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2023-02-18gnu: r-statcheck: Update to 1.4.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-statcheck): Update to 1.4.0. [propagated-inputs]: Add r-rlang.
2023-02-18gnu: r-statnet-common: Update to 4.8.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-statnet-common): Update to 4.8.0.
2023-02-18gnu: r-network: Update to 1.18.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-network): Update to 1.18.1.
2023-02-18gnu: r-tinytex: Update to 0.44.Ricardo Wurmus
* gnu/packages/cran.scm (r-tinytex): Update to 0.44.
2023-02-18gnu: r-vctrs: Update to 0.5.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-vctrs): Update to 0.5.2.
2023-02-18gnu: r-utf8: Update to 1.2.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-utf8): Update to 1.2.3.
2023-02-18gnu: r-xfun: Update to 0.37.Ricardo Wurmus
* gnu/packages/cran.scm (r-xfun): Update to 0.37.
2023-02-18gnu: r-tsp: Update to 1.2-2.Ricardo Wurmus
* gnu/packages/cran.scm (r-tsp): Update to 1.2-2.
2023-02-18gnu: r-cli: Update to 3.6.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-cli): Update to 3.6.0.
2023-02-18gnu: r-vcd: Update to 1.4-11.Ricardo Wurmus
* gnu/packages/cran.scm (r-vcd): Update to 1.4-11.
2023-02-18gnu: r-smurf: Update to 1.1.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-smurf): Update to 1.1.4.
2023-02-18gnu: r-ggrepel: Update to 0.9.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggrepel): Update to 0.9.3. [propagated-inputs]: Add r-withr.
2023-02-18gnu: r-recipes: Update to 1.0.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-recipes): Update to 1.0.4.
2023-02-18gnu: r-broom: Update to 1.0.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-broom): Update to 1.0.3.
2023-02-18gnu: r-geometry: Update to 0.4.7.Ricardo Wurmus
* gnu/packages/cran.scm (r-geometry): Update to 0.4.7.
2023-02-18gnu: r-rpostgres: Update to 1.4.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-rpostgres): Update to 1.4.5.
2023-02-18gnu: r-timechange: Update to 0.2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-timechange): Update to 0.2.0.
2023-02-18gnu: r-progressr: Update to 0.13.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-progressr): Update to 0.13.0.
2023-02-18gnu: r-lpsolve: Update to 5.6.18.Ricardo Wurmus
* gnu/packages/cran.scm (r-lpsolve): Update to 5.6.18.
2023-02-18gnu: r-sp: Update to 1.6-0.Ricardo Wurmus
* gnu/packages/cran.scm (r-sp): Update to 1.6-0.
2023-02-18gnu: r-ff: Update to 4.0.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-ff): Update to 4.0.9.
2023-02-18gnu: r-rcpp: Update to 1.0.10.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcpp): Update to 1.0.10.
2023-02-18gnu: r-colorspace: Update to 2.1-0.Ricardo Wurmus
* gnu/packages/cran.scm (r-colorspace): Update to 2.1-0.
2023-02-18gnu: r-mapproj: Update to 1.2.11.Ricardo Wurmus
* gnu/packages/cran.scm (r-mapproj): Update to 1.2.11.
2023-02-18gnu: r-sass: Update to 0.4.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-sass): Update to 0.4.5.
2023-02-18gnu: r-curl: Update to 5.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-curl): Update to 5.0.0.
2023-02-18gnu: r-httpuv: Update to 1.6.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-httpuv): Update to 1.6.8.
2023-02-18gnu: r-astsa: Update to 2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-astsa): Update to 2.0.
2023-02-18gnu: r-ggpp: Update to 0.5.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggpp): Update to 0.5.1.
2023-02-18gnu: r-ggalluvial: Update to 0.12.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggalluvial): Update to 0.12.4.
2023-02-18gnu: r-fontawesome: Update to 0.5.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-fontawesome): Update to 0.5.0.
2023-02-18gnu: r-abn: Update to 2.7-3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-abn): Update to 2.7-3.
2023-02-18gnu: r-wgcna: Update to 1.72-1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-wgcna): Update to 1.72-1.
2023-02-18gnu: r-d3r: Update to 1.0.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-d3r): Update to 1.0.1. [source]: Delete minified JavaScript in snippet. [arguments]: Do not delete minified JavaScript here. [native-inputs]: Update hash for d3.v7.js.
2023-02-18gnu: r-sendmailr: Update to 1.4-0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-sendmailr): Update to 1.4-0. [native-inputs]: Add r-knitr.
2023-02-18gnu: Add r-gfonts.Ricardo Wurmus
* gnu/packages/cran.scm (r-gfonts): New variable.
2023-02-18gnu: r-torch: Update to 0.9.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-torch): Update to 0.9.1. [propagated-inputs]: Add r-glue.
2023-02-18gnu: liblantern: Update to 0.9.1.Ricardo Wurmus
* gnu/packages/machine-learning.scm (liblantern): Update to 0.9.1.
2023-02-18gnu: r-flexdashboard: Update to 0.6.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-flexdashboard): Update to 0.6.1. [source]: Simplify and reformat snippet. [arguments]: Remove unnecessary module import; use esbuild in 'process-javascript phase. [native-inputs]: Replace node-uglify-js with esbuild.
2023-02-18import/cran: Remove directory-needs-zlib? in favor of ↵Ricardo Wurmus
needed-libraries-in-directory. * guix/import/cran.scm (directory-needs-zlib?): Remove procedure. (source-dir->dependencies): Use needed-libraries-in-directory instead of directory-needs-zlib?.
2023-02-18import/cran: Add generic way to detect needed libraries.Ricardo Wurmus
* guix/import/cran.scm (needed-libraries-in-directory): New procedure. (libraries-pattern, packages-for-matches): New variables.
2023-02-18import/cran: Process all vignette builders.Ricardo Wurmus
* guix/import/cran.scm (needs-knitr?): Remove procedure. (vignette-builders): New procedure. (description->package): Use vignette-builders instead of needs-knitr?.
2023-02-18import/cran: Add name mapping for libjpeg.Ricardo Wurmus
* guix/import/cran.scm (transform-sysname): Add mapping from libjpeg to libjpeg-turbo.
2023-02-18import/cran: Add directory-needs-esbuild?.Ricardo Wurmus
* guix/import/cran.scm (directory-needs-esbuild?): New procedure. (source-dir->dependencies): Use it.
2023-02-18gnu: r-readods: Update to 1.8.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-readods): Update to 1.8.0. [propagated-inputs]: Add r-purrr. [description]: Use complete sentences.
2023-02-18gnu: r-liger: Rename to r-rliger.Ricardo Wurmus
Upstream changed the name to avoid a conflict with the liger package in CRAN. * gnu/packages/cran.scm (r-liger): Define as a deprecated alias for... (r-rliger): ...this new variable.
2023-02-12gnu: bcachefs-tools: Update to 0.1-16.46a6b92.Tobias Geerinckx-Rice
* gnu/packages/file-systems.scm (bcachefs-tools): Update to 0.1-16.46a6b92.
2023-02-12gnu: julia: Fix build.Tobias Geerinckx-Rice
This follows up on commit 8d8e1438ae5a2e50005b500dacd0a26be540fe69. * gnu/packages/julia.scm (julia)[arguments]: Substitute* libgit2 version. Reported by francismb <francismb@email.de>.
2023-02-12gnu: corefreq: Update to 1.95.2.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (corefreq): Update to 1.95.2.
2023-02-18gnu: komikku: Update to 1.11.1.Liliana Marie Prikler
* gnu/packages/gnome.scm (komikku): Update to 1.11.1. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>