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2021-03-09gnu: r-fftwtools: Update to 0.9-11.Ricardo Wurmus
* gnu/packages/cran.scm (r-fftwtools): Update to 0.9-11. [native-inputs]: Add pkg-config.
2021-03-09gnu: r-ouch: Update to 2.15-1.Ricardo Wurmus
* gnu/packages/cran.scm (r-ouch): Update to 2.15-1.
2021-03-09gnu: r-activity: Update to 1.3.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-activity): Update to 1.3.1.
2021-03-09gnu: r-rgl: Update to 0.105.22.Ricardo Wurmus
* gnu/packages/cran.scm (r-rgl): Update to 0.105.22.
2021-03-09gnu: r-rcppparallel: Update to 5.0.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcppparallel): Update to 5.0.3.
2021-03-09gnu: r-mvabund: Update to 4.1.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-mvabund): Update to 4.1.9.
2021-03-09gnu: r-gert: Update to 1.2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-gert): Update to 1.2.0.
2021-03-09gnu: r-labelled: Update to 2.8.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-labelled): Update to 2.8.0. [propagated-inputs]: Remove r-pillar; add r-stringr.
2021-03-09gnu: r-doby: Update to 4.6.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-doby): Update to 4.6.9.
2021-03-09gnu: r-deriv: Update to 4.1.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-deriv): Update to 4.1.3.
2021-03-09gnu: r-insight: Update to 0.13.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-insight): Update to 0.13.1.
2021-03-09gnu: r-officer: Update to 0.3.17.Ricardo Wurmus
* gnu/packages/cran.scm (r-officer): Update to 0.3.17.
2021-03-09gnu: r-rdpack: Update to 2.1.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-rdpack): Update to 2.1.1. [propagated-inputs]: Remove r-gbrd.
2021-03-09gnu: r-rstatix: Update to 0.7.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-rstatix): Update to 0.7.0.
2021-03-09gnu: r-ggsignif: Update to 0.6.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggsignif): Update to 0.6.1.
2021-03-09gnu: r-renv: Update to 0.13.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-renv): Update to 0.13.0.
2021-03-09gnu: r-rastervis: Update to 0.50.Ricardo Wurmus
* gnu/packages/cran.scm (r-rastervis): Update to 0.50. [propagated-inputs]: Add r-terra.
2021-03-09gnu: r-promises: Update to 1.2.0.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-promises): Update to 1.2.0.1.
2021-03-09gnu: r-rio: Update to 0.5.26.Ricardo Wurmus
* gnu/packages/cran.scm (r-rio): Update to 0.5.26. [native-inputs]: Add r-knitr.
2021-03-09gnu: r-tinytex: Update to 0.30.Ricardo Wurmus
* gnu/packages/cran.scm (r-tinytex): Update to 0.30.
2021-03-09gnu: r-pillar: Update to 1.5.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-pillar): Update to 1.5.1. [native-inputs]: Add r-knitr.
2021-03-09gnu: r-argparser: Update to 0.7.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-argparser): Update to 0.7.1.
2021-03-09gnu: r-cli: Update to 2.3.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-cli): Update to 2.3.1.
2021-03-09gnu: r-broom: Update to 0.7.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-broom): Update to 0.7.5.
2021-03-09gnu: r-ipred: Update to 0.9-10.Ricardo Wurmus
* gnu/packages/cran.scm (r-ipred): Update to 0.9-10.
2021-03-09gnu: r-energy: Update to 1.7-8.Ricardo Wurmus
* gnu/packages/cran.scm (r-energy): Update to 1.7-8. [propagated-inputs]: Add r-gsl.
2021-03-09gnu: r-rmpi: Update to 0.6-9.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-rmpi): Update to 0.6-9.1.
2021-03-09gnu: r-proxy: Update to 0.4-25.Ricardo Wurmus
* gnu/packages/cran.scm (r-proxy): Update to 0.4-25.
2021-03-09gnu: r-ggally: Update to 2.1.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggally): Update to 2.1.1.
2021-03-09gnu: r-ffbase: Update to 0.13.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-ffbase): Update to 0.13.3.
2021-03-09gnu: r-pkgload: Update to 1.2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-pkgload): Update to 1.2.0.
2021-03-09gnu: r-ps: Update to 1.6.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-ps): Update to 1.6.0.
2021-03-09gnu: r-partykit: Update to 1.2-13.Ricardo Wurmus
* gnu/packages/cran.scm (r-partykit): Update to 1.2-13.
2021-03-09gnu: r-rticles: Update to 0.19.Ricardo Wurmus
* gnu/packages/cran.scm (r-rticles): Update to 0.19.
2021-03-09gnu: r-waldo: Update to 0.2.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-waldo): Update to 0.2.5.
2021-03-09gnu: r-cachem: Update to 1.0.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-cachem): Update to 1.0.4.
2021-03-09gnu: r-wgcna: Update to 1.70-3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-wgcna): Update to 1.70-3.
2021-03-09gnu: Add r-terra.Ricardo Wurmus
* gnu/packages/cran.scm (r-terra): New variable.
2021-03-09gnu: Add r-ggtext.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggtext): New variable.
2021-03-09gnu: Add r-gridtext.Ricardo Wurmus
* gnu/packages/cran.scm (r-gridtext): New variable.
2021-03-09gnu: Add r-palmerpenguins.Ricardo Wurmus
* gnu/packages/cran.scm (r-palmerpenguins): New variable.
2021-03-09gnu: Add r-rstpm2.Ricardo Wurmus
* gnu/packages/cran.scm (r-rstpm2): New variable.
2021-03-09gnu: Add r-fastghquad.Ricardo Wurmus
* gnu/packages/cran.scm (r-fastghquad): New variable.
2021-03-09gnu: evisum: Update to 0.5.11.Efraim Flashner
* gnu/packages/enlightenment.scm (evisum): Update to 0.5.11.
2021-03-09gnu: vtk: Fix build failure.Felix Gruber
* gnu/packages/image-processing.scm (vtk): Fix build failure. [source]: Add patch to fix build failure with recent versions of freetype. * gnu/packages/patches/vtk-fix-freetypetools-build-failure.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-03-09gnu: ruby-pstree: Update to 0.3.0.Efraim Flashner
* gnu/packages/ruby.scm (ruby-pstree): Update to 0.3.0.
2021-03-09weather: Call lookup-narinfos with a custom progress reporter.Christopher Baines
This means there's a useful progress bar when running guix weather. * guix/scripts/weather.scm (report-server-coverage): Pass #:make-progress-reporter to lookup-narinfos.
2021-03-09guix: substitutes: Make progress reporting configurable.Christopher Baines
Rather than always outputting to (current-error-port) in lookup-narinfos (which is called from within lookup-narinfos/diverse), take a procedure which should return a progress reporter, and defer any output to that. As this is now general purpose code, make the default behaviour to output nothing. Maintain the current behaviour of the substitute script by moving the progress reporter implementation there, and passing it in when calling lookup-narinfos/diverse. These changes should be generally useful, but I'm particularly looking at getting guix weather to do progress reporting differently, with this new flexibility. * guix/substitutes.scm (fetch-narinfos): Take a procedure to make a progress-reporter, and use that rather than the hardcoded behaviour. (lookup-narinfos): Add #:make-progress-reporter keyword argument, and pass this through to fetch-narinfos. (lookup-narinfos/diverse): Add a #:make-progress-reporter keyword argument, and pass this through to lookup-narinfos. * guix/scripts/substitute.scm (process-query): Pass a progress-reporter to lookup-narinfos/diverse.
2021-03-09gnu: emacs-php-mode: Update to 1.24.0.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-php-mode): Update to 1.24.0. [arguments]: Include "lisp/" directory, and add it to load path before byte-compiling.
2021-03-09gnu: Rename "t" to "t-todo-manager".Raghav Gururajan
* gnu/packages/task-management.scm (t): Rename to t-todo-manager. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
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