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2016-01-20import: Add Bioconductor importer and updater....* guix/import/cran.scm (%bioconductor-updater, latest-bioconductor-release, bioconductor-package?): New procedures. (cran->guix-package): Support repositories other than CRAN. (%bioconductor-url, %bioconductor-svn-url): New variables. (description->package): Update signature to distinguish between packages from different repositories. (latest-release): Rename procedure ... (latest-cran-release): ... to this. (cran-package?): Do not assume all R packages are available on CRAN. * tests/cran.scm: Update tests. * guix/scripts/import/cran.scm: Add "--archive" option and default to CRAN. * guix/scripts/refresh.scm (%updaters): Add "%bioconductor-updater". * doc/guix.texi: Document Bioconductor importer and updater. Ricardo Wurmus
2016-01-20gnu: enlightenment: Update to 0.20.3....* gnu/packages/enlightenment.scm (enlightenment): Update to 0.20.3. Efraim Flashner
2016-01-20gnu: libshout: Update to 2.4.1....* gnu/packages/xiph.scm (libshout): Update to 2.4.1. Efraim Flashner
2016-01-20gnu: opusfile: Update to 0.7....* gnu/packages/xiph.scm (opusfile): Update to 0.7. Efraim Flashner
2016-01-20gnu: opus: Update to 1.1.2....* gnu/packages/xiph.scm (opus): Update to 1.1.2. Efraim Flashner
2016-01-19gnu: lilypond: Double 'max-silent-time'....Suggested by Mark H Weaver <mhw@netris.org>. * gnu/packages/music.scm (lilypond)[properties]: New field. Ludovic Courtès
2016-01-19hydra: Honor the 'max-silent-time' package property....Suggested by Mark H Weaver <mhw@netris.org>. * build-aux/hydra/gnu-system.scm (package->alist): Add 'max-silent-time' pair. Ludovic Courtès
2016-01-19guix build: Add '--keep-going'....* guix/scripts/build.scm (show-build-options-help) (%standard-build-options): Add --keep-going. * guix/scripts/build.scm (set-build-options-from-command-line): Honor it. * doc/guix.texi (Invoking guix build): Document it. Ludovic Courtès
2016-01-19derivations: Add test in keep-going mode....* tests/derivations.scm ("derivation fails but keep going"): New test. Ludovic Courtès
2016-01-19gnu: fdm: Adjust license link to point to web-accessible copy of command.c...* gnu/packages/mail.scm (fdm): Adjusted license field Christopher Allan Webber
2016-01-18gnu: Add fdm....* gnu/packages/mail.scm (fdm): New variable. Christopher Allan Webber
2016-01-18gnu: Add linux-libre-4.2.5...* gnu/packages/linux.scm (linux-libre-4.2.5): New variable. Christopher Allan Webber
2016-01-18build: Remove traces of 'NIX_SETUID_HELPER'....This is a followup to 0919f5f4. * test-env.in: Remove occurrences of 'NIX_SETUID_HELPER'. Ludovic Courtès
2016-01-18gnu: mpv: Update to 0.15.0....* gnu/packages/video.scm (mpv): Update to 0.15.0. Efraim Flashner
2016-01-18gnu: magit: Update to 2.4.0....* gnu/packages/emacs.scm (magit): Update to 2.4.0. Alex Kost
2016-01-18gnu: sxiv: Update to 1.3.2....* gnu/packages/sxiv.scm (sxiv): Update to 1.3.2. Alex Kost
2016-01-18gnu: manaplus: Update to 1.6.1.16....* gnu/packages/games.scm (manaplus): Update to 1.6.1.16. Alex Kost
2016-01-18doc: Document 'http_proxy'....* doc/guix.texi (Build Environment Setup, Substitutes): Document 'http_proxy'. Ludovic Courtès
2016-01-18derivations: Add test for #:leaked-env-vars....* tests/derivations.scm ("derivation #:leaked-env-vars"): New test. Ludovic Courtès
2016-01-18doc: Explain how to run a subset of the tests....* doc/guix.texi (Running the Test Suite): Explain 'TESTS'. Ludovic Courtès
2016-01-18emacs: Add 'guix-search-by-name'....* emacs/guix-ui-package.el (guix-search-by-name): New command. * doc/emacs.texi (Emacs Commands): Document it. Alex Kost
2016-01-18emacs: Rename 'guix-search-by-name' to 'guix-packages-by-name'....* emacs/guix-ui-package.el (guix-search-by-name): Rename to... (guix-packages-by-name): ... this. Complete package name. * doc/emacs.texi (Emacs Commands): Likewise. Alex Kost
2016-01-18python2-jsonschema: Add python2-functools32 to inputs....* gnu/packages/python.scm (python2-jsonschema)[inputs]: Add python2-functools32. (python2-wheel)[native-inputs]: Specify python2-jsonschema. Add python2-functools32. (python2-requests)[propagated-inputs]: Specify python2-wheel. (python2-ipython)[inputs]: Specify python2-jsonschema, python2-requests. (python2-rauth)[propagated-inputs]: Specify python2-requests. * gnu/packages/openstack.scm (python2-requests-mock)[propagated-inputs]: Specify python2-requests. (python2-tempest-lib)[propagated-inputs]: Specify python2-jsonschema. (python2-oslosphinx)[propagated-inputs]: Specify python2-requests. (python2-keystoneclient)[porpagated-inputs]: Specify python2-requests. [native-inputs]: Specify python2-oslosphinx, python2-requests-mock, python2-tempest-lib. (python2-swiftclient)[propagated-inputs]: Specify python2-requests, python2-oslosphinx. Efraim Flashner
2016-01-18gnu: datamash: Update to 1.1.0....* gnu/packages/datamash.scm (datamash): Update to 1.1.0. Efraim Flashner
2016-01-18build: Speed up .go compilation....* build-aux/compile-all.scm: New file. * Makefile.am (EXTRA_DIST): Add it. (%.go, make-go): New rules. Taylan Ulrich Bayırlı/Kammer
2016-01-18gnu: mariadb: Update to 10.0.23....* gnu/packages/databases.scm (mariadb): Update to 10.0.23. Mark H Weaver
2016-01-17gnu: rsync: Update to 3.1.2....* gnu/packages/rsync.scm (rsync): Update to 3.1.2. Mark H Weaver
2016-01-17gnu: solfege: Build scores with Lilypond....* gnu/packages/music.scm (solfege)[inputs]: Add "lilypond". Ricardo Wurmus
2016-01-17gnu: bristol: Remove SSE flags on platforms other than x86_64 and i686....* gnu/packages/music.scm (bristol)[arguments]: Add phase "remove-sse-flags" to remove unsupported optimizations on platforms other than x86_64 and i686. Ricardo Wurmus
2016-01-17linux-initrd: Remove "usbkbd" from the default set of modules....Reported by Ricardo Wurmus <rekado@elephly.net> at <http://debbugs.gnu.org/cgi/bugreport.cgi?bug=20433#39>. * gnu/system/linux-initrd.scm (base-initrd): Remove "usbkbd". Ludovic Courtès
2016-01-17gnu: Add git-annex-remote-hubic....* gnu/packages/version-control.scm (git-annex-remote-hubic): New variable. Efraim Flashner
2016-01-17gnu: Add python-urllib3....* gnu/packages/python.scm (python-urllib3, python2-urllib3): New variables. Efraim Flashner
2016-01-17gnu: python-wheel: Clarify description....* gnu/packages/python.scm (python-wheel): Do it. Efraim Flashner
2016-01-17gnu: python-pytest-cov: Clarify description....* gnu/packages/python.scm (python-pytest-cov): Do it. Efraim Flashner
2016-01-17gnu: Add python2-functools32....* gnu/packages/python.scm (python2-functools32): New variable. Efraim Flashner
2016-01-17gnu: Add python-pyasn1-modules....* gnu/packages/python.scm (python-pyasn1-modules) (python2-pyasn1-modules): New variables. Efraim Flashner
2016-01-17gnu: Add python-rauth....* gnu/packages/python.scm (python-rauth, python2-rauth): New variables. Efraim Flashner
2016-01-17gnu: Add python-swiftclient....* gnu/packages/openstack.scm (python-swiftclient, python2-swiftclient): New variables. Efraim Flashner
2016-01-17gnu: Add python-futures....* gnu/packages/python.scm (python-futures, python2-futures): New variables. Efraim Flashner
2016-01-17gnu: Add python-keystoneclient....* gnu/packages/openstack.scm (python-keystoneclient) (python2-keystoneclient): New variables. Efraim Flashner
2016-01-17gnu: vmpk: Update to 0.6.2a....* gnu/packages/music.scm (vmpk): Update to 0.6.2a. Ricardo Wurmus
2016-01-17gnu: drumstick: Update to 1.0.2....* gnu/packages/music.scm (drumstick): Update to 1.0.2. Ricardo Wurmus
2016-01-17gnu: mpv: Add features....* gnu/packages/video.scm (mpv)[inputs]: Add libvdpau. [arguments]: Add gpl3 and zsh completion flags. Efraim Flashner
2016-01-17gnu: Add vdpauinfo....* gnu/packages/video.scm (vdpauinfo): New variable. Efraim Flashner
2016-01-17gnu: Add libvdpau....* gnu/packages/video.scm (libvdpau): New variable. Efraim Flashner
2016-01-17gnu: Add autojump....* gnu/packages/admin.scm (autojump): New variable. Eric Bavier
2016-01-17gnu: hevea: Update to 2.28....* gnu/packages/ocaml.scm (hevea): Update to 2.28. [arguments]: Add 'patch-/bin/sh phase. Eric Bavier
2016-01-17gnu: unison: Add "doc" output....* gnu/packages/ocaml.scm (unison)[source]: Use svn-fetch with snippet. [outputs]: New field. [native-inputs]: Add ghostscript, texlive, hevea, and lynx. [arguments]: Add 'install-doc phase. Eric Bavier
2016-01-16gnu: samtools-0.1: Adapt to changes in "samtools" variable....* gnu/packages/bioinformatics.scm (samtools-0.1)[arguments]: Add "LIBCURSES" make flag; delete "configure" phase; disable tests outside of "substitute-keyword-arguments". Ricardo Wurmus
2016-01-16doc: Document command-line options honored by the initrd....* doc/guix.texi (Initial RAM Disk): Document kernel command-line options. Ludovic Courtès
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