| Age | Commit message (Expand) | Author |
|---|
| 2021-10-01 | gnu: emacs-org-contrib: Update description.•••* gnu/packages/emacs-xyz.scm (emacs-org-contrib): Update description according
to new repository.
| Nicolas Goaziou |
| 2021-10-01 | gnu: emacs-org: Update to 9.5.•••* gnu/packages/emacs-xyz.scm (emacs-org): Update to 9.5.
| Nicolas Goaziou |
| 2021-10-01 | gnu: emacs-org-contrib: Update to 0.2.•••* gnu/packages/emacs-xyz.scm (emacs-org-contrib): Update to 0.2.
| Nicolas Goaziou |
| 2021-10-01 | gnu: emacs-tramp: Update to 2.5.1.3.•••* gnu/packages/emacs-xyz.scm (emacs-tramp): Update to 2.5.1.3.
| Nicolas Goaziou |
| 2021-09-30 | gnu: av-98: Set 'upstream-name' property.•••* gnu/packages/web-browsers.scm (av-98)[properties]: Set ‘upstream-name’.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Xinglu Chen |
| 2021-09-30 | import: pypi: Honor the 'upstream-name' package property.•••Previously, when a PyPI package had a “-” followed by one or more digits in
its name, e.g., “AV-98”, the importer would interpret “98” as the version of
the package and thus mistake the “AV-98” package for the “av” package on PyPI.
$ ./pre-inst-env guix refresh av-98
following redirection to `https://pypi.org/pypi/av/json'...
/home/yoctocell/src/guix/gnu/packages/web-browsers.scm:914:13: av-98 would be upgraded from 1.0.1 to 8.0.3
Setting the ‘upstream-name’ property to “AV-98” would solve the problem.
$ ./pre-inst-env guix refresh av-98
/home/yoctocell/src/guix/gnu/packages/web-browsers.scm:914:13: 1.0.1 is already the latest version of av-98
* guix/import/pypi.scm (guix-package->pypi-name): Honor ‘upstream-name’
property.
(make-pypi-sexp): Set ‘upstream-name’ property when appropriate.
* tests/pypi.scm (test-json): Rename to ...
(test-json-1): ... this.
(test-json-2): New variable
("guix-package->pypi-name, honor 'upstream-name'"): New test.
("pypi->guix-package, package name contains \"-\" followed by digits"):
Likewise.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Xinglu Chen |
| 2021-09-30 | gnu: Remove python-py-bcrypt.•••* gnu/packages/python-crypto.scm (python-py-bcrypt, python2-py-bcrypt): Remove
variables.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Vinicius Monego |
| 2021-09-30 | gnu: python-passlib: Use python-bcrypt.•••py-bcrypt is unmaintained and support will be dropped in passlib 1.8. The
recommended option is bcrypt.
* gnu/packages/python-crypto.scm (python-passlib)[propagated-inputs]: Remove
python-py-bcrypt. Add python-bcrypt.
[arguments]<#:phases>: Don't return #t.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Vinicius Monego |
| 2021-09-30 | gnu: Remove python2-passlib.•••* gnu/packages/python-crypto.scm (python2-passlib): Remove variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Vinicius Monego |
| 2021-09-30 | gnu: grokmirror: Update to 2.0.11.•••* gnu/packages/version-control.scm (grokmirror): Update to 2.0.11.
[arguments]<#:phases>: Don’t return #t.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Xinglu Chen |
| 2021-09-30 | discovery: Hide Guile warnings when loading modules.•••Fixes <https://issues.guix.gnu.org/43747>.
* guix/discovery.scm (scheme-modules): Parameterize 'current-warning-port'.
| Ludovic Courtès |
| 2021-09-30 | packages: Factorize and document 'computed-origin-method'.•••The 'computed-origin-method' had been introduced to work around
limitations of the 'snippet' mechanism. The procedure was duplicated,
which made it hard to automatically detect packages using it.
* guix/packages.scm (computed-origin-method): Move procedure from...
* gnu/packages/gnuzilla.scm: ...here and...
* gnu/packages/gnuzilla.scm: ...there.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| zimoun |
| 2021-09-30 | gnu: komikku: Update to 0.34.0.•••* gnu/packages/gnome.scm (komikku): Update to 0.34.0.
| Liliana Marie Prikler |
| 2021-09-30 | gnu: Add python-pytest-repeat.•••* gnu/packages/python-check.scm (python-pytest-repeat): New variable.
| Maxim Cournoyer |
| 2021-09-30 | gnu: Add julia-documenter.•••These four variables are added in the same commit to avoid a cyclic
dependency.
* gnu/packages/julia-xyz.scm (julia-documenter,
julia-documentermarkdown, julia-documentertools): New variables.
(julia-documenter-bootstrap): New hidden variable.
| Efraim Flashner |
| 2021-09-30 | gnu: Add julia-sass.•••* gnu/packages/julia-xyz.scm (julia-sass): New variable.
| Efraim Flashner |
| 2021-09-30 | gnu: Add julia-libsass-jll.•••* gnu/packages/julia-jll.scm (julia-libsass-jll): New variable.
| Efraim Flashner |
| 2021-09-30 | gnu: Add julia-ansicoloredprinters.•••* gnu/packages/julia-xyz.scm (julia-ansicoloredprinters): New variable.
| Efraim Flashner |
| 2021-09-30 | gnu: Add julia-pycall.•••* gnu/packages/julia-xyz.scm (julia-pycall): New variable.
| Efraim Flashner |
| 2021-09-30 | gnu: Add julia-mlstyle.•••* gnu/packages/julia-xyz.scm (julia-mlstyle): New variable.
| Efraim Flashner |
| 2021-09-30 | gnu: Add julia-measurements.•••* gnu/packages/julia-xyz.scm (julia-measurements): New variable.
| Efraim Flashner |
| 2021-09-30 | gnu: Add julia-quadgk.•••* gnu/packages/julia-xyz.scm (julia-quadgk): New variable.
| Efraim Flashner |
| 2021-09-30 | gnu: r-gdsfmt: Adjust bad substitution.•••* gnu/packages/bioconductor.scm (r-gdsfmt)[source]: Include beginning-of-line
anchor in substitution regular expression.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-delayedmatrixstats: Update to 1.14.3.•••* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.14.3.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-s4vectors: Update to 0.30.1.•••* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.30.1.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-biocpkgtools: Update to 1.10.2.•••* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.10.2.
[propagated-inputs]: Remove r-rex.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-timeseriesexperiment: Update to 1.10.1.•••* gnu/packages/bioconductor.scm (r-timeseriesexperiment): Update to 1.10.1.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-gdsfmt: Update to 1.28.1.•••* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.28.1.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-cicero: Update to 1.10.1.•••* gnu/packages/bioconductor.scm (r-cicero): Update to 1.10.1.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-zinbwave: Update to 1.14.2.•••* gnu/packages/bioconductor.scm (r-zinbwave): Update to 1.14.2.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-clusterprofiler: Update to 4.0.5.•••* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.0.5.
[propagated-inputs]: Remove r-rvcheck; add r-yulab-utils.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-ggtree: Update to 3.0.4.•••* gnu/packages/bioconductor.scm (r-ggtree): Update to 3.0.4.
[propagated-inputs]: Remove r-rvcheck; add r-ggfun and r-yulab-utils.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-matrixgenerics: Update to 1.4.3.•••* gnu/packages/bioconductor.scm (r-matrixgenerics): Update to 1.4.3.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-chippeakanno: Update to 3.26.4.•••* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.26.4.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-diffbind: Update to 3.2.7.•••* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.2.7.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-genomicfeatures: Update to 1.44.2.•••* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.44.2.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-genomeinfodb: Update to 1.28.4.•••* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.28.4.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-edger: Update to 3.34.1.•••* gnu/packages/bioconductor.scm (r-edger): Update to 3.34.1.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-biocparallel: Update to 1.26.2.•••* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.26.2.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-affxparser: Update to 1.64.1.•••* gnu/packages/bioconductor.scm (r-affxparser): Update to 1.64.1.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-r-filesets: Fix build by setting HOME.•••* gnu/packages/cran.scm (r-r-filesets)[arguments]: Add build phase to set HOME
variable.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-glinternet: Update to 1.0.12.•••* gnu/packages/statistics.scm (r-glinternet): Update to 1.0.12.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-pbapply: Update to 1.5-0.•••* gnu/packages/statistics.scm (r-pbapply): Update to 1.5-0.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-rrcov: Update to 1.6-0.•••* gnu/packages/statistics.scm (r-rrcov): Update to 1.6-0.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-fastica: Update to 1.2-3.•••* gnu/packages/statistics.scm (r-fastica): Update to 1.2-3.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-sfsmisc: Update to 1.1-12.•••* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-12.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-matrixstats: Update to 0.61.0.•••* gnu/packages/statistics.scm (r-matrixstats): Update to 0.61.0.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-r-utils: Update to 2.11.0.•••* gnu/packages/statistics.scm (r-r-utils): Update to 2.11.0.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-e1071: Update to 1.7-9.•••* gnu/packages/statistics.scm (r-e1071): Update to 1.7-9.
| Ricardo Wurmus |
| 2021-09-30 | gnu: r-rngtools: Update to 1.5.2.•••* gnu/packages/statistics.scm (r-rngtools): Update to 1.5.2.
| Ricardo Wurmus |
