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2017-12-19tests: Adjust php-fpm test to new nginx API....Fixes <https://bugs.gnu.org/29769>. Reported by Mark H Weaver <mhw@netris.org>. This is a followup to 8b223ceac4ff0781e95d69362875f87cff03f4d6. * gnu/tests/web.scm (%php-fpm-nginx-server-blocks): Turn 'listen' into a list. Ludovic Courtès
2017-12-19gnu: mpd: Update to 0.20.13....* gnu/packages/mpd.scm (mpd): Update to 0.20.13. Leo Famulari
2017-12-19gnu: keepassxc: Update to 2.2.4....* gnu/packages/password-utils.scm (keepassxc): Update to 2.2.4. Leo Famulari
2017-12-18gnu: GnuPG pinentry: Update to 1.1.0....* gnu/packages/gnupg.scm (pinentry-tty, pinentry-gtk2, pinentry-gnome3, pinentry-qt): Update to 1.1.0. Leo Famulari
2017-12-18gnu: linux-libre: Update to 4.14.7....* gnu/packages/linux.scm (%linux-libre-version): Update to 4.14.7. (%linux-libre-hash): Update hash. Mark H Weaver
2017-12-18gnu: linux-libre@4.9: Update to 4.9.70....* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.70. Mark H Weaver
2017-12-18gnu: linux-libre@4.4: Update to 4.4.106....* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.106. Mark H Weaver
2017-12-19gnu: termite: Update to 13....* gnu/packages/terminals.scm (termite): Update to 13. Marius Bakke
2017-12-19gnu: pcsc-lite: Update to 1.8.23....* gnu/packages/security-token.scm (pcsc-lite): Update to 1.8.23. [arguments]<#:configure-flags>: Add "--disable-libsystemd". [license]: Adjust to removed sd-daemon files. Marius Bakke
2017-12-19gnu: qemu: Update to 2.10.2....* gnu/packages/patches/qemu-CVE-2017-15118.patch, gnu/packages/patches/qemu-CVE-2017-15119.patch, gnu/packages/patches/qemu-CVE-2017-15268.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. * gnu/packages/virtualization.scm (qemu): Update to 2.10.2. [source](patches): Remove obsolete. Marius Bakke
2017-12-18gnu: libjpeg-turbo: Update to 1.5.3....* gnu/packages/image.scm (libjpeg-turbo): Update to 1.5.3. Marius Bakke
2017-12-18gnu: libsodium: Update to 1.0.16....* gnu/packages/crypto.scm (libsodium): Update to 1.0.16. Marius Bakke
2017-12-18gnu: expect: Update to 5.45.3....* gnu/packages/tcl.scm (expect): Update to 5.45.3. Marius Bakke
2017-12-18gnu: deutex: Update to 5.1.0....* gnu/packages/games.scm (deutex): Update to 5.1.0. Kei Kebreau
2017-12-18doc: Clarify treatment of the root account....* doc/guix.texi (operating-system Reference): Clarify the situation of UID 0. Ludovic Courtès
2017-12-18guix gc: '--verify=foo' is reported as an error....Fixes <https://bugs.gnu.org/29761>. Reported by Martin Castillo <castilma@uni-bremen.de>. * guix/scripts/gc.scm (argument->verify-options): New procedure. (%options) ["verify"]: Adjust to use it. * tests/guix-gc.sh: Add test. Ludovic Courtès
2017-12-18gnu: emacspeak: Update to 47.0....* gnu/packages/emacs.scm (emacspeak): Update to 47.0. [source]: Remove snippet. [arguments]: Set SHELL environment variable. Kei Kebreau
2017-12-18gnu: rsync: Patch CVE-2017-{16548,17433,17434}....* gnu/packages/rsync.scm (rsync)[source]: Add patches. [properties]: Mark CVE-2017-15994 as not relevant. * gnu/packages/patches/rsync-CVE-2017-16548.patch, gnu/packages/patches/rsync-CVE-2017-17433.patch, gnu/packages/patches/rsync-CVE-2017-17433-fix-tests.patch, gnu/packages/patches/rsync-CVE-2017-17434-pt1.patch, gnu/packages/patches/rsync-CVE-2017-17434-pt2.patch: New files. * gnu/local.mk (dist_patch_DATA): Register them. Efraim Flashner
2017-12-18gnu: psm: Update home page URL....* gnu/packages/linux.scm (psm)[home-page]: Update. [source](uri): Use it. Ludovic Courtès
2017-12-18gexp: 'computed-file' has a new #:guile parameter....* guix/gexp.scm (<computed-file>)[guile]: New field. (computed-file): Add #:guile. (computed-file-compiler): Honor 'guile'. Ludovic Courtès
2017-12-18gnu: Fix ambiguous 'zip' reference....* gnu/packages/photo.scm: Hide 'zip' from (srfi srfi-1). Ludovic Courtès
2017-12-18ui: Non-zero exit for compound '&message' and '&error-location' conditions....* guix/ui.scm (call-with-error-handling): When both 'message?' and 'error-location?' are true, add call to 'exit'. Ludovic Courtès
2017-12-18system: examples: Add a template for BeagleBone Black....* gnu/system/examples/beaglebone-black.tmpl: New file. * Makefile.am (EXAMPLES): Add it. * gnu/system/install.scm (/etc/configuration-files): Add it. Mathieu Othacehe
2017-12-18gnu: claws-mail: Update to 3.16.0....* gnu/packages/mail.scm (claws-mail): Update to 3.16.0. Tobias Geerinckx-Rice
2017-12-18services: nginx: Allow to add raw content to the server blocks....* doc/guix.texi (Web Services): Document 'raw-content'. * gnu/services/web.scm (<nginx-server-configuration>)[raw-content]: New field. (emit-nginx-server-config): Add it. Clément Lassieur
2017-12-18services: nginx: Replace 'http-port' and 'https-port' with 'listen'....* doc/guix.texi (Web Services, Version Control Services): Update accordingly. * gnu/services/certbot.scm (certbot-nginx-server-configurations): Likewise. * gnu/services/version-control.scm (%cgit-configuration-nginx): Likewise. * gnu/services/web.scm (<nginx-server-configuration>, emit-nginx-server-config): Likewise. * gnu/tests/version-control.scm (%cgit-configuration-nginx, %git-nginx-configuration): Likewise. * gnu/tests/web.scm (%nginx-servers, %php-fpm-nginx-server-blocks): Likewise. Clément Lassieur
2017-12-18gnu: r-seurat: Update to 2.1.0....* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.1.0. [propagated-inputs]: Add r-diffusionmap, r-dtw, r-ggjoy, r-hmisc, r-ica, r-mass, r-matrix, r-nmf, r-plotly, r-sdmtools, r-tidyr; remove r-plyr, r-rcppeigen, r-fastica. Ricardo Wurmus
2017-12-18gnu: Add r-diffusionmap....* gnu/packages/graph.scm (r-diffusionmap): New variable. Ricardo Wurmus
2017-12-18gnu: Add r-ggjoy....* gnu/packages/cran.scm (r-ggjoy): New variable. Ricardo Wurmus
2017-12-18gnu: Add r-ggridges....* gnu/packages/cran.scm (r-ggridges): New variable. Ricardo Wurmus
2017-12-18gnu: Add r-scatterplot3d....* gnu/packages/cran.scm (r-scatterplot3d): New variable. Ricardo Wurmus
2017-12-18gnu: Add r-sdmtools....* gnu/packages/cran.scm (r-sdmtools): New variable. Ricardo Wurmus
2017-12-18gnu: Add r-dtw....* gnu/packages/cran.scm (r-dtw): New variable. Ricardo Wurmus
2017-12-18gnu: Add r-ica....* gnu/packages/cran.scm (r-ica): New variable. Ricardo Wurmus
2017-12-18gnu: r-seurat: Fix ModularityOptimizer.jar....* gnu/packages/bioinformatics.scm (r-seurat)[arguments]: Include Main-Class attribute in manifest. Ricardo Wurmus
2017-12-18gnu: qmidiarp: Update to 0.6.5....* gnu/packages/music.scm (qmidiarp): Update to 0.6.5. Ricardo Wurmus
2017-12-18gnu: Add noise-repellent....* gnu/packages/audio.scm (noise-repellent): New variable. Ricardo Wurmus
2017-12-18gnu: Add aj-snapshot....* gnu/packages/music.scm (aj-snapshot): New variable. Ricardo Wurmus
2017-12-18gnu: Add jack-capture....* gnu/packages/music.scm (jack-capture): New variable. Ricardo Wurmus
2017-12-18gnu: Add qjackrcd....* gnu/packages/audio.scm (qjackrcd): New variable. Ricardo Wurmus
2017-12-18gnu: Add whysynth....* gnu/packages/music.scm (whysynth): New variable. Ricardo Wurmus
2017-12-18gnu: Add sonivox-eas....* gnu/packages/music.scm (sonivox-eas): New variable. Ricardo Wurmus
2017-12-18doc: Fix typo....* doc/guix.texi: remove double occurence of generations. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Martin Castillo
2017-12-18nls: Update 'hu' translation.Ludovic Courtès
2017-12-18vm: Pass the host's /dev/urandom to the guest at /dev/hwrng....* gnu/build/vm.scm (load-in-linux-vm): Use QEMU's virtio-rng-pci. * gnu/system/vm.scm (common-qemu-options): Likewise. Leo Famulari
2017-12-17gnu: openssl: Update replacement to 1.0.2n [fixes CVE-2017-{3737,3738}]....* gnu/packages/tls.scm (openssl)[replacement]: Use openssl-1.0.2n. (openssl-1.0.2m): Replace with ... (openssl-1.0.2n): ... this updated version. Update comment. Mark H Weaver
2017-12-17gnu: Add mod-wsgi....* gnu/packages/web.scm (mod-wsgi): New variable. Christopher Baines
2017-12-17gnu: system: vm: Use loose cache for 9p file system....This improves the performance of the shared store for operations involving lots of files, e.g. searching through the store. * gnu/system/vm.scm (mapping->file-system): Add cache=loose to options. Christopher Baines
2017-12-17gnu: grammalecte: Fix 'license' field....* gnu/packages/dictionaries.scm (grammalecte)[license]: Change name to 'gpl3+'. Ludovic Courtès
2017-12-17man-db: Autoload (gdbm)....Fixes 'guix pull'. Reported by ofosos on #guix. * guix/man-db.scm: Use 'module-autoload!' instead of 'module-use!'. so that (gdbm) is not loaded until we need it. Ludovic Courtès
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