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2020-12-09gnu: r-annotationfilter: Update to 1.14.0.zimoun
* gnu/packages/bioinformatics.scm (r-annotationfilter): Update to 1.14.0.
2020-12-09gnu: r-tximport: Update to 1.18.0.zimoun
* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.18.0.
2020-12-09gnu: r-mutationalpatterns: Update to 3.0.1.Roel Janssen
* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 3.0.1. [native-inputs]: Add r-knitr. [propagated-inputs]: Add r-bsgenome, r-dplyr, r-ggalluvial, r-magrittr, r-purrr, r-stringr, r-tibble, and r-tidyr; remove r-reshape2 and r-summarizedexperiment.
2020-12-09gnu: r-rcas: Update to 1.16.0.zimoun
* gnu/packages/bioinformatics.scm (r-rcas): Update to 1.16.0.
2020-12-09gnu: r-bamsignals: Update to 1.22.0.zimoun
* gnu/packages/bioinformatics.scm (r-bamsignals): Update to 1.22.0.
2020-12-09gnu: r-rhtslib: Update to 1.22.0.zimoun
* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.22.0.
2020-12-09gnu: r-zlibbioc: Update to 1.36.0.zimoun
* gnu/packages/bioinformatics.scm (r-zlibbioc): Update to 1.36.0.
2020-12-09gnu: r-seqlogo: Update to 1.56.0.zimoun
* gnu/packages/bioinformatics.scm (r-seqlogo): Update to 1.56.0.
2020-12-09gnu: r-genomation: Update to 1.22.0.zimoun
* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.22.0.
2020-12-09gnu: r-seqpattern: Update to 1.22.0.zimoun
* gnu/packages/bioinformatics.scm (r-seqpattern): Update to 1.22.0.
2020-12-09gnu: r-impute: Update to 1.64.0.zimoun
* gnu/packages/bioinformatics.scm (r-impute): Update to 1.64.0.
2020-12-09gnu: r-bsgenome: Update to 1.58.0.zimoun
* gnu/packages/bioinformatics.scm (r-bsgenome): Update to 1.58.0.
2020-12-09gnu: r-topgo: Update to 2.42.0.Roel Janssen
* gnu/packages/bioinformatics.scm (r-topgo): Update to 2.42.0.
2020-12-09gnu: r-genomicfeatures: Update to 1.42.1.Roel Janssen
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.42.1.
2020-12-09gnu: r-rtracklayer: Update to 1.50.0.zimoun
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.50.0.
2020-12-09gnu: r-genomicalignments: Update to 1.26.0.zimoun
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.26.0.
2020-12-09gnu: r-variantannotation: Update to 1.36.0.zimoun
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.36.0. [propagated-inputs]: Add r-matrixgenerics.
2020-12-09gnu: r-summarizedexperiment: Update to 1.20.0.zimoun
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.20.0. [propagated-inputs]: Add r-matrixgenerics.
2020-12-09gnu: r-rsamtools: Update to 2.6.0.zimoun
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 2.6.0.
2020-12-09gnu: r-biostrings: Update to 2.58.0.zimoun
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.58.0.
2020-12-09gnu: r-biocparallel: Update to 1.24.1.Roel Janssen
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.24.1.
2020-12-09gnu: r-biomart: Update to 2.46.0.zimoun
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.46.0.
2020-12-09gnu: r-annotationdbi: Update to 1.52.0.zimoun
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.52.0.
2020-12-09gnu: r-biobase: Update to 2.50.0.zimoun
* gnu/packages/bioinformatics.scm (r-biobase): Update to 2.50.0.
2020-12-09gnu: r-genomicranges: Update to 1.42.0.zimoun
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.42.0.
2020-12-09gnu: r-limma: Update to 3.46.0.zimoun
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.46.0.
2020-12-09gnu: r-edger: Update to 3.32.0.zimoun
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.32.0.
2020-12-09gnu: r-genomeinfodb: Update to 1.26.0.zimoun
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.26.0.
2020-12-09gnu: r-bioccheck: Update to 1.26.0.zimoun
* gnu/packages/bioinformatics.scm (r-bioccheck): Update to 1.26.0.
2020-12-09gnu: r-biocstyle: Update to 2.18.0.zimoun
* gnu/packages/bioinformatics.scm (r-biocstyle): Update to 2.18.0.
2020-12-09gnu: r-biocviews: Update to 1.58.0.zimoun
* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.58.0.
2020-12-09gnu: r-grohmm: Update to 1.24.0.zimoun
* gnu/packages/bioinformatics.scm (r-grohmm): Update to 1.24.0.
2020-12-09gnu: r-systempiper: Update to 1.24.2.Roel Janssen
* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.24.2. [propagated-inputs]: Add r-iranges.
2020-12-09gnu: r-shortread: Update to 1.48.0.zimoun
* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.48.0.
2020-12-09gnu: r-gostats: Update to 2.56.0.zimoun
* gnu/packages/bioinformatics.scm (r-gostats): Update to 2.56.0.
2020-12-09gnu: r-category: Update to 2.56.0.zimoun
* gnu/packages/bioinformatics.scm (r-category): Update to 2.56.0.
2020-12-09gnu: r-gseabase: Update to 1.52.0.zimoun
* gnu/packages/bioinformatics.scm (r-gseabase): Update to 1.52.0.
2020-12-09gnu: r-rbgl: Update to 1.66.0.zimoun
* gnu/packages/bioinformatics.scm (r-rbgl): Update to 1.66.0.
2020-12-09gnu: r-annotationforge: Update to 1.32.0.zimoun
* gnu/packages/bioinformatics.scm (r-annotationforge): Update to 1.32.0.
2020-12-09gnu: r-dexseq: Update to 1.36.0.zimoun
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.36.0.
2020-12-09gnu: r-deseq2: Update to 1.30.0.zimoun
* gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.30.0.
2020-12-09gnu: r-genefilter: Update to 1.72.0.zimoun
* gnu/packages/bioinformatics.scm (r-genefilter): Update to 1.72.0.
2020-12-09gnu: r-beachmat: Update to 2.6.1.Roel Janssen
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.6.1.
2020-12-09gnu: r-ncdfflow: Fix r-rhdf5libs link.zimoun
* gnu/packages/bioconductor.scm (r-ncdfflow): [arguments]: Avoid to have a plain directory on the list of libraries to link. Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
2020-12-09gnu: r-cytoml: Fix r-rhdf5libs linking.zimoun
* gnu/packages/bioconductor.scm (r-cytoml): [arguments]: Avoid to have a plain directory on the list of libraries to link.
2020-12-09gnu: r-flowworkspace: Fix r-rhdf5libs linking.zimoun
* gnu/packages/bioconductor.scm (r-flowworkspace): [arguments]: Avoid to have a plain directory on the list of libraries to link.
2020-12-09gnu: r-hdf5array: Fix r-rhdf5libs linking.zimoun
* gnu/packages/bioconductor.scm (r-hdf5array): [arguments]: Avoid to have a plain directory on the list of libraries to link. Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
2020-12-09gnu: r-cytolib: Fix r-rhdf5libs linking.zimoun
* gnu/packages/bioconductor.scm (r-cytolib): [arguments]: Avoid to have a plain directory on the list of libraries to link. Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
2020-12-09gnu: r-rhdf5lib: Fix build.Roel Janssen
* gnu/packages/bioconductor.scm (r-rhdf5lib)[arguments]: Fix build.
2020-12-09gnu: r-rhdf5lib: Update to 1.12.0.zimoun
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.12.0.
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