| Age | Commit message (Expand) | Author |
|---|
| 2022-04-14 | gnu: r-ropls: Update to 1.26.4....* gnu/packages/bioconductor.scm (r-ropls): Update to 1.26.4.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-birewire: Update to 3.26.5....* gnu/packages/bioconductor.scm (r-birewire): Update to 3.26.5.
[propagated-inputs]: Remove r-tsne; add r-rtsne.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-biocfilecache: Update to 2.2.1....* gnu/packages/bioconductor.scm (r-biocfilecache): Update to 2.2.1.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-massspecwavelet: Update to 1.60.1....* gnu/packages/bioconductor.scm (r-massspecwavelet): Update to 1.60.1.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-atacseqqc: Update to 1.18.1....* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.18.1.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-genomicscores: Update to 2.6.1....* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.6.1.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-clusterprofiler: Update to 4.2.2....* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.2.2.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-enrichplot: Update to 1.14.2....* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.14.2.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-geoquery: Update to 2.62.2....* gnu/packages/bioconductor.scm (r-geoquery): Update to 2.62.2.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-karyoploter: Update to 1.20.3....* gnu/packages/bioconductor.scm (r-karyoploter): Update to 1.20.3.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-destiny: Update to 3.8.1....* gnu/packages/bioconductor.scm (r-destiny): Update to 3.8.1.
[native-inputs]: Add r-knitr.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-chippeakanno: Update to 3.28.1....* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.28.1.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-diffbind: Update to 3.4.11....* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.4.11.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-systempiper: Update to 2.0.8....* gnu/packages/bioconductor.scm (r-systempiper): Update to 2.0.8.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-stringdb: Update to 2.6.5....* gnu/packages/bioconductor.scm (r-stringdb): Update to 2.6.5.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-slingshot: Update to 2.2.1....* gnu/packages/bioconductor.scm (r-slingshot): Update to 2.2.1.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-rhdf5: Update to 2.38.1....* gnu/packages/bioconductor.scm (r-rhdf5): Update to 2.38.1.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-regioner: Update to 1.26.1....* gnu/packages/bioconductor.scm (r-regioner): Update to 1.26.1.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-msnbase: Update to 2.20.4....* gnu/packages/bioconductor.scm (r-msnbase): Update to 2.20.4.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-mutationalpatterns: Update to 3.4.1....* gnu/packages/bioconductor.scm (r-mutationalpatterns): Update to 3.4.1.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-limma: Update to 3.50.3....* gnu/packages/bioconductor.scm (r-limma): Update to 3.50.3.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-genomicfeatures: Update to 1.46.5....* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.46.5.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-genomeinfodb: Update to 1.30.1....* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.30.1.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-ensembldb: Update to 2.18.4....* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.18.4.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-biomart: Update to 2.50.3....* gnu/packages/bioconductor.scm (r-biomart): Update to 2.50.3.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-annotationhub: Update to 3.2.2....* gnu/packages/bioconductor.scm (r-annotationhub): Update to 3.2.2.
| Ricardo Wurmus |
| 2022-04-14 | gnu: Add r-aod....* gnu/packages/cran.scm (r-aod): New variable.
| Ricardo Wurmus |
| 2022-04-14 | gnu: r-tricycle: Move out of annotation packages....* gnu/packages/bioconductor.scm (r-tricycle): Move definition out of the
section containing annotation packages.
| Ricardo Wurmus |
| 2022-04-13 | gnu: gama: Update to 2.18....* gnu/packages/gps.scm (gama): Update to 2.18.
| Efraim Flashner |
| 2022-04-13 | gnu: idris: Fixes test failure....* gnu/packages/patches/idris-test-ffi008.patch: New file.
* gnu/packages/idris.scm (source): Use it.
* gnu/local.mk (dist_patch_DATA): Register it.
| Eric Bavier |
| 2022-04-13 | gnu: nginx: Update to 1.21.6....* gnu/packages/web.scm (nginx): Update to 1.21.6.
(nginx-documentation): Update to 1.21.6-2829-1ecf0e0526da.
| Leo Famulari |
| 2022-04-13 | gnu: Add cl-simple-routes....* gnu/packages/lisp-xyz.scm (cl-simple-routes, ecl-simple-routes,
sbcl-simple-routes): New variables.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
| Foo Chuan Wei |
| 2022-04-13 | gnu: awscli: Do not propagate inputs....* gnu/packages/python-web.scm (awscli)[propagated-inputs]: Move all inputs
from here...
[inputs]: ...to here.
| Ricardo Wurmus |
| 2022-04-13 | gnu: awscli: Use PyYAML 6....This should be fine because all uses of yaml.load supply the now mandatory
loader argument.
* gnu/packages/python-web.scm (awscli)[arguments]: Add phase
'use-recent-pyyaml.
[propagated-inputs]: Replace python-pyyaml-for-awscli with python-pyyaml.
| Ricardo Wurmus |
| 2022-04-12 | gnu: wpewebkit: Update to 2.36.0....* gnu/packages/webkit.scm (%webkit-version): New variable.
(wpewebkit): Update to 2.36.0, rewriting package to inherit from webkitgtk.
(webkitgtk)[source]: Use %webkit-version, and adjust definition to match that
of wpewebkit.
| Maxim Cournoyer |
| 2022-04-12 | gnu: webkitgtk: Update to 2.36.0 and enable extra features....* gnu/packages/webkit.scm (webkitgtk): Update to 2.36.0.
[source]: Remove the webkitgtk-bind-all-fonts.patch and
webkitgtk-canonicalize-paths.patch patches.
[arguments]: Use gexp.
[tests?]: Update comment.
[build-type]: Add explanatory comment.
[configure-flags]: Enable gamepad support, remove nonexistent
USE_SYSTEMD option and enable mini-browser.
[phases]{do-not-disable-new-dtags}: New phase.
{help-cmake-find-elogind}: Likewise.
{patch-gtk-doc-scan}: Simplify to avoid for-each. Locate docbookx.dtd via
search-input-file.
{embed-absolute-wpebackend-reference}: Use search-input-file.
[native-inputs]: Use new style.
[inputs]: Likewise. Add elogind and libmanette.
[description]: Adjust indentation.
(webkitgtk-with-libsoup2): Re-format comment, fixing spacing.
[configure-flags]: Use gexp.
[propagated-inputs]: Use modify-inputs to replace libsoup with
libsoup-minimal-2.
* gnu/packages/patches/webkitgtk-bind-all-fonts.patch: Delete file.
* gnu/packages/patches/webkitgtk-canonicalize-paths.patch: Likewise.
* gnu/local.mk: De-register them.
| Maxim Cournoyer |
| 2022-04-12 | gnu: woff2: Propagate brotli....* gnu/packages/fontutils.scm (woff2)[phases]: Delete trailing #t.
[inputs]: Move brotli to ...
[propagated-inputs]: ... here.
| Maxim Cournoyer |
| 2022-04-12 | gnu: linux-libre 4.9: Update to 4.9.310....* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.310.
(linux-libre-4.9-pristine-source): Update hash.
| Leo Famulari |
| 2022-04-12 | gnu: Add smtpmail....* gnu/packages/mail.scm (smtpmail): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| terramorpha |
| 2022-04-12 | gnu: Add librseq....* gnu/packages/engineering.scm (librseq): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Olivier Dion |
| 2022-04-12 | shepherd: Add #:supplementary-groups....To support the argument introduced in Shepherd 0.9.0 when defining
container-bound services.
* gnu/build/shepherd.scm (exec-command*)
(make-forkexec-constructor/container): Add '#:supplementary-groups'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Leo Nikkilä |
| 2022-04-12 | home: shepherd: Prevent launching the second instance....Fixes <https://issues.guix.gnu.org/54545>.
* gnu/home/services/shepherd.scm (launch-shepherd-gexp): Launch shepherd
if and only if its socket file does not already exist.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Andrew Tropin |
| 2022-04-12 | gnu: python-moto: Update to 3.1.4....* gnu/packages/python-xyz.scm (python-moto): Update to 3.1.4.
[arguments]: Adjust disabled tests.
[native-inputs]: Remove python-parameterized; add python-graphql-core.
[propagated-inputs]: Remove python-boto, python-idna, python-mock, and
python-six; add python-importlib-metadata and python-markupsafe.
| Ricardo Wurmus |
| 2022-04-12 | gnu: awscli: Use older version of botocore....* gnu/packages/python-web.scm (awscli)[propagated-inputs]: Replace
python-botocore with python-botocore-for-awscli.
| Ricardo Wurmus |
| 2022-04-12 | gnu: python-botocore: Update to 1.24.35....* gnu/packages/python-xyz.scm (python-botocore): Update to 1.24.35.
| Ricardo Wurmus |
| 2022-04-12 | gnu: python-boto3: Update to 1.21.35....* gnu/packages/python-xyz.scm (python-boto3): Update to 1.21.35.
[arguments]: Override 'check phase.
| Ricardo Wurmus |
| 2022-04-12 | gnu: Add python-botocore-for-awscli....* gnu/packages/python-xyz.scm (python-botocore-for-awscli): New variable.
| Ricardo Wurmus |
| 2022-04-12 | gnu: awscli: Use older pyyaml....* gnu/packages/python-web.scm (awscli)[propagated-inputs]: Replace
python-pyyaml with python-pyyaml-for-awscli.
| Ricardo Wurmus |
| 2022-04-12 | gnu: Add python-pyyaml-for-awscli....* gnu/packages/python-xyz.scm (python-pyyaml-for-awscli): New variable.
| Ricardo Wurmus |
| 2022-04-12 | services: Replace murmur-service-type with mumble-server-service-type....* gnu/services/telephony.scm (murmur-configuration, make-murmur-configuration)
(murmur-configuration?, murmur-configuration-package)
(murmur-configuration-user, murmur-configuration-group)
(murmur-configuration-port, murmur-configuration-welcome-text)
(murmur-configuration-server-password)
(murmur-configuration-max-users)
(murmur-configuration-max-user-bandwidth)
(murmur-configuration-database-file)
(murmur-configuration-log-file, murmur-configuration-pid-file)
(murmur-configuration-autoban-attempts)
(murmur-configuration-autoban-timeframe)
(murmur-configuration-autoban-time)
(murmur-configuration-opus-threshold)
(murmur-configuration-channel-nesting-limit)
(murmur-configuration-channelname-regex)
(murmur-configuration-username-regex)
(murmur-configuration-test-message-length)
(murmur-configuration-image-message-length)
(murmur-configuration-cert-required?)
(murmur-configuration-remember-channel?)
(murmur-configuration-allow-html?)
(murmur-configuration-allow-ping?)
(murmur-configuration-bonjour?)
(murmur-configuration-send-version?)
(murmur-configuration-log-days)
(murmur-configuration-obfuscate-ips?)
(murmur-configuration-ssl-cert murmur-configuration-ssl-key)
(murmur-configuration-ssl-dh-params murmur-configuration-ssl-ciphers)
(murmur-configuration-public-registration)
(murmur-configuration-file)
(murmur-public-registration-configuration)
(make-murmur-public-registration-configuration)
(murmur-public-registration-configuration?)
(murmur-public-registration-configuration-name)
(murmur-public-registration-configuration-url)
(murmur-public-registration-configuration-password)
(murmur-public-registration-configuration-hostname)
(murmur-service-type): Add deprecation alias and rename to ...
(mumble-server-configuration, make-mumble-server-configuration)
(mumble-server-configuration?, mumble-server-configuration-package)
(mumble-server-configuration-user, mumble-server-configuration-group)
(mumble-server-configuration-port, mumble-server-configuration-welcome-text)
(mumble-server-configuration-server-password)
(mumble-server-configuration-max-users)
(mumble-server-configuration-max-user-bandwidth)
(mumble-server-configuration-database-file)
(mumble-server-configuration-log-file, mumble-server-configuration-pid-file)
(mumble-server-configuration-autoban-attempts)
(mumble-server-configuration-autoban-timeframe)
(mumble-server-configuration-autoban-time)
(mumble-server-configuration-opus-threshold)
(mumble-server-configuration-channel-nesting-limit)
(mumble-server-configuration-channelname-regex)
(mumble-server-configuration-username-regex)
(mumble-server-configuration-test-message-length)
(mumble-server-configuration-image-message-length)
(mumble-server-configuration-cert-required?)
(mumble-server-configuration-remember-channel?)
(mumble-server-configuration-allow-html?)
(mumble-server-configuration-allow-ping?)
(mumble-server-configuration-bonjour?)
(mumble-server-configuration-send-version?)
(mumble-server-configuration-log-days)
(mumble-server-configuration-obfuscate-ips?)
(mumble-server-configuration-ssl-cert mumble-server-configuration-ssl-key)
(mumble-server-configuration-ssl-dh-params) (mumble-server-configuration-ssl-ciphers)
(mumble-server-configuration-public-registration)
(mumble-server-configuration-file)
(mumble-server-public-registration-configuration)
(make-mumble-server-public-registration-configuration)
(mumble-server-public-registration-configuration?)
(mumble-server-public-registration-configuration-name)
(mumble-server-public-registration-configuration-url)
(mumble-server-public-registration-configuration-password)
(mumble-server-public-registration-configuration-hostname)
(mumble-server-service-type): ... these.
* doc/guix.texi ("Murmur (VoIP server)"): Rename to ...
("Mumble server"): ... this. Adjust documentation accordingly.
| Liliana Marie Prikler |
