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2023-05-04gnu: Add python-goatools....* gnu/packages/bioinformatics.scm (python-goatools): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Navid Afkhami
2023-05-04gnu: Add r-rcircos....* gnu/packages/cran.scm (r-rcircos): New variable. Navid Afkhami
2023-05-04build: Do not fail when '.git' is missing....This is a followup to a5d719012e0f5115aa89b767edc1fe1a3505915c. * Makefile.am (.git/hooks/pre-push): Add dash. Ludovic Courtès
2023-05-04gnu: Add python-diff-cover....* gnu/packages/python-xyz.scm (python-diff-cover): New variable. Ricardo Wurmus
2023-05-04gnu: Add python-loguru....* gnu/packages/python-xyz.scm (python-loguru): New variable. Ricardo Wurmus
2023-05-04gnu: Add python-pytest-mypy-plugins....* gnu/packages/check.scm (python-pytest-mypy-plugins): New variable. Ricardo Wurmus
2023-05-04gnu: Add python-chevron....* gnu/packages/python-xyz.scm (python-chevron): New variable. Ricardo Wurmus
2023-05-04gnu: Add python-iteround....* gnu/packages/python-xyz.scm (python-iteround): New variable. Ricardo Wurmus
2023-05-04build: Do not fail when 'git' is missing....This is a followup to 8b972da068708a8b17f3ab153ea940690ca49ca9. * Makefile.am (.git/config): Add dash. Ludovic Courtès
2023-05-04gnu: airspyhf: Update to 1.6.8-1.40836c5....* gnu/packages/radio.scm (airspyhf): Update to 1.6.8-1.40836c5. Guillaume Le Vaillant
2023-05-04gnu: linux-libre 5.15: Update to 5.15.110....* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.110. (linux-libre-5.15-pristine-source): Update hash. Leo Famulari
2023-05-04gnu: linux-libre 6.1: Update to 6.1.27....* gnu/packages/linux.scm (linux-libre-6.1-version): Update to 6.1.27. (linux-libre-6.1-pristine-source): Update hash. Leo Famulari
2023-05-04gnu: linux-libre: Update to 6.2.14....* gnu/packages/linux.scm (linux-libre-6.2-version): Update to 6.2.14. (linux-libre-6.2-pristine-source): Update hash. Leo Famulari
2023-05-04news: Add entry for '--with-configure-flag'....* etc/news.scm: Add entry. Ludovic Courtès
2023-05-04transformations: Add '--with-configure-flag'....* guix/transformations.scm (transform-package-configure-flag): New procedure. (%transformation-options, %transformation-options) (show-transformation-options-help/detailed): Add it. * tests/transformations.scm ("options->transformation, with-configure-flag"): New test. * doc/guix.texi (Package Transformation Options): Document it. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Sarthak Shah
2023-05-04gnu: sakura: Remove input labels....* gnu/packages/terminals.scm (sakura)[native-inputs]: Remove input labels. Ludovic Courtès
2023-05-04gnu: peek: Remove input labels....* gnu/packages/video.scm (peek)[inputs, native-inputs]: Remove labels. Ludovic Courtès
2023-05-04gnu: tint2: Remove input labels....* gnu/packages/xdisorg.scm (tint2)[native-inputs]: Remove input labels. Ludovic Courtès
2023-05-04gnu: maim: Remove input labels....* gnu/packages/xdisorg.scm (maim)[inputs]: Remove labels. Ludovic Courtès
2023-05-04gnu: armadillo: Remove input labels....* gnu/packages/maths.scm (armadillo)[inputs]: Remove labels. Ludovic Courtès
2023-05-04style: Make 'safe' policy less conservative....Previously, a mere (arguments '(#:tests? #f)) would lead guix style -S inputs --input-simplification=safe to bail out. It now recognizes such trivial argument lists and proceeds. * guix/scripts/style.scm (trivial-package-arguments?): New procedure. (simplify-package-inputs): Use it in the 'safe case instead of 'null?'. * tests/style.scm ("input labels, 'safe' policy, trivial arguments"): New test. Ludovic Courtès
2023-05-04gnu: vulkan-loader: Skip tests on riscv64-linux....* gnu/packages/vulkan.scm (vulkan-loader)[arguments]: Skip tests when building on riscv64-linux. Efraim Flashner
2023-05-04gnu: exiv2: Adjust tests on riscv64-linux....* gnu/packages/image.scm (exiv2)[arguments]: Also use the custom 'adjust-tests phase when building for riscv64-linux. Efraim Flashner
2023-05-04gnu: r-bigmemory: Remove several supported systems....Where the package consistently fails to build. * gnu/packages/statistics.scm (r-bigmemory)[supported-systems]: Remove armhf-linux, aarch64-linux and powerpc64le-linux. Christopher Baines
2023-05-04gnu: gcc-11: Adapt patching for hurd to not use gexp's....As this causes issues with gcc-cross-boot0, since it doesn't use gexp's and that means the builder script ends up broken. I'm not testing this properly, I've only confirmed that with this change, you can generate a derivation for hello for i586-gnu where that derivation and all inputs don't have broken builder scripts. Plus the output for hello on x86_64-linux is unchanged. * gnu/packages/gcc.scm (gcc-11)[arguments]: Rewrite to not use gexps. [native-inputs]: Add a patch for the hurd if that's the target. Christopher Baines
2023-05-04profiles: 'texlive-font-maps' gracefully handles lack of texlive inputs....Fixes <https://issues.guix.gnu.org/63043>. * guix/profiles.scm (texlive-font-maps): Define 'texlive-inputs'. [build]: Use it. Return #f when TEXLIVE-INPUTS is empty. Ludovic Courtès
2023-05-04import: elpa: Standardize warning message....* guix/import/elpa.scm (melpa-recipe->origin): Standardize warning message. Ludovic Courtès
2023-05-04import: Cosmetic tweaks to 'recursive-import'....* guix/import/utils.scm (recursive-import): Tweak docstring. Simplify 'apply' call. Ludovic Courtès
2023-05-04import: elpa: Use the expected repo in recursive imports....* guix/import/elpa.scm (elpa-recursive-import): Pass REPO in calls to 'elpa->guix-package'. Ludovic Courtès
2023-05-04import: elpa: 'elpa->guix-package' accepts other keyword arguments....This is a followup to 3c24da4260f28b4ed57efda0296688a50ac94628. * guix/import/elpa.scm (elpa->guix-package): Add #:allow-other-keys. Ludovic Courtès
2023-05-04gnu: dune-common: Skip tests that fail on aarch64-linux....* gnu/packages/patches/dune-common-skip-failing-tests.patch: New file. * gnu/packages/maths.scm (dune-common)[source]: Add it * gnu/local.mk (dist_patch_DATA): Register it. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Felix Gruber
2023-05-04ftp-client: 'connect*' retries until the timeout has expired....Partly fixes <https://issues.guix.gnu.org/63024>. Reported by Greg Hogan <code@greghogan.com> and Timo Wilken <guix@twilken.net>. * guix/ftp-client.scm (connect*): When 'select' returns an empty set, try again until TIMEOUT has expired. Ludovic Courtès
2023-05-03gnu: rdiff-backup: Update to 2.2.4....* gnu/packages/backup.scm (rdiff-backup): Update to 2.2.4. [inputs]: Add python-pyaml. Eric Bavier
2023-05-03gnu: pinball: Update to 0.3.20230219....* gnu/packages/games.scm (pinball): Update to 0.3.20230219. [inputs]: Use sdl-union. [arguments]: Adjust configure flags. Use gexps. Remove debug outpu. Eric Bavier
2023-05-03gnu: python-wxpython: Add a debug output...* gnu/packages/wxwidgets.scm (python-wxpython) [outputs]: New field. [arguments]: Provide the '--debug' build option in the configure phase. Maxim Cournoyer
2023-05-03gnu: python-wxpython: Use gexps....* gnu/packages/wxwidgets.scm (python-wxpython) [arguments]: Use gexps. Provide the '--use_syswx' build option via the WXPYTHON_BUILD_ARGS environment variable. Maxim Cournoyer
2023-05-03gnu: wxwidgets: Add a debug output....* gnu/packages/wxwidgets.scm (wxwidgets) [outputs]: New field. [arguments]: Add --enable-debug_info to #:configure-flags argument. Maxim Cournoyer
2023-05-03gnu: wxwidgets: Update to 3.2.2.1....* gnu/packages/wxwidgets.scm (wxwidgets): Update to 3.2.2.1. Maxim Cournoyer
2023-05-03gnu: pigx-sars-cov-2: Update to 0.0.9....* gnu/packages/bioinformatics.scm (pigx-sars-cov-2): Update to 0.0.9. Ricardo Wurmus
2023-05-03gnu: emacs-circadian: Fix build....* gnu/packages/emacs-xyz.scm (emacs-circadian)[arguments]<#:phases>: Skip failing tests. Nicolas Goaziou
2023-05-03gnu: emacs-lacarte: Fix build....* gnu/packages/emacs-xyz.scm (emacs-lacarte)[source]: Use GitHub as upstream. Fix version number. [description]: Expound it. [license]: Set to GPL3+. Nicolas Goaziou
2023-05-03gnu: emacs-markup-faces: Fix build....* gnu/packages/emacs-xyz.scm (emacs-markup-faces)[source]: Use GitHub as upstream, MELPA Stable failed us… [description]: Appease linter and fix capitalization. Nicolas Goaziou
2023-05-03services: cups: Use cups-minimal to avoid PAM authentication....Fixes <https://issues.guix.gnu.org/63198>. Our CUPS service doesn't currently extend the PAM configuration, and prevents users from authenticating. Use cups-minimal, which has no PAM support. * gnu/services/cups.scm (cups-configuration) [cups]: Use cups-minimal. (opaque-cups-configuration): Likewise. Maxim Cournoyer
2023-05-03gnu: Add sipp....* gnu/packages/telephony.scm (sipp): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Ivan Gankevich
2023-05-03gnu: Add libfyaml....* gnu/packages/serialization.scm (libfyaml): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Alexey Abramov
2023-05-03gnu: rrdtool: Update to 1.8.0....* gnu/packages/rrdtool.scm (rrdtool): Update to 1.8.0. [source]: Change URI making Github the primary distribution point; [inputs]: Use new style; [arguments]: Use gexps, remove PRE-CONFIGURE phase. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Aleksandr Vityazev
2023-05-03gnu: Add emacs-riscv-mode....* gnu/packages/emacs-xyz.scm (emacs-riscv-mode): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Gabriel Wicki
2023-05-03gnu: open-adventure: Update to 1.16....* gnu/packages/games.scm (open-adventure): Update to 1.16. Nicolas Goaziou
2023-05-03gnu: emacs-osm: Update to 0.12....* gnu/packages/emacs-xyz.scm (emacs-osm): Update to 0.12. Nicolas Goaziou
2023-05-03gnu: emacs-ivy-rich: Update to 0.1.7....* gnu/packages/emacs-xyz.scm (emacs-ivy-rich): Update to 0.1.7. Nicolas Goaziou