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2016-07-02gnu: Add perl-ipc-system-simple....* gnu/packages/perl.scm (perl-ipc-system-simple): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Alex Sassmannshausen
2016-07-02gnu: Add perl-guard....* gnu/packages/perl.scm (perl-guard): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Alex Sassmannshausen
2016-07-02gnu: Add perl-file-zglob....* gnu/packages/perl.scm (perl-file-zglob): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Alex Sassmannshausen
2016-07-02gnu: Add perl-config-ini....* gnu/packages/perl.scm (perl-config-ini): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Alex Sassmannshausen
2016-07-02gnu: Add perl-mixin-linewise....* gnu/packages/perl.scm (perl-mixin-linewise): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Alex Sassmannshausen
2016-07-02gnu: Add perl-perlio-utf8-strict....* gnu/packages/perl.scm (perl-perlio-utf8_strict): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Alex Sassmannshausen
2016-07-02gnu: Add perl-test-class-most....* gnu/packages/perl.scm (perl-test-class-most): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Alex Sassmannshausen
2016-07-02gnu: Add perl-test-class....* gnu/packages/perl.scm (perl-test-class): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Alex Sassmannshausen
2016-07-02gnu: perl-text-diff: Update perl-text-diff....* gnu/packages/perl.scm (perl-text-diff): Correct URL, update to 1.44. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Alex Sassmannshausen
2016-07-02gnu: Add midicsv....* gnu/packages/music.scm (midicsv): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> John J. Foerch
2016-07-02gnu: gimp: Fix CVE-2016-4994....* gnu/packages/patches/gimp-CVE-2016-4994.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gimp.scm (gimp): Use it. Leo Famulari
2016-07-02tests: install: Adjust to new 'marionette-service-type' interface....This is a followup to 037f9e07cd03d6894a6b5fc9a252c34d3b163962. Reported by Mark H Weaver. * gnu/tests/install.scm (%minimal-os): Pass a <marionette-configuration> object as the value for the MARIONETTE-SERVICE-TYPE. Ludovic Courtès
2016-07-01gnu: python-sphinx-repoze-autointerface: Update to 0.8....* gnu/packages/python.scm (python-sphinx-repoze-autointerface, python2-sphinx-repoze-autointerface): Update to 0.8. Leo Famulari
2016-07-01gnu: imagemagick: Update to 6.9.5-0....* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.5-0. Leo Famulari
2016-07-01gnu: python-cryptography, python-cryptography-vectors: Update to 1.3.4....* gnu/packages/python.scm (python-cryptography, python2-cryptography): Update to 1.3.4. [source]: Use pypi-uri. (python-cryptography-vectors, python2-cryptography-vectors): Update to 1.3.4. [source]: Use pypi-uri. Leo Famulari
2016-07-01gnu: rofi: Update to 1.1.0....* gnu/packages/xdisorg.scm (rofi): Update to 1.1.0. Efraim Flashner
2016-07-01gnu: libreoffice: Update to 5.1.4.2 [fixes CVE-2016-4324]....* gnu/packages/libreoffice.scm (libreoffice): Update to 5.1.4.2. [native-inputs]: Switch python to python-wrapper. [arguments]: Add '--without-doxygen' and '--disable-gtk3'. Efraim Flashner
2016-07-01gnu: orcus: Update to 0.9.2....* gnu/packages/libreoffice.scm (orcus): Update to 0.9.2. Efraim Flashner
2016-07-01gnu: vsearch: Update to 2.0.1....* gnu/packages/bioinformatics.scm (vsearch): Update to 2.0.1. Ben Woodcroft
2016-07-01gnu: Add r-glmnet....* gnu/packages/statistics.scm (r-glmnet): New variable. Ben Woodcroft
2016-06-30gnu: busybox: Use 'modify-phases'....* gnu/packages/busybox.scm (busybox)[arguments]: Use 'modify-phases'. Efraim Flashner
2016-06-30gnu: busybox: Update to 1.25.0....* gnu/packages/busybox.scm (busybox): Update to 1.25.0. [native-inputs]: Add which. Efraim Flashner
2016-06-30gnu: owncloud-client: Remove some bundled libs....* gnu/packages/owncloud.scm (owncloud-client)[source]: Add a snippet removing some of the 3rd party projects. Efraim Flashner
2016-06-30gnu: owncloud-client: Update to 2.2.2....* gnu/packages/owncloud.scm (owncloud-client): Update to 2.2.2. Efraim Flashner
2016-06-29gnu: Add python-prompt-toolkit....* gnu/packages/python.scm (python-prompt-toolkit, python2-prompt-toolkit): New variables. Signed-off-by: Leo Famulari <leo@famulari.name> Danny Milosavljevic
2016-06-29gnu: python-wcwidth: Add missing 'properties' field....This is a followup to commit a44fd439dcef88b33c00db94fb3419e097401fee. * gnu/packages/python.scm (python-wcwidth)[properties]: New field. Leo Famulari
2016-06-29gnu: ceres-solver: Propagate GLOG....* gnu/packages/maths.scm (ceres)[inputs]: Move GLOG to... [propagated-inputs]: ... here. New field. Ludovic Courtès
2016-06-29gnu: linux-initrd: Support NVMe devices....* gnu/system/linux-initrd.scm (base-initrd): Add nvme to linux-modules. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Jan Nieuwenhuizen
2016-06-29download: Use basic authentication when userinfo is present in URI....* guix/download.scm (url-fetch): Include (guix base64) module on the build-side. * guix/build/download.scm (http-fetch): Add "Authorization" header when userinfo is present in the URI. David Thompson
2016-06-29gnu: blast+: Update to 2.4.0....* gnu/packages/bioinformatics.scm (blast+): Update to 2.4.0. Ben Woodcroft
2016-06-29gnu: ceres-solver: Depend on glog....* gnu/packages/maths.scm (ceres)[arguments]: Remove -DMINIGLOG=ON. [inputs]: Add GLOG. Ludovic Courtès
2016-06-29gnu: Add glog....* gnu/packages/logging.scm (glog): New variable. Ludovic Courtès
2016-06-29gnu: node: Make sure 'npm' remains a symlink after 'patch-shebangs'....Fixes <http://bugs.gnu.org/23744>. Reported by Jovany Leandro G.C <bit4bit@riseup.net> and Jelle Licht <jlicht@fsfe.org>. * gnu/packages/node.scm (node)[arguments]: Replace 'patch-shebangs' phase. Ludovic Courtès
2016-06-29gnu: openexr: Install 'ImfStdIO.h'....* gnu/packages/graphics.scm (openexr)[source](snippet): Modify IlmImf/Makefile.in so that it installs 'ImfStdIO.h'. Ludovic Courtès
2016-06-29gnu: avrdude: Use libusb-compat....* gnu/packages/patches/avrdude-fix-libusb.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/flashing-tools.scm (avrdude)[source]: Remove patch. [inputs]: Replace "libusb" with "libusb-compat". Ricardo Wurmus
2016-06-29gnu: star: Update to 2.5.2a....* gnu/packages/bioinformatics.scm (star): Update to 2.5.2a. Ben Woodcroft
2016-06-29gnu: htslib: Update to 1.3.1....* gnu/packages/bioinformatics.scm (htslib): Update to 1.3.1. Ben Woodcroft
2016-06-28gnu: Add SEEK....* gnu/packages/bioinformatics.scm (seek): New variable. Ricardo Wurmus
2016-06-28gnu: mafft: Update to 7.299....* gnu/packages/bioinformatics.scm (mafft): Update to 7.299. Ben Woodcroft
2016-06-28Revert "gnu: qtbase: Don't propagate mesa."...This reverts commit 763a8e6e235cf464306214349dad21979f2645f0. Efraim Flashner
2016-06-28gnu: metabat: Update to 0.26.3....* gnu/packages/bioinformatics.scm (metabat): Update to 0.26.3. [arguments]: Update include and linking paths accordingly. Ben Woodcroft
2016-06-28gnu: diamond: Update to 0.8.9....* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.9. Ben Woodcroft
2016-06-28gnu: r: Add pango to inputs....* gnu/packages/statistics.scm (r)[inputs]: Remove cairo, add pango. Ricardo Wurmus
2016-06-27tests: Add Avahi and NSS-mDNS test....* gnu/tests/base.scm (%avahi-os): New variable. (run-nss-mdns-test): New procedure. (%test-nss-mdns): New variable. Ludovic Courtès
2016-06-27services: avahi: Add #:debug? parameter....* gnu/services/avahi.scm (<avahi-configuration>)[debug?]: New field. (avahi-shepherd-service): Honor it. (avahi-service): Add #:debug? and honor it. * doc/guix.texi (Networking Services): Adjust accordingly. Ludovic Courtès
2016-06-27services: avahi: Pass --daemonize and check for the PID file....This makes sure the service's 'start' finishes when avahi-daemon is ready to process requests. * gnu/services/avahi.scm (avahi-shepherd-service): Use --daemonize instead of --syslog and add #:pid-file. Ludovic Courtès
2016-06-27tests: 'marionette-service-type' nows takes a <marionette-configuration>....* gnu/tests.scm (<marionette-configuration>): New record type. (marionette-shepherd-service): Argument now is a <marionette-configuration>. (marionette-operating-system): Adjust accordingly. Add #:requirements parameter and honor it. Ludovic Courtès
2016-06-27tests: base: Add host name resolution tests....* gnu/tests/base.scm (run-basic-test)["host name resolution", "host not found"]: New tests. Ludovic Courtès
2016-06-27services: Export more service types....* gnu/services/base.scm (syslog-service-type): Export. (urandom-seed-service-type): Export. Ludovic Courtès
2016-06-27services: nscd: Wait for the PID file....* gnu/services/base.scm (nscd-shepherd-service): Pass #:pid-file. Ludovic Courtès
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