| Age | Commit message (Expand) | Author |
|---|
| 2020-06-22 | gnu: jamvm: Fix to work with current gcc and glibc....* gnu/packages/java.scm (jamvm)[source]: Add patch.
(jamvm-1-bootstrap)[native-inputs]: Remove.
* gnu/packages/patches/jamvm-2.0.0-disable-branch-patching.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Marius Bakke <marius@gnu.org>
| Simon South |
| 2020-06-22 | gnu: template-glib: Update to 3.34.0....* gnu/packages/glib.scm (template-glib): Update to 3.34.0.
Signed-off-by: Marius Bakke <marius@gnu.org>
| Giacomo Leidi |
| 2020-06-22 | gnu: Add python-daemux....* gnu/packages/tmux.scm (python-daemux): New variable.
Signed-off-by: Marius Bakke <marius@gnu.org>
| Edouard Klein |
| 2020-06-22 | gnu: Add python-libtmux....* gnu/packages/tmux.scm (python-libtmux): New variable.
Signed-off-by: Marius Bakke <marius@gnu.org>
| Edouard Klein |
| 2020-06-22 | gnu: Add python-pyfiglet....* gnu/packages/python-xyz.scm (python-pyfiglet): New variable.
Signed-off-by: Marius Bakke <marius@gnu.org>
| Edouard Klein |
| 2020-06-22 | gnu: Add python-flask-restx....* gnu/packages/python-web.scm (python-flask-restx): New variable.
Signed-off-by: Marius Bakke <marius@gnu.org>
| Edouard Klein |
| 2020-06-22 | gnu: Add python-pytest-flask....* gnu/packages/python-check.scm (python-pytest-flask): New variable.
Signed-off-by: Marius Bakke <marius@gnu.org>
| Edouard Klein |
| 2020-06-22 | gnu: Add python-pytest-benchmark....* gnu/packages/python-check.scm (python-pytest-benchmark): New variable.
Signed-off-by: Marius Bakke <marius@gnu.org>
| Edouard Klein |
| 2020-06-22 | gnu: Add python-py-cpuinfo....* gnu/packages/python-xyz.scm (python-py-cpuinfo): New variable.
Signed-off-by: Marius Bakke <marius@gnu.org>
| Edouard Klein |
| 2020-06-22 | gnu: Add abe....* gnu/packages/games.scm (abe): New variable.
| Nicolas Goaziou |
| 2020-06-22 | gnu: mate: Don't propagate glib:bin....* gnu/packages/mate.scm (mate)[propagated-inputs]: Remove as the
proper fix arrived from core-updates.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| Jonathan Brielmaier |
| 2020-06-22 | gnu: mate-common: Update to 1.24.1....* gnu/packages/mate.scm (mate-common): Update to 1.24.1.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| Jonathan Brielmaier |
| 2020-06-22 | gnu: Add python-pytest-lazy-fixture....* gnu/packages/check.scm (python-pytest-lazy-fixture): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| Vinicius Monego |
| 2020-06-22 | gnu: r-with-tests, r-minimal: Update to 4.0.2....* gnu/packages/statistics.scm (r-with-tests, r-minimal): Update to 4.0.2.
| Ricardo Wurmus |
| 2020-06-22 | system: image: Remove "image-root" when building raw disk-images....The "image-root" derivation output is used as a temporary directory that is
passed to mke2fs and mkdosfs later on. By merging the creation of this
directory and the production of partition images, we can get rid of the
derivation.
As mke2fs and mkdosfs are not able to override file permissions, call those
commands with fakeroot. This way, all the image files will be owned by root,
even if image generation is done in an unprivilegded context.
* gnu/system/image.scm (system-disk-image): Merge "image-root" and
"iso9660-image" derivations so that we spare an extra derivation. Also add
"fakeroot" and its runtime dependencies to the inputs.
* gnu/build/image.scm (make-ext-image, make-vfat-image): Make sure that mke2fs
and mkdosfs are respectively called by fakeroot.
| Mathieu Othacehe |
| 2020-06-22 | gnu: gn: Update to 0.0-1794.eb997b5....* gnu/packages/build-tools.scm (gn): Update to 0.0-1794.eb997b5.
| Marius Bakke |
| 2020-06-22 | gnu: ungoogled-chromium: Update to 83.0.4103.106-0.f08ce8b [security fixes]....This fixes CVE-2020-6465, CVE-2020-6466, CVE-2020-6467, CVE-2020-6468,
CVE-2020-6469, CVE-2020-6470, CVE-2020-6471, CVE-2020-6472, CVE-2020-6473,
CVE-2020-6474, CVE-2020-6475, CVE-2020-6476, CVE-2020-6477, CVE-2020-6478,
CVE-2020-6479, CVE-2020-6480, CVE-2020-6481, CVE-2020-6482, CVE-2020-6483,
CVE-2020-6484, CVE-2020-6485, CVE-2020-6486, CVE-2020-6487, CVE-2020-6488,
CVE-2020-6489, CVE-2020-6490, CVE-2020-6491, CVE-2020-6493, CVE-2020-6494,
CVE-2020-6495, CVE-2020-6496, CVE-2020-6497, and CVE-2020-6498.
* gnu/packages/patches/ungoogled-chromium-system-jsoncpp.patch,
gnu/packages/patches/ungoogled-chromium-system-zlib.patch: New files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for 83.
(%chromium-version): Set to 83.0.4103.106.
(%ungoogled-revision): Set to f08ce8b3f1300ef0750b5d6bf967b9cbbfd9a56d.
(%gentoo-revision, %gentoo-patches, %debian-patches): New variables.
(gentoo-patch, debian-patch): New procedures.
(%chromium-origin, %ungoogled-origin): Update hashes.
(ungoogled-chromium-source): Don't apply patches from %DEBIAN-ORIGIN, but take
%GENTOO-PATCHES, %DEBIAN-PATCHES, and the local patch files.
(ungoogled-chromium)[arguments]: Remove "enable_swiftshader=false" from
#:configure-flags. Add "icu_use_data_file=false". Set CFLAGS in phase.
Remove obsolete substitution. Adjust install phase to install .so files for
ANGLE and Swiftshader.
[native-inputs]: Change from CLANG-9 to CLANG-10.
[inputs]: Replace ICU4C with ICU4C-67.
(ungoogled-chromium/wayland): Remove obsolete substitution. Add
"ozone_platform_x11=true" in #:configure-flags.
| Marius Bakke |
| 2020-06-22 | gnu: icu4c: Add 67.1....* gnu/packages/icu4c.scm (icu4c-67): New public variable.
| Marius Bakke |
| 2020-06-22 | gnu: ungoogled-chromium: Specify CPE name....* gnu/packages/chromium.scm (ungoogled-chromium)[properties]: Add CPE-NAME.
| Marius Bakke |
| 2020-06-22 | gnu: ungoogled-chromium: Remove non-free file....* gnu/packages/chromium.scm (ungoogled-chromium-source): Remove (unused) SVG
file that is licensed under a NoDerivatives license.
| Marius Bakke |
| 2020-06-22 | gnu: ungoogled-chromium: Build with ffmpeg@4.2....Fixes <https://bugs.gnu.org/41987>.
Reported by Jonathan Brielmaier <jonathan.brielmaier@web.de>.
* gnu/packages/video.scm (ffmpeg-4.2): New public variable.
* gnu/packages/chromium.scm (ungoogled-chromium)[inputs]: Change from FFMPEG
to FFMPEG-4.2.
| Marius Bakke |
| 2020-06-22 | gnu: ffmpeg: Enable rav1e on x86_64 only....Fixes <https://bugs.gnu.org/41993>.
Reported by Kurt I <gitlabcanada@runbox.com>.
* gnu/packages/video.scm (ffmpeg)[inputs]: Conditionally add RAV1E.
[arguments]: Adjust #:configure-flags accordingly.
| Marius Bakke |
| 2020-06-22 | system: image: Remove "image-root" derivation when building ISO....The "image-root" derivation output is used as a temporary directory that is
passed to GNU Xorriso later on. By merging the creation of this directory and
the production of an ISO image, we can get rid of the derivation.
* gnu/system/image.scm (system-iso9660-image): Merge "image-root" and
"iso9660-image" derivations so that we spare an extra derivation.
| Mathieu Othacehe |
| 2020-06-22 | gnu: xl2tpd: Fix build....* gnu/packages/vpn.scm (xl2tpd)[arguments]: Substitute hardcoded pppd path
instead of trying to set CFLAGS variable.
| Mathieu Othacehe |
| 2020-06-22 | gnu: python-plotly: Update to 4.8.1....But keep version 2.4.1 around for packages that still need it and for python2
support.
* gnu/packages/graph.scm (python-plotly): Update to 4.8.1.
[source]: Use git-fetch so that tests are also included.
[arguments]: Enable tests.
[home-page]: Follow redirect.
(python-plotly-2.4.1): New variable.
(python2-plotly): Inherit from python-plotly-2.4.1.
* gnu/packages/bioinformatics.scm (python-deeptools)[native-inputs]: Depend on
python-plotly-2.4.1.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Pierre Langlois |
| 2020-06-22 | gnu: Add python-xarray....From 27ec21904f769c1e8114f767972d9037e1e9f68a Mon Sep 17 00:00:00 2001
From: Pierre Langlois <pierre.langlois@gmx.com>
Date: Thu, 18 Jun 2020 00:58:02 +0200
Subject: [PATCH 4/5] gnu: Add python-xarray.
* gnu/package/python-science.scm (python-xarray): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Pierre Langlois |
| 2020-06-22 | gnu: Add python-retrying....* gnu/packages/python-xyz.scm (python-retrying): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Pierre Langlois |
| 2020-06-22 | gnu: python-pandas: Update to 1.0.5....But also keep version 0.25.3 around for packages requiring an earlier
versions, as well as version 0.24.2 for a version with python2.
* gnu/packages/python-science.scm (python-pandas): Update to 1.0.5.
[arguments]: Adapt 'patch-which phase. Add new 'prepare-x phase. Do not
delete tests that depend on "moto", they are skipped automatically.
[propagated-inputs]: Add python-jinja2.
[inputs]: Add xsel and xclip.
[native-inputs]: Add xorg-server-for-tests so we can test clipboard support.
(python-pandas-0.24): New variable.
(python2-pandas): Inherit from python-pandas-0.25.
* gnu/packages/bioinformatics.scm (python-biom-format)[propagated-inputs]:
Switch to python-pandas-0.25.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Pierre Langlois |
| 2020-06-22 | gnu: deeptools: Deprecate in favor of python-deeptools....And make sure python-deeptools's tests are running.
* gnu/packages/bioinformatics.scm (python-deeptools): Fetch source using git.
[native-inputs]: Add python-mock and python-nose.
(deeptools): Mark as deprecated.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Pierre Langlois |
| 2020-06-22 | self: Build with Guile 3.0.3....* gnu/packages/guile.scm (guile-3.0/libgc-7): Inherit from GUILE-3.0.3.
| Ludovic Courtès |
| 2020-06-22 | deduplicate: Avoid traversing directories twice....Until now, we'd call (nar-sha256 file) unconditionally. Thus, if FILE
was a directory, we would traverse it for no reason, and then call
'deduplicate' on FILE, which would again traverse it.
This change also removes redundant (mkdir-p store) calls from the loop,
and avoids 'lstat' calls by using 'scandir*'.
* guix/store/deduplication.scm (deduplicate): Add named loop. Move
'mkdir-p' outside the loop. Use 'scandir*' instead of 'scandir'. Do
not call 'nar-sha256' when FILE has type 'directory.
| Ludovic Courtès |
| 2020-06-22 | compile: Build gnu/{packages,tests}/* with '-O1'....* guix/build/compile.scm (optimization-options): Use '-O1' for the
simple case.
| Ludovic Courtès |
| 2020-06-22 | gnu: emacs-helm: Update to 3.6.3....* gnu/packages/emacs-xyz.scm (emacs-helm): Update to 3.6.3.
| Pierre Neidhardt |
| 2020-06-22 | gnu: emacs-helm-fish-completion: Update to 0.5....* gnu/packages/emacs-xyz.scm (emacs-helm-fish-completion): Update to 0.5.
| Pierre Neidhardt |
| 2020-06-22 | gnu: js8call: Fix build....* gnu/packages/radio.scm (js8call)[inputs]: Use regular hamlib.
| Guillaume Le Vaillant |
| 2020-06-22 | gnu: wsjtx: Update to 2.2.1....* gnu/packages/radio.scm (wsjtx-hamlib): Update to 2.2.1.
[arguments]: Add a 'fix-tests' phase.
(wsjtx): Update to 2.2.1.
| Guillaume Le Vaillant |
| 2020-06-22 | gnu: qgis: Disable some failing tests....* gnu/packages/geo.scm (qgis)[arguments]: Disable a few more failing tests.
| Guillaume Le Vaillant |
| 2020-06-22 | gnu: Add r-rgreat....* gnu/packages/bioconductor.scm (r-rgreat): New variable.
| Ricardo Wurmus |
| 2020-06-22 | gnu: rust-libc-0.2: Don't skip build....* gnu/packages/crates-io.scm (rust-libc-0.2)[arguments]: Don't skip
build.
| Efraim Flashner |
| 2020-06-22 | gnu: rust-libc-0.2: Update to 0.2.71....* gnu/packages/crates-io.scm (rust-libc-0.2): Update to 0.2.71.
| Efraim Flashner |
| 2020-06-22 | gnu: rust-rayon-1.3: Rename to rust-rayon-1....* gnu/packages/crates-io.scm (rust-rayon-1.3): Rename to rust-rayon-1.
(rust-criterion-0.3, rust-criterion-0.2, rust-gimli-0.18,
rust-hashbrown-0.5, rust-indexmap-1.3, rust-jpeg-decoder-0.1,
rust-nasm-rs-0.1, rust-scroll-0.9, rust-syn-1.0, rust-syn-0.15)
[arguments]: Adjust accordingly.
* gnu/packages/gnome.scm (librsvg-next)[arguments]: Same.
* gnu/packages/rust-apps.scm (tokei)[arguments]: Same.
* gnu/packages/video.scm (rav1e)[arguments]: Same.
| Efraim Flashner |
| 2020-06-22 | gnu: Remove rust-rayon-1.1....* gnu/packages/crates-io.scm (rust-rayon-1.1): Remove variable.
(rust-criterion-0.2, rust-gimli-0.18, rust-hashbrown-0.5,
rust-jpeg-decoder-0.1, rust-scroll-0.9, rust-syn-0.15)
[arguments]: Replace rust-rayon-1.1 with 1.3.
| Efraim Flashner |
| 2020-06-22 | gnu: rust-rayon-core-1.7: Rename to rust-rayon-core-1....* gnu/packages/crates-io.scm (rust-rayon-core-1.7): Rename to
rust-rayon-core-1.
(rust-criterion-0.2, rust-rayon-1.3, rust-rayon-1.1, rust-rayon-0.8)
[arguments]: Adjust accordingly.
| Efraim Flashner |
| 2020-06-22 | gnu: Remove rust-rayon-core-1.5....* gnu/packages/crates-io.scm (rust-rayon-core-1.5): Remove variable.
(rust-criterion-0.2, rust-rayon-1.1) [arguments]: Replace
rust-rayon-core-1.5 with 1.7.
| Efraim Flashner |
| 2020-06-22 | gnu: sequoia: Fix typos....* gnu/packages/sequoia.scm (sequoia)[arguments]: Move unquote next to
the expression it applies to.
| Efraim Flashner |
| 2020-06-22 | gnu: rust-regex-1.3: Rename to rust-regex-1....* gnu/packages/crates-io.scm (rust-regex-1.3): Rename to rust-regex-1.
(rust-ansi-term-0.12, rust-bindgen-0.52, rust-bindgen-0.51,
rust-bindgen-0.50, rust-bindgen-0.37, rust-bindgen-0.49, rust-clap-2,
rust-compiletest-rs-0.3, rust-console-0.9, rust-console-0.7,
rust-docopt-1.1, rust-env-logger-0.7, rust-env-logger-0.6,
rust-env-logger-0.5, rust-gimli-0.18, rust-globset-0.4,
rust-grep-cli-0.1, rust-grep-matcher-0.1, rust-grep-regex-0.1,
rust-grep-searcher-0.1, rust-ignore-0.4, rust-lalrpop-0.17,
rust-lalrpop-util-0.17, rust-locale-config-0.3, rust-localeconfig-0.2,
rust-nom-5, rust-nom-4.2, rust-once-cell-1.2, rust-proptest-0.9,
rust-proptest-0.8, rust-pulldown-cmark-0.4, rust-regex-automata-0.1,
rust-rusqlite-0.19, rust-scan-fmt-0.2, rust-syn-1.0, rust-syn-0.15,
rust-ucd-parse-0.1, rust-version-sync-0.8) [arguments]: Adjust accordingly.
* gnu/packages/gnome.scm (librsvg-next)[arguments]: Same.
* gnu/packages/rust-apps.scm (fd, ripgrep, tokei, rust-cargo-c)
[arguments]: Same.
* gnu/packages/sequoia.scm (sequoia)[arguments]: Same.
| Efraim Flashner |
| 2020-06-22 | gnu: Remove rust-regex-1.1....* gnu/packages/crates-io.scm (rust-regex-1.1): Remove variable.
(rust-bindgen-0.50, rust-bindgen-0.49, rust-clap-2,
rust-compiletest-rs-0.2, rust-console-0.7, rust-docopt-1.1,
rust-env-logger-0.7, rust-env-logger-0.6, rust-env-logger-0.5,
rust-gimli-0.18, rust-globset-0.4, rust-grep-cli-0.1,
rust-grep-matcher-0.1, rust-grep-regex-0.1, rust-grep-searcher-0.1,
rust-ignore-0.4, rust-nom-5, rust-nom-4.2, rust-once-cell-1.2,
rust-proptest-0.9, rust-proptest-0.8, rust-pulldown-cmark-0.4,
rust-regex-automata-0.1, rust-rusqlite-0.19, rust-syn-0.15,
rust-ucd-parse-0.1, rust-version-sync-0.8) [arguments]: Replace
rust-regex-1.1 with 1.3.
* gnu/packages/rust-apps.scm (ripgrep)[arguments]: Same.
| Efraim Flashner |
| 2020-06-22 | gnu: Add rust-once-cell-0.1....* gnu/packages/crates-io.scm (rust-once-cell-0.1): New variable.
| Efraim Flashner |
| 2020-06-22 | gnu: Add rust-gettext-rs-0.4....* gnu/packages/crates-io.scm (rust-gettext-rs-0.4): New variable.
| Efraim Flashner |
| 2020-06-22 | gnu: Add rust-gettext-sys-0.19....* gnu/packages/crates-io.scm (rust-gettext-sys-0.19): New variable.
| Efraim Flashner |
