12-04nls: Update translations....po/packages/vi.po: New file. po/packages/LINGUAS: Add it. Julien Lepiller
2022-12-04gnu: Remove rust-rust-crypto-0.2....* gnu/packages/crates-io.scm (rust-rust-crypto-0.2): Delete variable. Efraim Flashner
2022-12-04gnu: Remove rust-ethbloom-0.5....* gnu/packages/crates-io.scm (rust-ethbloom-0.5): Delete variable. Efraim Flashner
2022-12-04gnu: Remove rust-ethereum-types-0.9....* gnu/packages/crates-io.scm (rust-ethereum-types-0.9): Delete variable. Efraim Flashner
2022-12-04gnu: Remove rust-generational-arena-0.2....* gnu/packages/crates-io.scm (rust-generational-arena-0.2): Delete variable. Efraim Flashner
2022-12-04gnu: Remove rust-gimli-0.23....* gnu/packages/crates-io.scm (rust-gimli-0.23): Delete variable. Efraim Flashner
2022-12-04gnu: Remove rust-goblin-0.0....* gnu/packages/crates-io.scm (rust-goblin-0.0): Delete variable. Efraim Flashner
2022-12-04gnu: Remove rust-crossterm-winapi-0.6....* gnu/packages/crates-io.scm (rust-crossterm-winapi-0.6): Delete variable. Efraim Flashner
2022-12-04gnu: Remove rust-crossterm-winapi-0.4....* gnu/packages/crates-io.scm (rust-crossterm-winapi-0.4): Delete variable. Efraim Flashner
2022-12-04gnu: Remove rust-gfx-gl-0.6....* gnu/packages/crates-graphics.scm (rust-gfx-gl-0.6): Delete variable. Efraim Flashner
2022-12-04gnu: Remove rust-glib-0.8....* gnu/packages/crates-gtk.scm (rust-glib-0.8): Delete variable. Efraim Flashner
2022-12-04gnu: Remove rust-block-buffer-0.2....* gnu/packages/crates-io.scm (rust-block-buffer-0.2): Delete variable. Efraim Flashner
2022-12-04gnu: Remove rust-chalk-derive-0.68....* gnu/packages/crates-io.scm (rust-chalk-derive-0.68): Delete variable. Efraim Flashner
2022-12-04gnu: Remove rust-chalk-ir-0.68....* gnu/packages/crates-io.scm (rust-chalk-ir-0.68): Delete variable. Efraim Flashner
2022-12-04gnu: jami: Apply a patch to fix a crash when using SIP....* gnu/packages/patches/jami-sipaccount-segfault.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/jami.scm (%jami-sources): Apply it. Maxim Cournoyer
2022-12-04tests: Fix guix-system.sh test....The regression was introduce with commit c7793b82efd3383a9f7adf0dfa82d71ee032e41b ("gnu: raspberry-pi: Add a bootloader-chain for the Raspberry Pi and os examples.") due to the examples needing to be built for the aarch64-linux system. * tests/guix-system.sh: Invoke guix system build with '--system=aarch64-linux' to build the Raspberry Pi systems. Maxim Cournoyer
2022-12-04gnu: Do not use 'local-file' in Raspberry Pi OS examples....As this breaks the 'tests/guix-system.sh' test. * gnu/system/examples/raspberry-pi-64-nfs-root.tmpl (%my-public-key): Delete variable. (raspberry-pi-64-nfs-root) [services]: Remove key from openssh-configuration. * gnu/system/examples/raspberry-pi-64.tmpl: Likewise. Reported-by: Vagrant Cascadian <vagrant@debian.org> Maxim Cournoyer
2022-12-04gnu: python-protobuf@3.6: Fix inputs and arguments....Fixes a regression introduced in 9b016e29912b11f52e67e59b211fa016d88fea4a, whereby the 'inputs' field would be invalid, plus "--cpp_implementation" wouldn't work. * gnu/packages/protobuf.scm (python-protobuf-3.6)[arguments]: New field. [inputs]: No longer refer to the inputs of PYTHON-PROTOBUF. Ludovic Courtès
2022-12-03gnu: ungoogled-chromium: Update to 108.0.5359.94-1....* gnu/packages/chromium.scm (%chromium-version): Set to 108.0.5359.94. (%ungoogled-origin, ungoogled-chromium): Update hashes. Marius Bakke
2022-12-03gnu: Add ts4900-utils....* gnu/packages/embedded.scm (ts4900-utils): New variable. Maxim Cournoyer
2022-12-02services: configuration: Rename location accessor to "source-location"....Fixes <https://issues.guix.gnu.org/59423>. * gnu/services/configuration.scm (define-configuration-helper): Rename the accessor of the %location field from "NAME-location" to "NAME-source-location". Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Reported-by: Pierre Langlois <pierre.langlois@gmx.com> Maxim Cournoyer
2022-12-02gnu: loko-scheme: Update to 0.12.0....* gnu/packages/loko.scm (loko-scheme): Update to 0.12.0. [arguments]<#:make-flags>: No need to specify GDB scripts directory. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Zhu Zihao
2022-12-02gnu: loko-scheme: Use G-expressions....* gnu/packages/loko.scm (loko-scheme)[arguments]: Use G-expressions. <#:phases>: In 'akku-fixes', replace "(assoc-ref inputs name)" with "this-package-native-input". [native-inputs]: Use label-less style. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Zhu Zihao
2022-12-02modules: Recognize #:declarative?....This addition has become necessary since commit 54003af85cc5b689bd328b30617c93ed2f5fd647, which makes use of #:declarative? in modules produced by 'make-config.scm'. Reported by zimoun <zimon.toutoune@gmail.com>. * guix/modules.scm (extract-dependencies): Recognize #:declarative?, which was introduced in Guile 3.0.8. Ludovic Courtès
2022-12-02gnu: python-protobuf: Use C++ implementation....* gnu/packages/protobuf.scm (python-protobuf): Use C++ implementation. [inputs]: Add protobuf. [arguments]: Add --cpp_implementation configure flags. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Ontje Lünsdorf
2022-12-02gnu: Add rust-k9....* gnu/packages/crates-io.scm (rust-k9-0.11): New variable. Marius Bakke
2022-12-02gnu: rust-digest: Update to 0.10.6....* gnu/packages/crates-io.scm (rust-digest-0.10): Update to 0.10.6. Marius Bakke
2022-12-02gnu: QtWebEngine: Use more system libraries....* gnu/packages/qt.scm (qtwebengine)[source](snippet): Remove more files. [arguments]: Pass QT_FEATURES_system_foo for all supported libraries. [inputs]: Replace "harfbuzz" with HARFBUZZ-5. Marius Bakke
2022-12-02gnu: python-biom-format: Update to 2.1.12....* gnu/packages/bioinformatics.scm (python-biom-format): Update to 2.1.12. [arguments]: Remove "relax" phase; update "disable-broken-tests" phase. [propagated-inputs]: Add python-scikit-bio. Ricardo Wurmus
2022-12-02gnu: Add python-scikit-bio....* gnu/packages/bioinformatics.scm (python-scikit-bio): New variable. Ricardo Wurmus
2022-12-02gnu: Add python-hdmedians....* gnu/packages/statistics.scm (python-hdmedians): New variable. Ricardo Wurmus
2022-12-02gnu: python-pairtools: Update to 1.0.2....* gnu/packages/bioinformatics.scm (python-pairtools): Update to 1.0.2. [source]: Update Github URL. [arguments]: Update patch in "fix-references" phase. [native-inputs]: Remove python-nose. [inputs]: Remove. [propagated-inputs]: Add python-bioframe, python-pandas, python-pysam, python-pyyaml, and python-scipy. [home-page]: Update. Ricardo Wurmus
2022-12-02gnu: python-pairtools: Run tests conditionally....* gnu/packages/bioinformatics.scm (python-pairtools)[arguments]: Run tests conditionally. Ricardo Wurmus
2022-12-02gnu: python-pybedtools: Use pyproject-build-system....* gnu/packages/bioinformatics.scm (python-pybedtools)[build-system]: Use pyproject-build-system. [arguments]: Import (guix build pyproject-build-system). Ricardo Wurmus
2022-12-02gnu: python-htsget: Update to 0.2.6....* gnu/packages/bioinformatics.scm (python-htsget): Update to 0.2.6. [build-system]: Use pyproject-build-system. Ricardo Wurmus
2022-12-02gnu: python-cellbender: Update to 0.2.2....* gnu/packages/bioinformatics.scm (python-cellbender): Update to 0.2.2. [build-system]: Use pyproject-build-system. Ricardo Wurmus
2022-11-27gnu: Add bgpq3....* gnu/packages/networking.scm (bgpq3): New variable. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr> Felix Lechner
2022-12-02gnu: rust-zerocopy: Add 0.6.1....* gnu/packages/crates-io.scm (rust-zerocopy-0.6): New variable. (rust-zerocopy-0.3): Inherit from it. Marius Bakke
2022-12-02gnu: rust-zerocopy-derive: Add 0.3.2....* gnu/packages/crates-io.scm (rust-zerocopy-derive-0.3): New variable. (rust-zerocopy-derive-0.2): Inherit from it. Marius Bakke
2022-12-02gnu: Add rust-sha1-smol....* gnu/packages/crates-io.scm (rust-sha1-smol-1): New variable. Marius Bakke
2022-12-02gnu: rust-md-5: Add 0.10.5....* gnu/packages/crates-io.scm (rust-md-5-0.10): New variable. (rust-md-5-0.9): Inherit from it. Marius Bakke
2022-12-02gnu: rust-md5-asm: Update to 0.5.0....* gnu/packages/crates-io.scm (rust-md5-asm-0.5): New variable. (rust-md5-asm-0.4): Inherit from it. Marius Bakke
2022-12-02gnu: Add rust-atomic....* gnu/packages/crates-io.scm (rust-atomic-0.5): New variable. Marius Bakke
2022-12-02gnu: rust-memoffset: Add 0.7.1....* gnu/packages/crates-io.scm (rust-memoffset-0.7): New variable. (rust-memoffset-0.6): Inherit from it. Marius Bakke
2022-12-02gnu: rust-gl: Add 0.14....* gnu/packages/crates-graphics.scm (rust-gl-0.14): New variable. (rust-gl-0.11): Inherit. Marius Bakke